| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is leuS [H]
Identifier: 29142620
GI number: 29142620
Start: 2284615
End: 2287197
Strand: Direct
Name: leuS [H]
Synonym: t2219
Alternate gene names: 29142620
Gene position: 2284615-2287197 (Clockwise)
Preceding gene: 29142614
Following gene: 29142621
Centisome position: 47.68
GC content: 55.83
Gene sequence:
>2583_bases ATGCAAGAGCAATACCGCCCGGAAGAGATAGAATCCAAAGTACAGCTTCACTGGGATGAGAAGCGCACATTTGAAGTGAC CGAAGACGAGAGCAAAGAGAAGTATTACTGCCTGTCGATGCTTCCCTATCCTTCTGGCCGACTACACATGGGCCACGTAC GTAACTACACCATCGGCGACGTGGTTGCCCGCTACCAGCATATGCTGGGCAAAAACGTGCTGCAGCCAATCGGCTGGGAC GCCTTCGGCCTGCCGGCGGAAGGCGCGGCGGTGAAGAACAACACCGCGCCGGCGCCGTGGACGTACGACAACATCGCGTA CATGAAAAACCAGCTCAAAACGCTGGGTTTTGGCTATGACTGGAGCCGTGAAATCGCGACCTGCACCCCGGAATACTACC GTTGGGAACAGAAATTCTTCACCGAGCTGTATAAAAAAGGCCTGGTGTACAAGAAGACTTCTGCCGTTAACTGGTGCCCG AACGATCAGACCGTTCTCGCCAACGAACAGGTGATCGACGGCTGCTGCTGGCGTTGCGACACCAAAGTTGAGCGTAAAGA GATCCCACAGTGGTTTATCAAAATCACCGCTTACGCAGACGAGCTGTTGCGCGATCTGGATAAGCTGGACCACTGGCCTG ATACCGTAAAAACGATGCAGCGCAACTGGATTGGCCGCTCTGAAGGCGTGGAAATCACCTTCGATGTGAAGGGTTACGAT AACACGCTGACCGTCTATACCACCCGTCCGGATACCTTTATGGGCGCCACCTACCTGGCAGTGGCCGCCGGTCATCCGCT GGCGCAAAAAGCGGCGGCGAACAACGCCGAGCTGGCGGCGTTCATCGACGAATGCCGTAACACCAAAGTGGCCGAAGCCG AAATGGCGACCATGGAGAAAAAAGGCGTCGACACCGGCTATAAAGCGATTCATCCGTTAACTGGCGAAGAGATCCCGGTC TGGGCGGCAAACTTTGTCCTGATGGAGTACGGCACTGGCGCGGTGATGGCCGTTCCGGGTCACGATCAGCGCGACTACGA ATTTGCCTCCAAATACGGTTTGACCATCAAGCCGGTGATTCTGGCCGCTGACGGTTCCGAGCCGGATCTTTCCGAACAGG CGCTGACCGAAAAAGGCGTGCTGTTTAACTCCGGTGAGTTCGACGGTCTGGCCTTTGAAGCGGCGTTTAACGCCATTGCC GATAAACTGGCGGAAAAAGGCGTCGGCGAACGTAAAGTGAACTACCGTCTGCGTGACTGGGGCGTTTCCCGTCAGCGTTA CTGGGGCGCGCCGATCCCGATGGTCACCCTGGAAGACGGCACCGTGCTGCCGACGCCGGAAGATCAACTGCCGGTTATTT TGCCGGAAGACGTCGTCATGGACGGCATCACCAGCCCGATCAAGGCCGATCCTGAGTGGGCGAAAACCACCGTTAACGGT ATGCCGGCGCTGCGTGAAACCGACACCTTCGACACCTTTATGGAATCGTCATGGTACTACGCGCGTTACACCTGCCCGCA GTATCAGGAAGGAATGCTGGATTCGAAAGCGGCAAACTACTGGCTGCCAGTCGACATCTACATCGGCGGTATTGAACATG CCATCATGCACCTGCTCTACTTCCGCTTCTTCCATAAGCTGATGCGCGATGCGGGCATGGTCACCTCTGACGAGCCGGCT AAACAGTTGCTGTGCCAGGGCATGGTACTGGCGGATGCGTTCTATTATGTCGGCGAGAACGGCGAGCGTAACTGGGTTTC GCCAGTTGACGCTATCGTCGAGCGCGATGAAAAAGGCCGCATCGTCAAAGCAAAAGACGCAGCGGGTCATGAGCTGGTCT ACACTGGCATGAGTAAAATGTCCAAGTCGAAAAATAACGGTATCGACCCGCAGGTAATGGTTGAACGTTATGGCGCGGAT ACGGTACGCCTGTTTATGATGTTCGCTTCTCCGGCGGATATGACTCTGGAATGGCAGGAGTCCGGCGTAGAAGGCGCAAA CCGCTTTATTAAACGCGTCTGGAAGCTGGTTTACGAACACACCGCTAAAGGTCCTGTCGCGGCGCTGAACGTCGATGCGC TGAGCGAAGATCAAAAAGCGCTGCGTCGCGATGTGCATAAAACCATTGCCAAAGTGACCGATGATATCGGCCGCCGTCAG ACGTTCAACACCGCCATTGCGGCGATCATGGAGTTGATGAACAAACTGGCGAAAGCCCCGCAGGAAGGCGAACAAGACCG CGCACTGCTTCAGGAAGCGCTGCAGGCCGTCGTGCGTATGCTTAACCCGTTCACCCCGCACGTCTGCTTTACCTTGTGGC AGGAACTGGGTGGCGAAGGCGATATCGACAACGCGCCGTGGCCGGTTGCCGACGAGCAGGCAATGGTGGAAAACACCACG CTGGTTGTCGTGCAGGTTAACGGTAAAGTTCGCGGTAAGATCACCGTTGCGGTGGATGCCACCGAAGAACAGGTGCGTGA ACGTGCAGGCCAGGAACATCTGGTGGCAAAATATCTTGATGGCGTTACCGTGCGTAAAGTGATTTACGTTCCGGGTAAAC TCCTCAATCTGGTTGTTGGCTAA
Upstream 100 bases:
>100_bases CCCTGTTTTGACGTGCGTGTTTGGGCTATGCTATGCGGATCTAAACACCACCTCTAAAGCTACATTTGTAGCTGTATCGA AAACAGGACTACTGGCTGCC
Downstream 100 bases:
>100_bases GCGCGGGAGGAAGCGTGCGATATCTGGTAACACTGTTGTTATCTCTGGCGGTGCTGGTCACCGCCGGATGCGGCTGGCAT CTGCGTAGCACTACGCAGGT
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 860; Mature: 860
Protein sequence:
>860_residues MQEQYRPEEIESKVQLHWDEKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQHMLGKNVLQPIGWD AFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLVYKKTSAVNWCP NDQTVLANEQVIDGCCWRCDTKVERKEIPQWFIKITAYADELLRDLDKLDHWPDTVKTMQRNWIGRSEGVEITFDVKGYD NTLTVYTTRPDTFMGATYLAVAAGHPLAQKAAANNAELAAFIDECRNTKVAEAEMATMEKKGVDTGYKAIHPLTGEEIPV WAANFVLMEYGTGAVMAVPGHDQRDYEFASKYGLTIKPVILAADGSEPDLSEQALTEKGVLFNSGEFDGLAFEAAFNAIA DKLAEKGVGERKVNYRLRDWGVSRQRYWGAPIPMVTLEDGTVLPTPEDQLPVILPEDVVMDGITSPIKADPEWAKTTVNG MPALRETDTFDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVTSDEPA KQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSKSKNNGIDPQVMVERYGAD TVRLFMMFASPADMTLEWQESGVEGANRFIKRVWKLVYEHTAKGPVAALNVDALSEDQKALRRDVHKTIAKVTDDIGRRQ TFNTAIAAIMELMNKLAKAPQEGEQDRALLQEALQAVVRMLNPFTPHVCFTLWQELGGEGDIDNAPWPVADEQAMVENTT LVVVQVNGKVRGKITVAVDATEEQVRERAGQEHLVAKYLDGVTVRKVIYVPGKLLNLVVG
Sequences:
>Translated_860_residues MQEQYRPEEIESKVQLHWDEKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQHMLGKNVLQPIGWD AFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLVYKKTSAVNWCP NDQTVLANEQVIDGCCWRCDTKVERKEIPQWFIKITAYADELLRDLDKLDHWPDTVKTMQRNWIGRSEGVEITFDVKGYD NTLTVYTTRPDTFMGATYLAVAAGHPLAQKAAANNAELAAFIDECRNTKVAEAEMATMEKKGVDTGYKAIHPLTGEEIPV WAANFVLMEYGTGAVMAVPGHDQRDYEFASKYGLTIKPVILAADGSEPDLSEQALTEKGVLFNSGEFDGLAFEAAFNAIA DKLAEKGVGERKVNYRLRDWGVSRQRYWGAPIPMVTLEDGTVLPTPEDQLPVILPEDVVMDGITSPIKADPEWAKTTVNG MPALRETDTFDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVTSDEPA KQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSKSKNNGIDPQVMVERYGAD TVRLFMMFASPADMTLEWQESGVEGANRFIKRVWKLVYEHTAKGPVAALNVDALSEDQKALRRDVHKTIAKVTDDIGRRQ TFNTAIAAIMELMNKLAKAPQEGEQDRALLQEALQAVVRMLNPFTPHVCFTLWQELGGEGDIDNAPWPVADEQAMVENTT LVVVQVNGKVRGKITVAVDATEEQVRERAGQEHLVAKYLDGVTVRKVIYVPGKLLNLVVG >Mature_860_residues MQEQYRPEEIESKVQLHWDEKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQHMLGKNVLQPIGWD AFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLVYKKTSAVNWCP NDQTVLANEQVIDGCCWRCDTKVERKEIPQWFIKITAYADELLRDLDKLDHWPDTVKTMQRNWIGRSEGVEITFDVKGYD NTLTVYTTRPDTFMGATYLAVAAGHPLAQKAAANNAELAAFIDECRNTKVAEAEMATMEKKGVDTGYKAIHPLTGEEIPV WAANFVLMEYGTGAVMAVPGHDQRDYEFASKYGLTIKPVILAADGSEPDLSEQALTEKGVLFNSGEFDGLAFEAAFNAIA DKLAEKGVGERKVNYRLRDWGVSRQRYWGAPIPMVTLEDGTVLPTPEDQLPVILPEDVVMDGITSPIKADPEWAKTTVNG MPALRETDTFDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVTSDEPA KQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSKSKNNGIDPQVMVERYGAD TVRLFMMFASPADMTLEWQESGVEGANRFIKRVWKLVYEHTAKGPVAALNVDALSEDQKALRRDVHKTIAKVTDDIGRRQ TFNTAIAAIMELMNKLAKAPQEGEQDRALLQEALQAVVRMLNPFTPHVCFTLWQELGGEGDIDNAPWPVADEQAMVENTT LVVVQVNGKVRGKITVAVDATEEQVRERAGQEHLVAKYLDGVTVRKVIYVPGKLLNLVVG
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=863, Percent_Identity=36.7323290845886, Blast_Score=514, Evalue=1e-145, Organism=Escherichia coli, GI1786861, Length=860, Percent_Identity=95.2325581395349, Blast_Score=1717, Evalue=0.0, Organism=Escherichia coli, GI1790708, Length=393, Percent_Identity=26.2086513994911, Blast_Score=113, Evalue=5e-26, Organism=Caenorhabditis elegans, GI71997510, Length=881, Percent_Identity=29.6254256526674, Blast_Score=350, Evalue=1e-96, Organism=Caenorhabditis elegans, GI71997517, Length=873, Percent_Identity=29.6678121420389, Blast_Score=350, Evalue=2e-96, Organism=Caenorhabditis elegans, GI212645227, Length=437, Percent_Identity=26.3157894736842, Blast_Score=133, Evalue=5e-31, Organism=Caenorhabditis elegans, GI71980946, Length=151, Percent_Identity=29.1390728476821, Blast_Score=67, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6323414, Length=809, Percent_Identity=36.9592088998764, Blast_Score=504, Evalue=1e-143, Organism=Saccharomyces cerevisiae, GI6321531, Length=387, Percent_Identity=26.6149870801034, Blast_Score=100, Evalue=8e-22, Organism=Saccharomyces cerevisiae, GI6325217, Length=357, Percent_Identity=23.5294117647059, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI21355409, Length=882, Percent_Identity=32.8798185941043, Blast_Score=440, Evalue=1e-123, Organism=Drosophila melanogaster, GI281366294, Length=143, Percent_Identity=31.4685314685315, Blast_Score=74, Evalue=4e-13,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 96941; Mature: 96941
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEQYRPEEIESKVQLHWDEKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGD CCCCCCCHHHHCCEEEEECCCCEEEECCCCCCCCEEEEEECCCCCCCEEECCCCCCCHHH VVARYQHMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKTLGFGYD HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCC WSREIATCTPEYYRWEQKFFTELYKKGLVYKKTSAVNWCPNDQTVLANEQVIDGCCWRCD CCCCHHHCCHHHHHHHHHHHHHHHHCCCEEEECCCCEECCCCCEEEECHHHHHHHHHCCC TKVERKEIPQWFIKITAYADELLRDLDKLDHWPDTVKTMQRNWIGRSEGVEITFDVKGYD CCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEECCCC NTLTVYTTRPDTFMGATYLAVAAGHPLAQKAAANNAELAAFIDECRNTKVAEAEMATMEK CEEEEEEECCCCHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHH KGVDTGYKAIHPLTGEEIPVWAANFVLMEYGTGAVMAVPGHDQRDYEFASKYGLTIKPVI CCCCCCHHHCCCCCCCCCCEEEEEEEEEEECCCEEEEECCCCCCCHHHHHHCCCEEEEEE LAADGSEPDLSEQALTEKGVLFNSGEFDGLAFEAAFNAIADKLAEKGVGERKVNYRLRDW EEECCCCCCCHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEHHC GVSRQRYWGAPIPMVTLEDGTVLPTPEDQLPVILPEDVVMDGITSPIKADPEWAKTTVNG CCCCHHCCCCCCCEEEECCCEECCCCCCCCCEECCHHHHHHCCCCCCCCCCHHHHHHHCC MPALRETDTFDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLY CCCCCCCCHHHHHHHCCCEEEEECCCHHHHCCCCCCCCCEEEEEEEEECCHHHHHHHHHH FRFFHKLMRDAGMVTSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGR HHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHEECCCCCCCCCCHHHHHHCCCCCCC IVKAKDAAGHELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQE EEEECCCCCCEEEEHHHHHHHHCCCCCCCHHHHHHHCCCHHEEEEHHHCCCCCCEEEEHH SGVEGANRFIKRVWKLVYEHTAKGPVAALNVDALSEDQKALRRDVHKTIAKVTDDIGRRQ CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH TFNTAIAAIMELMNKLAKAPQEGEQDRALLQEALQAVVRMLNPFTPHVCFTLWQELGGEG HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC DIDNAPWPVADEQAMVENTTLVVVQVNGKVRGKITVAVDATEEQVRERAGQEHLVAKYLD CCCCCCCCCCCCCCEECCCEEEEEEECCEEEEEEEEEEECCHHHHHHHCCHHHHHHHHHC GVTVRKVIYVPGKLLNLVVG CCEEEEEEECCHHHHHHHCC >Mature Secondary Structure MQEQYRPEEIESKVQLHWDEKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGD CCCCCCCHHHHCCEEEEECCCCEEEECCCCCCCCEEEEEECCCCCCCEEECCCCCCCHHH VVARYQHMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKTLGFGYD HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCC WSREIATCTPEYYRWEQKFFTELYKKGLVYKKTSAVNWCPNDQTVLANEQVIDGCCWRCD CCCCHHHCCHHHHHHHHHHHHHHHHCCCEEEECCCCEECCCCCEEEECHHHHHHHHHCCC TKVERKEIPQWFIKITAYADELLRDLDKLDHWPDTVKTMQRNWIGRSEGVEITFDVKGYD CCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEECCCC NTLTVYTTRPDTFMGATYLAVAAGHPLAQKAAANNAELAAFIDECRNTKVAEAEMATMEK CEEEEEEECCCCHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHH KGVDTGYKAIHPLTGEEIPVWAANFVLMEYGTGAVMAVPGHDQRDYEFASKYGLTIKPVI CCCCCCHHHCCCCCCCCCCEEEEEEEEEEECCCEEEEECCCCCCCHHHHHHCCCEEEEEE LAADGSEPDLSEQALTEKGVLFNSGEFDGLAFEAAFNAIADKLAEKGVGERKVNYRLRDW EEECCCCCCCHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEHHC GVSRQRYWGAPIPMVTLEDGTVLPTPEDQLPVILPEDVVMDGITSPIKADPEWAKTTVNG CCCCHHCCCCCCCEEEECCCEECCCCCCCCCEECCHHHHHHCCCCCCCCCCHHHHHHHCC MPALRETDTFDTFMESSWYYARYTCPQYQEGMLDSKAANYWLPVDIYIGGIEHAIMHLLY CCCCCCCCHHHHHHHCCCEEEEECCCHHHHCCCCCCCCCEEEEEEEEECCHHHHHHHHHH FRFFHKLMRDAGMVTSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGR HHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHEECCCCCCCCCCHHHHHHCCCCCCC IVKAKDAAGHELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQE EEEECCCCCCEEEEHHHHHHHHCCCCCCCHHHHHHHCCCHHEEEEHHHCCCCCCEEEEHH SGVEGANRFIKRVWKLVYEHTAKGPVAALNVDALSEDQKALRRDVHKTIAKVTDDIGRRQ CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH TFNTAIAAIMELMNKLAKAPQEGEQDRALLQEALQAVVRMLNPFTPHVCFTLWQELGGEG HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC DIDNAPWPVADEQAMVENTTLVVVQVNGKVRGKITVAVDATEEQVRERAGQEHLVAKYLD CCCCCCCCCCCCCCEECCCEEEEEEECCEEEEEEEEEEECCHHHHHHHCCHHHHHHHHHC GVTVRKVIYVPGKLLNLVVG CCEEEEEEECCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA