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The map label for this gene is ybjX [H]

Identifier: 29142414

GI number: 29142414

Start: 2050913

End: 2051863

Strand: Direct

Name: ybjX [H]

Synonym: t1993

Alternate gene names: 29142414

Gene position: 2050913-2051863 (Clockwise)

Preceding gene: 29142411

Following gene: 29142416

Centisome position: 42.8

GC content: 46.69

Gene sequence:

>951_bases
ATGACACAGCTTACAGATAATACCTGGTACACTTCAGATTACATCTCTCCTTTACAATTATTTATTCGTCTGACGCGCGG
GCAATTACAGCCAGGAAAATTCTGGCGTAAAGCCAGCTTTCGTCGCAAGTTTTTAATCCGCTCATTAGTCATGCCGCGTG
CAACCAGCCAATTACTGACCAATCTCACCCAATGGCCGAAGTTAAATACGTTACTTGCTCGTCAGCCGCGTTTGCCTATT
CGGCTACATCGTCCTTATATGGCTGTAAATATTAAACGCGATTTCGCCTTAGACGCTCTGTGTTTTCATTATCAACAGAT
GCGCCAACTTTTATCGCGGGAACAACAAGTTAGCTATTTAAGTCAGTATGGCCTGAATCTTGCTAAATTTGAAGCTAAAA
CCGGCGAGTTGTTTCAACTTGATTTAGTCAGTCTGGTCTCACTGGATAAAGAAGGTGAAAGCACTATTGTTGTTCGCGAC
GCACAGTTACGTATTCTGGCAGAGATCACATTTACCCTGTGTCGCTTTAACCAACAACGCACACTATTTATCGGCGGATT
ACAGGGCGCGGCAAACGACGTCCCTCACGAAATTATCCAGCAGGCGACCAAAGCCTGCCATGGTCTTTTTCCCAAACGCA
TCGTGATGGAGGCTCTCTGTCAGTTTGCGCAAGTCTTTCAGGCAGAAAAGATTATAGCCGTGAGTAACGATGCGCACGTT
TATCGTAGCTGGCGATACATGGATAAAAAGACGCAAATGCATGCCGACTATGACGCGTTTTGGGAATCGTTAGGCGGTGA
AAGAATTAAAGGGAATTACTATACGCTGCCGCTGGCGATCGCCCGAAAAAGCGAAGCGGAGATCGCCAGTAAAAAACGGG
CCGAGTATCGCCGCCGCTATGCATTACTCGATAGCGTCGTCGAACAGGTTCCGGCCACATTCAAACGCTAA

Upstream 100 bases:

>100_bases
AAACAAACCTGACGCAATAAAGATAGCGCCGGCTGTATTGACGATTGGTTAATGTTTCCTGTGGTTCAATCTCGACAATC
TTATGTCGCGGATTACGATC

Downstream 100 bases:

>100_bases
TCCGCCCGGCCCCGCGCCAGCCAAACCACGCGCGAGAACATCTTTCTGAACAGCGGCGGCACGGCGTCAATTCCGCGCCG
CCCGGCTTCCATCGCGACTT

Product: virK protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MTQLTDNTWYTSDYISPLQLFIRLTRGQLQPGKFWRKASFRRKFLIRSLVMPRATSQLLTNLTQWPKLNTLLARQPRLPI
RLHRPYMAVNIKRDFALDALCFHYQQMRQLLSREQQVSYLSQYGLNLAKFEAKTGELFQLDLVSLVSLDKEGESTIVVRD
AQLRILAEITFTLCRFNQQRTLFIGGLQGAANDVPHEIIQQATKACHGLFPKRIVMEALCQFAQVFQAEKIIAVSNDAHV
YRSWRYMDKKTQMHADYDAFWESLGGERIKGNYYTLPLAIARKSEAEIASKKRAEYRRRYALLDSVVEQVPATFKR

Sequences:

>Translated_316_residues
MTQLTDNTWYTSDYISPLQLFIRLTRGQLQPGKFWRKASFRRKFLIRSLVMPRATSQLLTNLTQWPKLNTLLARQPRLPI
RLHRPYMAVNIKRDFALDALCFHYQQMRQLLSREQQVSYLSQYGLNLAKFEAKTGELFQLDLVSLVSLDKEGESTIVVRD
AQLRILAEITFTLCRFNQQRTLFIGGLQGAANDVPHEIIQQATKACHGLFPKRIVMEALCQFAQVFQAEKIIAVSNDAHV
YRSWRYMDKKTQMHADYDAFWESLGGERIKGNYYTLPLAIARKSEAEIASKKRAEYRRRYALLDSVVEQVPATFKR
>Mature_315_residues
TQLTDNTWYTSDYISPLQLFIRLTRGQLQPGKFWRKASFRRKFLIRSLVMPRATSQLLTNLTQWPKLNTLLARQPRLPIR
LHRPYMAVNIKRDFALDALCFHYQQMRQLLSREQQVSYLSQYGLNLAKFEAKTGELFQLDLVSLVSLDKEGESTIVVRDA
QLRILAEITFTLCRFNQQRTLFIGGLQGAANDVPHEIIQQATKACHGLFPKRIVMEALCQFAQVFQAEKIIAVSNDAHVY
RSWRYMDKKTQMHADYDAFWESLGGERIKGNYYTLPLAIARKSEAEIASKKRAEYRRRYALLDSVVEQVPATFKR

Specific function: Unknown

COG id: COG2990

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0461 [H]

Homologues:

Organism=Escherichia coli, GI1787103, Length=315, Percent_Identity=57.1428571428571, Blast_Score=369, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007488 [H]

Pfam domain/function: PF04393 DUF535 [H]

EC number: NA

Molecular weight: Translated: 36790; Mature: 36659

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQLTDNTWYTSDYISPLQLFIRLTRGQLQPGKFWRKASFRRKFLIRSLVMPRATSQLLT
CCCCCCCCEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
NLTQWPKLNTLLARQPRLPIRLHRPYMAVNIKRDFALDALCFHYQQMRQLLSREQQVSYL
HHHHCCCHHHHHHCCCCCCEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQYGLNLAKFEAKTGELFQLDLVSLVSLDKEGESTIVVRDAQLRILAEITFTLCRFNQQR
HHHCCCCEEEECCCCCEEHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCC
TLFIGGLQGAANDVPHEIIQQATKACHGLFPKRIVMEALCQFAQVFQAEKIIAVSNDAHV
EEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCCHHH
YRSWRYMDKKTQMHADYDAFWESLGGERIKGNYYTLPLAIARKSEAEIASKKRAEYRRRY
HHHHHHHHHHHHHCCCHHHHHHHCCCCEECCCEEEEEHEECCCCHHHHHHHHHHHHHHHH
ALLDSVVEQVPATFKR
HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TQLTDNTWYTSDYISPLQLFIRLTRGQLQPGKFWRKASFRRKFLIRSLVMPRATSQLLT
CCCCCCCEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
NLTQWPKLNTLLARQPRLPIRLHRPYMAVNIKRDFALDALCFHYQQMRQLLSREQQVSYL
HHHHCCCHHHHHHCCCCCCEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQYGLNLAKFEAKTGELFQLDLVSLVSLDKEGESTIVVRDAQLRILAEITFTLCRFNQQR
HHHCCCCEEEECCCCCEEHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCC
TLFIGGLQGAANDVPHEIIQQATKACHGLFPKRIVMEALCQFAQVFQAEKIIAVSNDAHV
EEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCCHHH
YRSWRYMDKKTQMHADYDAFWESLGGERIKGNYYTLPLAIARKSEAEIASKKRAEYRRRY
HHHHHHHHHHHHHCCCHHHHHHHCCCCEECCCEEEEEHEECCCCHHHHHHHHHHHHHHHH
ALLDSVVEQVPATFKR
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]