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The map label for this gene is ykgB [H]

Identifier: 29142695

GI number: 29142695

Start: 2366854

End: 2367414

Strand: Reverse

Name: ykgB [H]

Synonym: t2296

Alternate gene names: 29142695

Gene position: 2367414-2366854 (Counterclockwise)

Preceding gene: 29142696

Following gene: 29142692

Centisome position: 49.4

GC content: 51.52

Gene sequence:

>561_bases
ATGGATAAATATCTTCGTCTGTTAAGTCAGGGGGATCGGCTGGGATTAACATTAATTCGCCTGAGTATCGCCATCGTTTT
TATCTGGATTGGACTACTAAAATTTGTGCCCTATGAGGCAGACAGTATTACCCCGTTTGTGGCGAACAGCCCGTTTATGT
CTTTTTTCTATGAACATCCTGAAGAATATCGTCAGCATCTGACTCATGAGGGCGAACTAAAACCGGAGGAACGCGCCTGG
CAAACGGCCAATAATACGTATGCGTTTTCGGATGGTCTGGGCGTGGTGGAATTGATTATCGCGGCGCTGGTACTGGCTAA
CCCTGTTAGCCGCTGGTTAGGGCTGGCGGGCGGCGTGCTGGCATTCCTGACGCCATTTGTCACGCTGTCGTTTTTAATCA
CCACGCCGGAGGCCTGGGTTATGCCGCTGGGCGATGCGCATTATGGTTTCCCGTATTTATCGGGCGCCGGGCGGCTGGTA
TTAAAAGATACGTTAATGCTGGCAGGTGCGGTGATGATCATGGCGGACTCCGCCCGTTCGTTACTTTTACAGCGCCAGTA
G

Upstream 100 bases:

>100_bases
GGCGCAAAGTAAACAGGCGTCGTCATGGAAAATTACGTCAATGCGTATTGATAATACGGGTTACGCCACTGCGATATTAT
ATAAATAAGGAGAGCCTGAG

Downstream 100 bases:

>100_bases
CGACCCTCTTACTCTCTTTATGCCGCGATTCGTCGGGTGGCGCTTGCGCCATCCGACAATGTGTTGATGAATGATGGACT
ACCCTGCCAGAAGTTCCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MDKYLRLLSQGDRLGLTLIRLSIAIVFIWIGLLKFVPYEADSITPFVANSPFMSFFYEHPEEYRQHLTHEGELKPEERAW
QTANNTYAFSDGLGVVELIIAALVLANPVSRWLGLAGGVLAFLTPFVTLSFLITTPEAWVMPLGDAHYGFPYLSGAGRLV
LKDTLMLAGAVMIMADSARSLLLQRQ

Sequences:

>Translated_186_residues
MDKYLRLLSQGDRLGLTLIRLSIAIVFIWIGLLKFVPYEADSITPFVANSPFMSFFYEHPEEYRQHLTHEGELKPEERAW
QTANNTYAFSDGLGVVELIIAALVLANPVSRWLGLAGGVLAFLTPFVTLSFLITTPEAWVMPLGDAHYGFPYLSGAGRLV
LKDTLMLAGAVMIMADSARSLLLQRQ
>Mature_186_residues
MDKYLRLLSQGDRLGLTLIRLSIAIVFIWIGLLKFVPYEADSITPFVANSPFMSFFYEHPEEYRQHLTHEGELKPEERAW
QTANNTYAFSDGLGVVELIIAALVLANPVSRWLGLAGGVLAFLTPFVTLSFLITTPEAWVMPLGDAHYGFPYLSGAGRLV
LKDTLMLAGAVMIMADSARSLLLQRQ

Specific function: Unknown

COG id: COG3059

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081715, Length=186, Percent_Identity=84.4086021505376, Blast_Score=327, Evalue=4e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007339 [H]

Pfam domain/function: PF04224 DUF417 [H]

EC number: NA

Molecular weight: Translated: 20706; Mature: 20706

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKYLRLLSQGDRLGLTLIRLSIAIVFIWIGLLKFVPYEADSITPFVANSPFMSFFYEHP
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCH
EEYRQHLTHEGELKPEERAWQTANNTYAFSDGLGVVELIIAALVLANPVSRWLGLAGGVL
HHHHHHCCCCCCCCCHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH
AFLTPFVTLSFLITTPEAWVMPLGDAHYGFPYLSGAGRLVLKDTLMLAGAVMIMADSARS
HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHH
LLLQRQ
HHHCCC
>Mature Secondary Structure
MDKYLRLLSQGDRLGLTLIRLSIAIVFIWIGLLKFVPYEADSITPFVANSPFMSFFYEHP
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCH
EEYRQHLTHEGELKPEERAWQTANNTYAFSDGLGVVELIIAALVLANPVSRWLGLAGGVL
HHHHHHCCCCCCCCCHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH
AFLTPFVTLSFLITTPEAWVMPLGDAHYGFPYLSGAGRLVLKDTLMLAGAVMIMADSARS
HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHH
LLLQRQ
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]