| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is pheP [H]
Identifier: 29142692
GI number: 29142692
Start: 2363880
End: 2365274
Strand: Reverse
Name: pheP [H]
Synonym: t2293
Alternate gene names: 29142692
Gene position: 2365274-2363880 (Counterclockwise)
Preceding gene: 29142695
Following gene: 29142690
Centisome position: 49.36
GC content: 53.41
Gene sequence:
>1395_bases GTGAAAAACGCGTCAACTGCATCCGGCGCCAGCGTGTCGGATGCCGCGTCGAAGAATGAACCGACGCTTCAACGGGGGTT GCAAAACCGCCATATTCAGCTAATCGCCCTGGGCGGCGCCATTGGCACCGGACTGTTTCTGGGCATCGGCCCGGCGATTC AAATGGCGGGGCCGGCTGTTTTGTTGGGCTATGGCGTTGCCGGGATTATCGCTTTTCTCATTATGCGCCAGTTGGGTGAA ATGGTCGTGGAAGAGCCGGTTTCCGGATCGTTTGCCCACTTCGCCTGGAAATATTGGGGGCCGTTTGCGGGCTTTTTGTC GGGCTGGAACTATTGGGTCATGTTTGTGCTGGTCGGGATGGCGGAGCTGACCGCGGCGGGCATCTATATGCAGTACTGGC TGCCTGACGTACCAACATGGGTATGGGCGGCGGTGTTTTTTATTATCATTAATGCCGTGAATCTGGTGAACGTTCGTCTG TATGGCGAAACGGAATTCTGGTTCGCGCTCATTAAAGTGCTGGCGATTATCGGCATGATAGGTTTTGGTCTGTGGCTGCT GTTCTCCGGCCACGGCGGCGAACATGCCAGCATTGATAACCTCTGGCGTTATAACGGTTTCTTCGCTACCGGTTGGCATG GTTTGCTTCTGTCGCTGGCGGTGATTATGTTTTCTTTTGGCGGACTGGAGCTGATCGGCATTACTGCGGCGGAAGCGCGC GATCCGCAAAAAAGCATCCCGAAAGCGGTGAATCAGGTGGTATACCGTATTTTGCTGTTCTACATCGGTTCGCTGGTGGT GTTGCTGGCGCTCTATCCATGGGTAGAGGTGAAATCCAATAGCAGCCCTTTTGTGATGATCTTCCATAACCTGGACAGTA ATGTGGTGGCTTCGGCGCTGAATTTCGTTATCCTGGTCGCGTCGCTTTCGGTGTATAACAGCGGCGTTTATTCGAATAGC CGAATGCTGTTCGGCCTGTCCGTACAAGGCAACGCGCCGAAATTTTTAACTCGCGTCAGCCATCGCGGCGTGCCGGTGAA CTCGCTGATGCTGTCCGGAGCGATTACCTCGCTGGTGGTGCTGATCAACTATCTGTTGCCGCAAAAAGCGTTTAGCCTGT TGATGGCGCTGGTTGTCGCGACGCTATTGCTAAACTGGATAATGATCTGTCTCGCGCATTTACGTTTTCGCGCGGCGATG CGTCGTAAAGGGCGCGAGACGCAATTTAAGGCGCTGTTCTATCCCGCCGGAAACTATTTGTGCATTGCGTTTCTGGCGCT GATTCTGGTGTTAATGTGTACGATGGACGATATGCGATTGTCGGCGATTTTGCTGCCGGTATGGATTGTATTTCTGTTTA TCGCGTTTACCGTTTTGCGCCGTAAGGCTCATTAA
Upstream 100 bases:
>100_bases TAACGTCCGGAGTTGAGCCTTGACAAACGATTGCGCCTTGCGGCAGCGAGAGCGAAATGTTAAAAGGTGCCCCTCAATAA AAACGATACAGGGGTAGGAC
Downstream 100 bases:
>100_bases CTTTTTTGCCCGATCCCATGCTCATGCGATCGGGCAATCCATTAATGGCGCAATGTCCCTGACAGCGCGCGAATATCGCT GCCGGTCGGCGTCTGATGAA
Product: phenylalanine transporter
Products: Proton [Cytoplasm]; L-phenylalanine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MKNASTASGASVSDAASKNEPTLQRGLQNRHIQLIALGGAIGTGLFLGIGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGE MVVEEPVSGSFAHFAWKYWGPFAGFLSGWNYWVMFVLVGMAELTAAGIYMQYWLPDVPTWVWAAVFFIIINAVNLVNVRL YGETEFWFALIKVLAIIGMIGFGLWLLFSGHGGEHASIDNLWRYNGFFATGWHGLLLSLAVIMFSFGGLELIGITAAEAR DPQKSIPKAVNQVVYRILLFYIGSLVVLLALYPWVEVKSNSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNS RMLFGLSVQGNAPKFLTRVSHRGVPVNSLMLSGAITSLVVLINYLLPQKAFSLLMALVVATLLLNWIMICLAHLRFRAAM RRKGRETQFKALFYPAGNYLCIAFLALILVLMCTMDDMRLSAILLPVWIVFLFIAFTVLRRKAH
Sequences:
>Translated_464_residues MKNASTASGASVSDAASKNEPTLQRGLQNRHIQLIALGGAIGTGLFLGIGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGE MVVEEPVSGSFAHFAWKYWGPFAGFLSGWNYWVMFVLVGMAELTAAGIYMQYWLPDVPTWVWAAVFFIIINAVNLVNVRL YGETEFWFALIKVLAIIGMIGFGLWLLFSGHGGEHASIDNLWRYNGFFATGWHGLLLSLAVIMFSFGGLELIGITAAEAR DPQKSIPKAVNQVVYRILLFYIGSLVVLLALYPWVEVKSNSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNS RMLFGLSVQGNAPKFLTRVSHRGVPVNSLMLSGAITSLVVLINYLLPQKAFSLLMALVVATLLLNWIMICLAHLRFRAAM RRKGRETQFKALFYPAGNYLCIAFLALILVLMCTMDDMRLSAILLPVWIVFLFIAFTVLRRKAH >Mature_464_residues MKNASTASGASVSDAASKNEPTLQRGLQNRHIQLIALGGAIGTGLFLGIGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGE MVVEEPVSGSFAHFAWKYWGPFAGFLSGWNYWVMFVLVGMAELTAAGIYMQYWLPDVPTWVWAAVFFIIINAVNLVNVRL YGETEFWFALIKVLAIIGMIGFGLWLLFSGHGGEHASIDNLWRYNGFFATGWHGLLLSLAVIMFSFGGLELIGITAAEAR DPQKSIPKAVNQVVYRILLFYIGSLVVLLALYPWVEVKSNSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNS RMLFGLSVQGNAPKFLTRVSHRGVPVNSLMLSGAITSLVVLINYLLPQKAFSLLMALVVATLLLNWIMICLAHLRFRAAM RRKGRETQFKALFYPAGNYLCIAFLALILVLMCTMDDMRLSAILLPVWIVFLFIAFTVLRRKAH
Specific function: Permease that is involved in the transport across the cytoplasmic membrane of phenylalanine [H]
COG id: COG1113
COG function: function code E; Gamma-aminobutyrate permease and related permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Amino acid transporter (AAT) (TC 2.A.3.1) family [H]
Homologues:
Organism=Homo sapiens, GI181337167, Length=351, Percent_Identity=25.0712250712251, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI110347453, Length=286, Percent_Identity=26.2237762237762, Blast_Score=70, Evalue=5e-12, Organism=Escherichia coli, GI1786789, Length=462, Percent_Identity=93.0735930735931, Blast_Score=859, Evalue=0.0, Organism=Escherichia coli, GI1786302, Length=448, Percent_Identity=62.2767857142857, Blast_Score=586, Evalue=1e-169, Organism=Escherichia coli, GI48994972, Length=429, Percent_Identity=44.0559440559441, Blast_Score=368, Evalue=1e-103, Organism=Escherichia coli, GI1786602, Length=452, Percent_Identity=44.9115044247788, Blast_Score=348, Evalue=3e-97, Organism=Escherichia coli, GI1790653, Length=456, Percent_Identity=37.0614035087719, Blast_Score=330, Evalue=8e-92, Organism=Escherichia coli, GI87081915, Length=406, Percent_Identity=38.423645320197, Blast_Score=294, Evalue=9e-81, Organism=Escherichia coli, GI1788480, Length=439, Percent_Identity=36.4464692482916, Blast_Score=269, Evalue=4e-73, Organism=Escherichia coli, GI87081708, Length=410, Percent_Identity=36.5853658536585, Blast_Score=266, Evalue=2e-72, Organism=Escherichia coli, GI1789017, Length=431, Percent_Identity=36.4269141531323, Blast_Score=262, Evalue=4e-71, Organism=Escherichia coli, GI87081869, Length=175, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI87082023, Length=366, Percent_Identity=23.224043715847, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17540018, Length=380, Percent_Identity=21.8421052631579, Blast_Score=69, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17531343, Length=377, Percent_Identity=20.9549071618037, Blast_Score=66, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6320772, Length=449, Percent_Identity=35.1893095768374, Blast_Score=255, Evalue=9e-69, Organism=Saccharomyces cerevisiae, GI6324061, Length=443, Percent_Identity=34.7629796839729, Blast_Score=242, Evalue=9e-65, Organism=Saccharomyces cerevisiae, GI6324059, Length=460, Percent_Identity=35, Blast_Score=215, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6324990, Length=446, Percent_Identity=32.7354260089686, Blast_Score=214, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6319824, Length=446, Percent_Identity=31.8385650224215, Blast_Score=213, Evalue=7e-56, Organism=Saccharomyces cerevisiae, GI6322892, Length=415, Percent_Identity=35.1807228915663, Blast_Score=211, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6324924, Length=415, Percent_Identity=33.7349397590361, Blast_Score=210, Evalue=4e-55, Organism=Saccharomyces cerevisiae, GI6321629, Length=425, Percent_Identity=31.5294117647059, Blast_Score=208, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6324553, Length=399, Percent_Identity=33.5839598997494, Blast_Score=205, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6320717, Length=404, Percent_Identity=28.960396039604, Blast_Score=198, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6321053, Length=464, Percent_Identity=31.6810344827586, Blast_Score=193, Evalue=4e-50, Organism=Saccharomyces cerevisiae, GI6320251, Length=480, Percent_Identity=28.3333333333333, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6319543, Length=435, Percent_Identity=31.9540229885057, Blast_Score=187, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6322967, Length=403, Percent_Identity=30.7692307692308, Blast_Score=186, Evalue=6e-48, Organism=Saccharomyces cerevisiae, GI6319542, Length=466, Percent_Identity=26.6094420600858, Blast_Score=175, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6319608, Length=407, Percent_Identity=29.4840294840295, Blast_Score=174, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6324981, Length=400, Percent_Identity=31.5, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6320364, Length=463, Percent_Identity=27.8617710583153, Blast_Score=132, Evalue=1e-31, Organism=Drosophila melanogaster, GI24666159, Length=416, Percent_Identity=22.3557692307692, Blast_Score=82, Evalue=7e-16, Organism=Drosophila melanogaster, GI221512776, Length=416, Percent_Identity=22.3557692307692, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI221331183, Length=381, Percent_Identity=23.6220472440945, Blast_Score=66, Evalue=5e-11, Organism=Drosophila melanogaster, GI17647653, Length=381, Percent_Identity=23.6220472440945, Blast_Score=66, Evalue=5e-11, Organism=Drosophila melanogaster, GI24664379, Length=381, Percent_Identity=23.6220472440945, Blast_Score=66, Evalue=5e-11, Organism=Drosophila melanogaster, GI161077963, Length=404, Percent_Identity=23.5148514851485, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 - InterPro: IPR004840 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 51063; Mature: 51063
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: PS00218 AMINO_ACID_PERMEASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNASTASGASVSDAASKNEPTLQRGLQNRHIQLIALGGAIGTGLFLGIGPAIQMAGPAV CCCCCCCCCCCCCHHCCCCCCHHHHCCCCCCEEEEEECCHHHHHHHHHCCHHHHHCCCHH LLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAWKYWGPFAGFLSGWNYWVMFVLVGM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHCCHHHHHHHHHHHH AELTAAGIYMQYWLPDVPTWVWAAVFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMI HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHH GFGLWLLFSGHGGEHASIDNLWRYNGFFATGWHGLLLSLAVIMFSFGGLELIGITAAEAR HHHHHHHCCCCCCCCCCHHHHHHCCCEEECCHHHHHHHHHHHHHHCCCEEEEEEEHHHCC DPQKSIPKAVNQVVYRILLFYIGSLVVLLALYPWVEVKSNSSPFVMIFHNLDSNVVASAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCHHHHHHHH NFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTRVSHRGVPVNSLMLSGAITSLVV HHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH LINYLLPQKAFSLLMALVVATLLLNWIMICLAHLRFRAAMRRKGRETQFKALFYPAGNYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHH CIAFLALILVLMCTMDDMRLSAILLPVWIVFLFIAFTVLRRKAH HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKNASTASGASVSDAASKNEPTLQRGLQNRHIQLIALGGAIGTGLFLGIGPAIQMAGPAV CCCCCCCCCCCCCHHCCCCCCHHHHCCCCCCEEEEEECCHHHHHHHHHCCHHHHHCCCHH LLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAWKYWGPFAGFLSGWNYWVMFVLVGM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHCCHHHHHHHHHHHH AELTAAGIYMQYWLPDVPTWVWAAVFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMI HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHH GFGLWLLFSGHGGEHASIDNLWRYNGFFATGWHGLLLSLAVIMFSFGGLELIGITAAEAR HHHHHHHCCCCCCCCCCHHHHHHCCCEEECCHHHHHHHHHHHHHHCCCEEEEEEEHHHCC DPQKSIPKAVNQVVYRILLFYIGSLVVLLALYPWVEVKSNSSPFVMIFHNLDSNVVASAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCHHHHHHHH NFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTRVSHRGVPVNSLMLSGAITSLVV HHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH LINYLLPQKAFSLLMALVVATLLLNWIMICLAHLRFRAAMRRKGRETQFKALFYPAGNYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHH CIAFLALILVLMCTMDDMRLSAILLPVWIVFLFIAFTVLRRKAH HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-phenylalanine [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-phenylalanine [Periplasm] = Proton [Cytoplasm] + L-phenylalanine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1711024; 8905232; 9278503; 8626334 [H]