Click here to switch to the map view.

The map label for this gene is fimA [C]

Identifier: 29142712

GI number: 29142712

Start: 2384470

End: 2385024

Strand: Reverse

Name: fimA [C]

Synonym: t2320

Alternate gene names: 29142712

Gene position: 2385024-2384470 (Counterclockwise)

Preceding gene: 29142716

Following gene: 29142711

Centisome position: 49.77

GC content: 54.95

Gene sequence:

>555_bases
ATGAAACATAAATTAATGACCTCTACTATTGCGAGTCTGATGTTTGTCGCTGGCGCAGCGGTTGCGGCTGATCCTACTCC
GGTGAGCGTGAGCGGCGGTACTATTCATTTCGAAGGTAAACTGGTTTATGCAGCCTGTGCCGTTAGCACTAAATCCGCCG
ATCAAACGGTGACGCTGGGTCAATACCGTACCGCCAGCTTTACGGCGATTGGTGATACGACCGCGCAGGTGCCTTTCTCC
ATCGTCCTGAATGACTGCGATCCAAAAGTGGCGGCCACCGCTGCCGTGGCTTTCTCTGGTCAGGCAGATAACACCAACAC
TAATTTGCTGGCGGTCTCCTCTGCGGACAATAGCACTACCGCAACCGGCGTCGGGATTGAGATTCTTGATAACACCTCCT
CACCGTTGAAGCCGGACGGCGCGACCTTCTCGGCGAAGCAGGCGCTGGTTGAAGGCACCAATACGCTGCGTTTTACCGCA
CGCTATAAGGCAACCGCCGCCGCGACGCCAGGCCAGGCTAATGCCGACGCCACCTTTATCATGAAATACGAATAA

Upstream 100 bases:

>100_bases
CAGGATGCAGAGATAACTTTTCTGACATGCTATGTCGATAATAATTCAAACGGAGCCGACAGGATATCGAAACCGGGTGT
GTGTAATTCAAGGAAAATCC

Downstream 100 bases:

>100_bases
TCCCGTCAGGGAACGCCAGGGAAGGGAGGCGTCTCAACGGAAGAGGCTATCGGGGATAAAAGAGAACATAGCAGATGATA
AGGAAAGGCGCGGCGCTAGT

Product: Type-1 fimbrial protein subunit A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MKHKLMTSTIASLMFVAGAAVAADPTPVSVSGGTIHFEGKLVYAACAVSTKSADQTVTLGQYRTASFTAIGDTTAQVPFS
IVLNDCDPKVAATAAVAFSGQADNTNTNLLAVSSADNSTTATGVGIEILDNTSSPLKPDGATFSAKQALVEGTNTLRFTA
RYKATAAATPGQANADATFIMKYE

Sequences:

>Translated_184_residues
MKHKLMTSTIASLMFVAGAAVAADPTPVSVSGGTIHFEGKLVYAACAVSTKSADQTVTLGQYRTASFTAIGDTTAQVPFS
IVLNDCDPKVAATAAVAFSGQADNTNTNLLAVSSADNSTTATGVGIEILDNTSSPLKPDGATFSAKQALVEGTNTLRFTA
RYKATAAATPGQANADATFIMKYE
>Mature_184_residues
MKHKLMTSTIASLMFVAGAAVAADPTPVSVSGGTIHFEGKLVYAACAVSTKSADQTVTLGQYRTASFTAIGDTTAQVPFS
IVLNDCDPKVAATAAVAFSGQADNTNTNLLAVSSADNSTTATGVGIEILDNTSSPLKPDGATFSAKQALVEGTNTLRFTA
RYKATAAATPGQANADATFIMKYE

Specific function: Fimbriae (Also Called Pili), Polar Filaments Radiating From The Surface Of The Bacterium To A Length Of 0.5-1.5 Micrometers And Numbering 100-300 Per Cell, Enable Bacteria To Colonize The Epithelium Of Specific Host Organs (By Similarity). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI87081753, Length=156, Percent_Identity=70.5128205128205, Blast_Score=199, Evalue=8e-53,
Organism=Escherichia coli, GI1790769, Length=156, Percent_Identity=57.0512820512821, Blast_Score=143, Evalue=5e-36,
Organism=Escherichia coli, GI87082421, Length=187, Percent_Identity=32.620320855615, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1786746, Length=185, Percent_Identity=34.0540540540541, Blast_Score=81, Evalue=4e-17,
Organism=Escherichia coli, GI1790773, Length=187, Percent_Identity=34.2245989304813, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787781, Length=153, Percent_Identity=34.640522875817, Blast_Score=77, Evalue=5e-16,
Organism=Escherichia coli, GI1787174, Length=162, Percent_Identity=32.0987654320988, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI87081804, Length=185, Percent_Identity=29.1891891891892, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1789422, Length=186, Percent_Identity=30.1075268817204, Blast_Score=60, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18793; Mature: 18793

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHKLMTSTIASLMFVAGAAVAADPTPVSVSGGTIHFEGKLVYAACAVSTKSADQTVTLG
CCCCHHHHHHHHHHHHHCCCEECCCCCEEECCCEEEECCEEEEEEEEECCCCCCCEEEEC
QYRTASFTAIGDTTAQVPFSIVLNDCDPKVAATAAVAFSGQADNTNTNLLAVSSADNSTT
CEECEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCE
ATGVGIEILDNTSSPLKPDGATFSAKQALVEGTNTLRFTARYKATAAATPGQANADATFI
EEEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCEEEE
MKYE
EEEC
>Mature Secondary Structure
MKHKLMTSTIASLMFVAGAAVAADPTPVSVSGGTIHFEGKLVYAACAVSTKSADQTVTLG
CCCCHHHHHHHHHHHHHCCCEECCCCCEEECCCEEEECCEEEEEEEEECCCCCCCEEEEC
QYRTASFTAIGDTTAQVPFSIVLNDCDPKVAATAAVAFSGQADNTNTNLLAVSSADNSTT
CEECEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCE
ATGVGIEILDNTSSPLKPDGATFSAKQALVEGTNTLRFTARYKATAAATPGQANADATFI
EEEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCEEEE
MKYE
EEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2890624 [H]