| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is ifcA [H]
Identifier: 29142592
GI number: 29142592
Start: 2249830
End: 2251233
Strand: Direct
Name: ifcA [H]
Synonym: t2184
Alternate gene names: 29142592
Gene position: 2249830-2251233 (Clockwise)
Preceding gene: 29142591
Following gene: 29142593
Centisome position: 46.95
GC content: 58.33
Gene sequence:
>1404_bases ATGGTTGATGTACTGGTGATAGGCGGAGGCAATGCCGCATTATGCGCCGCCCTGACCGCACGGGAAGCGGGCGCATCGGT TCTGCTGCTGGAGGCTGCCCCGCGAGAATGGCGCGGCGGAAATTCTCAGCACACACGAAACCTGCGCTGTATGCATGATG CGCCGCAGGATGTGCTGGTGGAAAGCTATCCTGAAGAGGAATTCTGGCAGGATCTGTGGCGAGTCACCGACGGCAACACC AACGAGGCGCTGGCGCGGCTGGTCATTCGCACCTCTTCGCAATGCCGCGACTGGATGCGCAAACATGGCGTTAACTTTCA ACCGCCACTATCTGGGGCGCTCCACGTTGCGCGCACCAATGCGTTTTTTATGGGCGGCGGGAAAGCGCTCGTCAATGCCT ATTACCGTAGCGCCGAACGGCTGGGCGTACAGATTCGCTATAACACGCCGGTTCACGCGCTTGAACTTCATGACGGCGAA TTCGTGGCGGCGCTGGCGGGTAGCGAACGTATTACCGCCAAAGCCTGCGTATTAGCGGCTGGCGGTTTCGAATCAAACCG TGAATGGCTGCGGGAGGCCTGGGGAGAAAACGCCCGCGGCGAATGGCCCGCGGATAATTTCCTGATTCGCGGCACGCGTT TTAACCAGGGCGTATTACTCAAATTTATGATGGATGCCGGCGCGGATATCATTGGCGATCCGTCCCAGTCGCACTGCGTA GCGATTGATGCCAGGGCGCCGCTGTACGACGGCGGTATTTGTACTCGCGTGGATTGCGTATCGCTGGGTATTGTCGTGAA TCGCGACGCCGAGCGTTTTTATGATGAAGGCGAAGATTTCTGGCCGAAGCGTTACGCCATTTGGGGGCGGCTGGTGGCTC AACAGCCAGGACAAATTGGCTATTCGATTATTGACAGCAAAGCCATTGGCCACTTTATGCCGCCGGTTTTTCCTGGCGCG CAGGCCAATACGCTGGCTGAACTGGCCTGCCAGTTGGGGCTGGACGCGGAAAAATTTACCCATACCGTCACGCAGTATAA CCAGGCCTGCCAGCCCGGTCATTTTGATCATACCTTGCTTGATGACTGCGCCACCAAAAACCTGACGCCGGCGAAAACCC ACTGGGCGCGCCCGCTTGATGCGCCGCCCTACTACGGTTATGCGCTGCGACCCGGCATCACGTTTACCTACCTGGGCCTG AAAGTCAATGAACGTGCCGCGGTGCATTTTGCCGGTCATCCAAGCCGCAACCTGTTTGTTGCCGGCGAGATGATGGCAGG AAATGTTCTGGGCAAGGGGTATACCGCAGGCGTAGGCATGTCTATCGGCACAACCTTTGGCCGCATTGCGGGAATAGAAG CCGCTCGCGCGGCGCACAAGGAGGCGCAGCATGAAACAGCTTGA
Upstream 100 bases:
>100_bases TAAACCCCTGTTTAGCGCTACCTGATAGCGCGCCGCTTATTTATCCGTATACATTTCAATTACAAATTTAACAAATAGTT AAATGGTACGGGAGTATAAG
Downstream 100 bases:
>100_bases AAAATTAATCATTGAGGCCACCGTGCTTACCGAACCGGAAGCCGAGGTCGAACGCGTCATGCAAGTGTGTAACGCGTGTC GCTACTGCGAAGGTTTTTGC
Product: tricarballylate dehydrogenase
Products: NA
Alternate protein names: Fe(3+)-induced flavocytochrome C3; Ifc3; Iron(III)-induced flavocytochrome C3 [H]
Number of amino acids: Translated: 467; Mature: 467
Protein sequence:
>467_residues MVDVLVIGGGNAALCAALTAREAGASVLLLEAAPREWRGGNSQHTRNLRCMHDAPQDVLVESYPEEEFWQDLWRVTDGNT NEALARLVIRTSSQCRDWMRKHGVNFQPPLSGALHVARTNAFFMGGGKALVNAYYRSAERLGVQIRYNTPVHALELHDGE FVAALAGSERITAKACVLAAGGFESNREWLREAWGENARGEWPADNFLIRGTRFNQGVLLKFMMDAGADIIGDPSQSHCV AIDARAPLYDGGICTRVDCVSLGIVVNRDAERFYDEGEDFWPKRYAIWGRLVAQQPGQIGYSIIDSKAIGHFMPPVFPGA QANTLAELACQLGLDAEKFTHTVTQYNQACQPGHFDHTLLDDCATKNLTPAKTHWARPLDAPPYYGYALRPGITFTYLGL KVNERAAVHFAGHPSRNLFVAGEMMAGNVLGKGYTAGVGMSIGTTFGRIAGIEAARAAHKEAQHETA
Sequences:
>Translated_467_residues MVDVLVIGGGNAALCAALTAREAGASVLLLEAAPREWRGGNSQHTRNLRCMHDAPQDVLVESYPEEEFWQDLWRVTDGNT NEALARLVIRTSSQCRDWMRKHGVNFQPPLSGALHVARTNAFFMGGGKALVNAYYRSAERLGVQIRYNTPVHALELHDGE FVAALAGSERITAKACVLAAGGFESNREWLREAWGENARGEWPADNFLIRGTRFNQGVLLKFMMDAGADIIGDPSQSHCV AIDARAPLYDGGICTRVDCVSLGIVVNRDAERFYDEGEDFWPKRYAIWGRLVAQQPGQIGYSIIDSKAIGHFMPPVFPGA QANTLAELACQLGLDAEKFTHTVTQYNQACQPGHFDHTLLDDCATKNLTPAKTHWARPLDAPPYYGYALRPGITFTYLGL KVNERAAVHFAGHPSRNLFVAGEMMAGNVLGKGYTAGVGMSIGTTFGRIAGIEAARAAHKEAQHETA >Mature_467_residues MVDVLVIGGGNAALCAALTAREAGASVLLLEAAPREWRGGNSQHTRNLRCMHDAPQDVLVESYPEEEFWQDLWRVTDGNT NEALARLVIRTSSQCRDWMRKHGVNFQPPLSGALHVARTNAFFMGGGKALVNAYYRSAERLGVQIRYNTPVHALELHDGE FVAALAGSERITAKACVLAAGGFESNREWLREAWGENARGEWPADNFLIRGTRFNQGVLLKFMMDAGADIIGDPSQSHCV AIDARAPLYDGGICTRVDCVSLGIVVNRDAERFYDEGEDFWPKRYAIWGRLVAQQPGQIGYSIIDSKAIGHFMPPVFPGA QANTLAELACQLGLDAEKFTHTVTQYNQACQPGHFDHTLLDDCATKNLTPAKTHWARPLDAPPYYGYALRPGITFTYLGL KVNERAAVHFAGHPSRNLFVAGEMMAGNVLGKGYTAGVGMSIGTTFGRIAGIEAARAAHKEAQHETA
Specific function: Catalyzes unidirectional fumarate reduction using artificial electron donors such as methyl viologen. The physiological reductant is unknown [H]
COG id: COG1053
COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cytochrome c domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003953 - InterPro: IPR013027 - InterPro: IPR010960 - InterPro: IPR011031 [H]
Pfam domain/function: PF00890 FAD_binding_2 [H]
EC number: =1.3.99.1 [H]
Molecular weight: Translated: 51014; Mature: 51014
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDVLVIGGGNAALCAALTAREAGASVLLLEAAPREWRGGNSQHTRNLRCMHDAPQDVLV CEEEEEECCCCCEEHHHHHHHHCCCEEEEEECCCHHHCCCCCCCCCCEEEECCCCHHHHH ESYPEEEFWQDLWRVTDGNTNEALARLVIRTSSQCRDWMRKHGVNFQPPLSGALHVARTN HCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEEECC AFFMGGGKALVNAYYRSAERLGVQIRYNTPVHALELHDGEFVAALAGSERITAKACVLAA EEEECCCHHHHHHHHHHHHHCEEEEEECCCEEEEEECCCCEEEEECCCCCEEEEEEEEEE GGFESNREWLREAWGENARGEWPADNFLIRGTRFNQGVLLKFMMDAGADIIGDPSQSHCV CCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEEEHHCCCCCCCCCCCCCEE AIDARAPLYDGGICTRVDCVSLGIVVNRDAERFYDEGEDFWPKRYAIWGRLVAQQPGQIG EEECCCCEECCCCEEEEEEEEEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCC YSIIDSKAIGHFMPPVFPGAQANTLAELACQLGLDAEKFTHTVTQYNQACQPGHFDHTLL HHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHH DDCATKNLTPAKTHWARPLDAPPYYGYALRPGITFTYLGLKVNERAAVHFAGHPSRNLFV HHHHCCCCCCCHHHCCCCCCCCCCCCEEECCCCEEEEEEEEECCCEEEEECCCCCCCEEE AGEMMAGNVLGKGYTAGVGMSIGTTFGRIAGIEAARAAHKEAQHETA EECEEECCCCCCCEECCCCCHHHCHHHHHHCHHHHHHHHHHHHCCCC >Mature Secondary Structure MVDVLVIGGGNAALCAALTAREAGASVLLLEAAPREWRGGNSQHTRNLRCMHDAPQDVLV CEEEEEECCCCCEEHHHHHHHHCCCEEEEEECCCHHHCCCCCCCCCCEEEECCCCHHHHH ESYPEEEFWQDLWRVTDGNTNEALARLVIRTSSQCRDWMRKHGVNFQPPLSGALHVARTN HCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEEECC AFFMGGGKALVNAYYRSAERLGVQIRYNTPVHALELHDGEFVAALAGSERITAKACVLAA EEEECCCHHHHHHHHHHHHHCEEEEEECCCEEEEEECCCCEEEEECCCCCEEEEEEEEEE GGFESNREWLREAWGENARGEWPADNFLIRGTRFNQGVLLKFMMDAGADIIGDPSQSHCV CCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEEEHHCCCCCCCCCCCCCEE AIDARAPLYDGGICTRVDCVSLGIVVNRDAERFYDEGEDFWPKRYAIWGRLVAQQPGQIG EEECCCCEECCCCEEEEEEEEEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCC YSIIDSKAIGHFMPPVFPGAQANTLAELACQLGLDAEKFTHTVTQYNQACQPGHFDHTLL HHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHH DDCATKNLTPAKTHWARPLDAPPYYGYALRPGITFTYLGLKVNERAAVHFAGHPSRNLFV HHHHCCCCCCCHHHCCCCCCCCCCCCEEECCCCEEEEEEEEECCCEEEEECCCCCCCEEE AGEMMAGNVLGKGYTAGVGMSIGTTFGRIAGIEAARAAHKEAQHETA EECEEECCCCCCCEECCCCCHHHCHHHHHHCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10455032; 10581549 [H]