| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is apeE [H]
Identifier: 29142690
GI number: 29142690
Start: 2360310
End: 2362280
Strand: Reverse
Name: apeE [H]
Synonym: t2291
Alternate gene names: 29142690
Gene position: 2362280-2360310 (Counterclockwise)
Preceding gene: 29142692
Following gene: 29142686
Centisome position: 49.3
GC content: 55.81
Gene sequence:
>1971_bases ATGACCCAAAAGCGTACCCTGCTAAAATACGGCATACTCTCGCTGGCGCTGGCCGCGCCATTATCTGCCTGTGCGTTTGA CTCTCTTACGGTGATTGGCGATAGCCTTAGCGATACCGGAAATAACGGTCGCTGGACCTGGGATAGTGGTCAAAATAAGC TCTACGACGAACAGTTGGCCGAACGATATGGGCTGGCATTAAGCCCTTCCAGCAATGGCGGTTCTAATTATGCCGCTGGC GGCGCGATGACGGCCCCGGAATTAAACCCGCAGGATAATACCGCGGATCAGGTACGGCAGTGGCTTGCCAATACGGGGGG AAAAGCCGACCACAACGGTTTGTATATTCACTGGGTCGGCGGAAACGATCTGGCGGCGGCCATCGCGCGACCTGCCATGG CACAGCAAATAGCCGGTAATAGCGCCACTAGCGCGGCGGCGCAGGTAGGGCTGTTACTGGATGCCGGCGCCGGGCTGGTC GTGGTGCCAAACGTACCGGATATTAGTGCGACGCCAGAGCTTCTGGAGGCGGTAATCACCGCCGGGCTGGGCGCAGCGGC GCCCCCGGCGCTAAAAGCGGCGTTAGAGGCGCTGGCGGAGGGAGCTACGCCCGATTTCGCCAGTCGGCAACAGGCGATCC GCAAGGCGTTGCTGGCGGCGGCTGCAACGGTAAGCAGCAATCCGTTTATTCAGCAACTGCTCGTTGAGCAACTGCTGGCG GGCTATGAAAAGGTGGCAGAGCAGGCGTCAGCTCTGACCGATTATTATAATCAGATGGAAGAGAAGGGGCTGGAGCAACA CGGCGGCAATATAGCCCGTGCCGATATCAACGGCCTCTTTAAGGAAATTCTTGCCAACCCGCAGGCGTTTGGTCTGACAA ATACCGTAGGCATGGCCTGCCCGCCGGGCGTATCCGCTTCGGTGTGCTCCTCGGCAATGCCTGGATTTAATGCGTCGCAG GACTATCTGTTTGCCGATCATTTACATCCCGGTCCGCAGGTCCATACCATTATTGCGCAATATATTCAGTCGATCATTGC CGCGCCGGTACAGGCGACATATCTGAACCAAAGCGTTCAGTCGATGGCGCAAGGCAGTCGTACCACGCTTGACAGCCGTT ATCAGCAGCTTCGCCAGGGGGAAAATCCTGTTGGTTCACTGGGCATGTTCGGCGGATACAGCGGGGGATATCAACGTTAT GATAATAATGAGGCCGACGGGAACGGTAATCATAATAATCTGACGGTTGGCGTCGATTATCAGCTTAACGAGCAGGTACT GCTGGGAGGGCTGATAGCCGGTTCTCTGGATAAGCAACATCCTGACGATAATTATCGTTATGACGCCCGCGGTTTTCAGG CCGCCGTATTCAGCCATTTACGCGCCGGTCAGGCGTGGCTGGATGGCGATTTACACTACCTGTCCGCTAAATTCAGTAAC ATTCAGCGCAGTATCACGCTCGGTGCGCTAAGACGGGTGGAAGAGGGCGAAACCAACGGTCGGCTGTGGGGCGCGAGGTT AACCAGCGGTTATGATTTTGTCATGATGCCGTGGTTAACGACCGGGCCGATGCTGCAATATGCATGGGATTACAGCCACG TTAATGGTTATAGCGAGAAGCTCAATACCAGTACATCAATGCGTTTTGGCGACCAAAACGCCCATTCGCAGATGGGCAGC GTGGGTTGGCGTCTGGATCTTCGCCACAGTATCATTCATTCCTGGGCGCAGATTAATTATCGCCGTCAGTTTGGCGATGA TACGTATGTGGCGAACGGCGGCCTTAAATCGACCGCGCTGACGTTTAGCCGTGCCGGGAAAGCGCAGGATAAAAACTGGG TTGATATCGCGATTGGCGCAGATTTTCCGCTGTCGGCAACAGTGTCCGCTTTCGCCGGGCTGGCGCAAACGGCAGGGTTA AGCGATGGCAATCAAACCCGTTATAACGTTGGGTTTAGCGCCCGATTTTGA
Upstream 100 bases:
>100_bases GAAAACTTTTTAACCAGAATGTTTAAAACGATTGCAATATCTCTGTCGGATAATGATTAGAACCGTCGTACCTATCAACA ATAACATTAAGGAACATCGG
Downstream 100 bases:
>100_bases TGACACGCCAGGGAGGGCCAACCCCGTGGTGACACAATATCGCCATCGTAGGCGCAAACCGGTGTCACGCCGTGTTCGTC GCCAATCAGCAGCGATAGAC
Product: outer membrane esterase
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 656; Mature: 655
Protein sequence:
>656_residues MTQKRTLLKYGILSLALAAPLSACAFDSLTVIGDSLSDTGNNGRWTWDSGQNKLYDEQLAERYGLALSPSSNGGSNYAAG GAMTAPELNPQDNTADQVRQWLANTGGKADHNGLYIHWVGGNDLAAAIARPAMAQQIAGNSATSAAAQVGLLLDAGAGLV VVPNVPDISATPELLEAVITAGLGAAAPPALKAALEALAEGATPDFASRQQAIRKALLAAAATVSSNPFIQQLLVEQLLA GYEKVAEQASALTDYYNQMEEKGLEQHGGNIARADINGLFKEILANPQAFGLTNTVGMACPPGVSASVCSSAMPGFNASQ DYLFADHLHPGPQVHTIIAQYIQSIIAAPVQATYLNQSVQSMAQGSRTTLDSRYQQLRQGENPVGSLGMFGGYSGGYQRY DNNEADGNGNHNNLTVGVDYQLNEQVLLGGLIAGSLDKQHPDDNYRYDARGFQAAVFSHLRAGQAWLDGDLHYLSAKFSN IQRSITLGALRRVEEGETNGRLWGARLTSGYDFVMMPWLTTGPMLQYAWDYSHVNGYSEKLNTSTSMRFGDQNAHSQMGS VGWRLDLRHSIIHSWAQINYRRQFGDDTYVANGGLKSTALTFSRAGKAQDKNWVDIAIGADFPLSATVSAFAGLAQTAGL SDGNQTRYNVGFSARF
Sequences:
>Translated_656_residues MTQKRTLLKYGILSLALAAPLSACAFDSLTVIGDSLSDTGNNGRWTWDSGQNKLYDEQLAERYGLALSPSSNGGSNYAAG GAMTAPELNPQDNTADQVRQWLANTGGKADHNGLYIHWVGGNDLAAAIARPAMAQQIAGNSATSAAAQVGLLLDAGAGLV VVPNVPDISATPELLEAVITAGLGAAAPPALKAALEALAEGATPDFASRQQAIRKALLAAAATVSSNPFIQQLLVEQLLA GYEKVAEQASALTDYYNQMEEKGLEQHGGNIARADINGLFKEILANPQAFGLTNTVGMACPPGVSASVCSSAMPGFNASQ DYLFADHLHPGPQVHTIIAQYIQSIIAAPVQATYLNQSVQSMAQGSRTTLDSRYQQLRQGENPVGSLGMFGGYSGGYQRY DNNEADGNGNHNNLTVGVDYQLNEQVLLGGLIAGSLDKQHPDDNYRYDARGFQAAVFSHLRAGQAWLDGDLHYLSAKFSN IQRSITLGALRRVEEGETNGRLWGARLTSGYDFVMMPWLTTGPMLQYAWDYSHVNGYSEKLNTSTSMRFGDQNAHSQMGS VGWRLDLRHSIIHSWAQINYRRQFGDDTYVANGGLKSTALTFSRAGKAQDKNWVDIAIGADFPLSATVSAFAGLAQTAGL SDGNQTRYNVGFSARF >Mature_655_residues TQKRTLLKYGILSLALAAPLSACAFDSLTVIGDSLSDTGNNGRWTWDSGQNKLYDEQLAERYGLALSPSSNGGSNYAAGG AMTAPELNPQDNTADQVRQWLANTGGKADHNGLYIHWVGGNDLAAAIARPAMAQQIAGNSATSAAAQVGLLLDAGAGLVV VPNVPDISATPELLEAVITAGLGAAAPPALKAALEALAEGATPDFASRQQAIRKALLAAAATVSSNPFIQQLLVEQLLAG YEKVAEQASALTDYYNQMEEKGLEQHGGNIARADINGLFKEILANPQAFGLTNTVGMACPPGVSASVCSSAMPGFNASQD YLFADHLHPGPQVHTIIAQYIQSIIAAPVQATYLNQSVQSMAQGSRTTLDSRYQQLRQGENPVGSLGMFGGYSGGYQRYD NNEADGNGNHNNLTVGVDYQLNEQVLLGGLIAGSLDKQHPDDNYRYDARGFQAAVFSHLRAGQAWLDGDLHYLSAKFSNI QRSITLGALRRVEEGETNGRLWGARLTSGYDFVMMPWLTTGPMLQYAWDYSHVNGYSEKLNTSTSMRFGDQNAHSQMGSV GWRLDLRHSIIHSWAQINYRRQFGDDTYVANGGLKSTALTFSRAGKAQDKNWVDIAIGADFPLSATVSAFAGLAQTAGLS DGNQTRYNVGFSARF
Specific function: Unknown
COG id: COG3240
COG function: function code IR; Phospholipase/lecithinase/hemolysin
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]
Homologues:
Organism=Escherichia coli, GI87082287, Length=152, Percent_Identity=30.9210526315789, Blast_Score=87, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005546 - InterPro: IPR013830 - InterPro: IPR017186 - InterPro: IPR001087 - InterPro: IPR008265 - InterPro: IPR006315 [H]
Pfam domain/function: PF03797 Autotransporter; PF00657 Lipase_GDSL [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 70004; Mature: 69872
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQKRTLLKYGILSLALAAPLSACAFDSLTVIGDSLSDTGNNGRWTWDSGQNKLYDEQLA CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCEECCCCCCCHHHHHHH ERYGLALSPSSNGGSNYAAGGAMTAPELNPQDNTADQVRQWLANTGGKADHNGLYIHWVG HHHCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEC GNDLAAAIARPAMAQQIAGNSATSAAAQVGLLLDAGAGLVVVPNVPDISATPELLEAVIT CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEECCCCEEEECCCCCCCCCHHHHHHHHH AGLGAAAPPALKAALEALAEGATPDFASRQQAIRKALLAAAATVSSNPFIQQLLVEQLLA HCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH GYEKVAEQASALTDYYNQMEEKGLEQHGGNIARADINGLFKEILANPQAFGLTNTVGMAC HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCC PPGVSASVCSSAMPGFNASQDYLFADHLHPGPQVHTIIAQYIQSIIAAPVQATYLNQSVQ CCCCCHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH SMAQGSRTTLDSRYQQLRQGENPVGSLGMFGGYSGGYQRYDNNEADGNGNHNNLTVGVDY HHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC QLNEQVLLGGLIAGSLDKQHPDDNYRYDARGFQAAVFSHLRAGQAWLDGDLHYLSAKFSN EECCHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHH IQRSITLGALRRVEEGETNGRLWGARLTSGYDFVMMPWLTTGPMLQYAWDYSHVNGYSEK HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECCCCCCCCHHEEECHHHCCCHHHH LNTSTSMRFGDQNAHSQMGSVGWRLDLRHSIIHSWAQINYRRQFGDDTYVANGGLKSTAL HCCCCCEECCCCHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHH TFSRAGKAQDKNWVDIAIGADFPLSATVSAFAGLAQTAGLSDGNQTRYNVGFSARF HHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCEECCC >Mature Secondary Structure TQKRTLLKYGILSLALAAPLSACAFDSLTVIGDSLSDTGNNGRWTWDSGQNKLYDEQLA CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCEECCCCCCCHHHHHHH ERYGLALSPSSNGGSNYAAGGAMTAPELNPQDNTADQVRQWLANTGGKADHNGLYIHWVG HHHCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEC GNDLAAAIARPAMAQQIAGNSATSAAAQVGLLLDAGAGLVVVPNVPDISATPELLEAVIT CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEECCCCEEEECCCCCCCCCHHHHHHHHH AGLGAAAPPALKAALEALAEGATPDFASRQQAIRKALLAAAATVSSNPFIQQLLVEQLLA HCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH GYEKVAEQASALTDYYNQMEEKGLEQHGGNIARADINGLFKEILANPQAFGLTNTVGMAC HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCC PPGVSASVCSSAMPGFNASQDYLFADHLHPGPQVHTIIAQYIQSIIAAPVQATYLNQSVQ CCCCCHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH SMAQGSRTTLDSRYQQLRQGENPVGSLGMFGGYSGGYQRYDNNEADGNGNHNNLTVGVDY HHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC QLNEQVLLGGLIAGSLDKQHPDDNYRYDARGFQAAVFSHLRAGQAWLDGDLHYLSAKFSN EECCHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHH IQRSITLGALRRVEEGETNGRLWGARLTSGYDFVMMPWLTTGPMLQYAWDYSHVNGYSEK HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECCCCCCCCHHEEECHHHCCCHHHH LNTSTSMRFGDQNAHSQMGSVGWRLDLRHSIIHSWAQINYRRQFGDDTYVANGGLKSTAL HCCCCCEECCCCHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHH TFSRAGKAQDKNWVDIAIGADFPLSATVSAFAGLAQTAGLSDGNQTRYNVGFSARF HHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8449874 [H]