Click here to switch to the map view.

The map label for this gene is ybjE [H]

Identifier: 29142416

GI number: 29142416

Start: 2053719

End: 2054618

Strand: Direct

Name: ybjE [H]

Synonym: t1995

Alternate gene names: 29142416

Gene position: 2053719-2054618 (Clockwise)

Preceding gene: 29142414

Following gene: 29142417

Centisome position: 42.86

GC content: 50.67

Gene sequence:

>900_bases
ATGTTTTCAGGACTTTTAATCATTCTGGTTCCACTGATTGTGGGCTATCTCATTCCACTGCGACATAAAGCCGCATTACA
ACTCATTAACCGGCTACTGAGCTGGATCGTGTACCTTATTCTCTTTTTTATGGGAATAAGCCTGGCGTTTTTGGATAACC
TCGCCAGTAATCTGGTGGCGATTTTTCATTATTCCGCCGTCAGTATTACGATTATTTTATTGTGTAATATCGCCGCCTTA
TTGTGGCTGGAACGTATCCTCCCGTGGCGTCACCATCATCAGCAGGAAAAACTGCCTTCGCGTATTGCCATGGCGCTGGA
GTCGCTGCAACTGTGCGGCGTAGTGGTATTGGGGTTTATCATCGGCCTGAGCGGACTCTCTGTTTTACAGCACGCCACCG
AAGCCAGTGAATATACGCTGATCTTTTTATTGTTCCTGGTGGGGATTCAGCTACGAAATAGCGGCATGACCTTAAAGCAA
ATTGTGCTTAACCGCCGGGGAATGATGGTCGCGGTCGTTGTCGTGGCAAGCTCATTACTGGGCGGCGTGATTAATGCGTT
TATCCTGGACTTACCGCTAAAAACCGCCATGGCGATGGCGTCAGGTTTCGGCTGGTACTCTCTTTCCGGTATTTTGCTGA
CGGAGTCGTTTGGACCGGTTATCGGCAGCGCGGCATTTTTTAACGATCTGGCCCGCGAACTTTTGGCCATTATGCTTATT
CCCGGTCTGGTTCGCCGCAGCCGTTCAACGGCGTTGGGCCTGTGCGGAGCGACCTCAATGGACTTTACGTTGCCGGTATT
ACAGCGCTCCGGTGGCGTAGAGATTGTTCCGGCGGCTATCGTACATGGCTTTATCCTCAGCCTGCTGGTACCTCTCTTAA
TGGCGTTCTTCTCGGCCTGA

Upstream 100 bases:

>100_bases
GTCTGATAAATGTACGGCTGACGGTGTCGCTTTACTGATAGTCTGGAATTCGGTAGTGTCATGTACGCTATTCAAACAAT
AAAAAAGGGCCCGGCTGTTC

Downstream 100 bases:

>100_bases
TACCTCTCTGGCGGTAGGTATCTGCCGCCAAAATTGCGCTAAATCAATCTCCTTGCACATTATGGCAGAAATCCCTTTTA
TCCCTTTGTTCACAGGCATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MFSGLLIILVPLIVGYLIPLRHKAALQLINRLLSWIVYLILFFMGISLAFLDNLASNLVAIFHYSAVSITIILLCNIAAL
LWLERILPWRHHHQQEKLPSRIAMALESLQLCGVVVLGFIIGLSGLSVLQHATEASEYTLIFLLFLVGIQLRNSGMTLKQ
IVLNRRGMMVAVVVVASSLLGGVINAFILDLPLKTAMAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELLAIMLI
PGLVRRSRSTALGLCGATSMDFTLPVLQRSGGVEIVPAAIVHGFILSLLVPLLMAFFSA

Sequences:

>Translated_299_residues
MFSGLLIILVPLIVGYLIPLRHKAALQLINRLLSWIVYLILFFMGISLAFLDNLASNLVAIFHYSAVSITIILLCNIAAL
LWLERILPWRHHHQQEKLPSRIAMALESLQLCGVVVLGFIIGLSGLSVLQHATEASEYTLIFLLFLVGIQLRNSGMTLKQ
IVLNRRGMMVAVVVVASSLLGGVINAFILDLPLKTAMAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELLAIMLI
PGLVRRSRSTALGLCGATSMDFTLPVLQRSGGVEIVPAAIVHGFILSLLVPLLMAFFSA
>Mature_299_residues
MFSGLLIILVPLIVGYLIPLRHKAALQLINRLLSWIVYLILFFMGISLAFLDNLASNLVAIFHYSAVSITIILLCNIAAL
LWLERILPWRHHHQQEKLPSRIAMALESLQLCGVVVLGFIIGLSGLSVLQHATEASEYTLIFLLFLVGIQLRNSGMTLKQ
IVLNRRGMMVAVVVVASSLLGGVINAFILDLPLKTAMAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELLAIMLI
PGLVRRSRSTALGLCGATSMDFTLPVLQRSGGVEIVPAAIVHGFILSLLVPLLMAFFSA

Specific function: Unknown

COG id: COG2431

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1452 [H]

Homologues:

Organism=Escherichia coli, GI87081795, Length=299, Percent_Identity=88.628762541806, Blast_Score=520, Evalue=1e-149,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005642
- ProDom:   PD022789 [H]

Pfam domain/function: PF03956 DUF340 [H]

EC number: NA

Molecular weight: Translated: 32466; Mature: 32466

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSGLLIILVPLIVGYLIPLRHKAALQLINRLLSWIVYLILFFMGISLAFLDNLASNLVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFHYSAVSITIILLCNIAALLWLERILPWRHHHQQEKLPSRIAMALESLQLCGVVVLGFI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGLSGLSVLQHATEASEYTLIFLLFLVGIQLRNSGMTLKQIVLNRRGMMVAVVVVASSLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHH
GGVINAFILDLPLKTAMAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELLAIMLI
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHH
PGLVRRSRSTALGLCGATSMDFTLPVLQRSGGVEIVPAAIVHGFILSLLVPLLMAFFSA
HHHHHHCCCHHHHHCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFSGLLIILVPLIVGYLIPLRHKAALQLINRLLSWIVYLILFFMGISLAFLDNLASNLVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFHYSAVSITIILLCNIAALLWLERILPWRHHHQQEKLPSRIAMALESLQLCGVVVLGFI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGLSGLSVLQHATEASEYTLIFLLFLVGIQLRNSGMTLKQIVLNRRGMMVAVVVVASSLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHH
GGVINAFILDLPLKTAMAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELLAIMLI
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHH
PGLVRRSRSTALGLCGATSMDFTLPVLQRSGGVEIVPAAIVHGFILSLLVPLLMAFFSA
HHHHHHCCCHHHHHCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]