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The map label for this gene is ycaO [H]

Identifier: 29142382

GI number: 29142382

Start: 2010097

End: 2011866

Strand: Direct

Name: ycaO [H]

Synonym: t1959

Alternate gene names: 29142382

Gene position: 2010097-2011866 (Clockwise)

Preceding gene: 29142368

Following gene: 29142383

Centisome position: 41.95

GC content: 52.54

Gene sequence:

>1770_bases
GTGATTTTCATGACGCAAACATTTATTCCCGGCAAAGACGCCGCGCTGGAAGACTCCATCGCCCGCTTCCAGCAAAAGTT
ACTCGACCTCGGCTTTCACATCGAAGAGGCCTCCTGGCTGAACCCGGTGCCAAACGTCTGGTCAGTGCATATTCGCGATA
AAGAGTGCGCGTTATGCTTTACCAACGGAAAAGGCGCGACCAAAAAAGCGGCGCTGGCCTCGGCGCTGGGCGAATACTTC
GAGCGTCTGTCAACCAACTACTTTTTTGCTGATTTCTGGCTTGGCGAAACGATCGCCAACGGGCCATTCGTGCATTATCC
GAATGAAAAGTGGTTCTCGCTGACTGAAAATGACGACGTACCGGAAGGCTTGCTTGATGCCCGTCTGCGCGCGTTTTACG
ATCCGGAAAATGAACTCACCGGAAGCCAGTTAATTGATCTTCAGTCCGGCAATGAAGAACGCGGCGTCTGCGGCCTGCCA
TTTACCCGTCAGTCCGATAACCAGACCGTGTATATTCCGATGAATATTATCGGCAACCTGTACGTCTCTAACGGAATGTC
CGCCGGCAATACGCGTAATGAAGCCCGCGTTCAGGGACTGTCGGAAGTCTTCGAGCGTTATGTGAAAAATCGCATCATTG
CGGAAAGTATCAGTCTGCCGGAGATTCCCGCAGAGGTGATGGCGCGTTATCCGGCGGTAATGGAGTCAATCGCCACGCTG
GAAGCCGAGGGTTTCCCGATTTTCGCCTATGACGGCTCGCTGGGCGGTAAGTATCCGGTTATCTGCGTCGTGCTGTTCAA
CCCGGCTAACGGTACCTGCTTTGCTTCTTTTGGCGCCCATCCTGACTTTGGCGTTGCGCTGGAACGTACAGTGACCGAGC
TACTCCAGGGACGCGGTCTGAAAGATCTTGATGTCTTCACGCCGCCAACGTTCGATGATGAAGAAGTCGCGGAGCACACT
AATCTGGAGACCCACTTCATCGACTCCAGCGGCCTGATTTCCTGGGATCTGTTCAAACAGGACGCCGATTACCCGTTCAC
GGACTGGAGTTTCTCCGGCACTACCGAAGAAGAATTCGCCACGCTGATGGCCATCTTCGCTGCTGAAGATAAAGAAGTTT
ACATTGCCGATTACGAGCATCTCGGCGTATACGCCTGTCGTATTATCGTACCGGGAATGTCTGATATTTATCCTGCCGAA
GATCTGTGGCTGGCCAACAACAATATGGGTAGCCATCTTCGTGAGATTCTGCTTTCGCTGCCCGGTAGCGCCTGGAATAA
AGAAGACTATCTCAATCTGATTGAACAATTGGATGAAGAAGGTTTTGACGATTTCACCCGCGTGCGTGAACTGTTGGGTC
TGGCGACCGGAGCGGACAATGGTTGGTATACACTGCGCGTCGGCGAATTAAAAGCAATGCTAGCGTTAGCGGGCGGCGAT
TTGGAGCAGGCGCTAATCTGGACAGAATGGACGATGGAGTTCAATTCGTCGGTCTTTAGTCCGGTACGCGCAAACTATTA
CCGTTGCCTGCAAACGCTGCTGCTCCTGTCGCAAGAAGATGCGCGTCAGCCGCTGCAATATCTCAATGCTTTTATAAAAA
TGTATGGCGCAGAGGCTGTAGAAGCCGCCAGCACCGCGCTTAGCGGTGAAGCGGCTTTTTATGGACTACCGGCTGTCGAC
CACGATCTACAAGCGTTCCCGGCGCATCAGTCCTTGTTAAAAGCGTATGATAAATTACAGCGCGCGAAAGCGGCATACTG
GTCAAAATAA

Upstream 100 bases:

>100_bases
TGTAAAAGCATAGCCAATACTTTTATTTCCGCCGACGTCCCGGCGAGATAGCGCCCGTCACATAAAACCCGTATCATTGC
GCGCTTTCCGTACGACAAAA

Downstream 100 bases:

>100_bases
GGCCATATGAGTGACTTAGGGTAGGTTTACCCTCTCGGCTGCGTTATATTACGGGGCGCCTTTGCGGCCCCGTTTTATTT
ATTTTCACTAAACGGCGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 589; Mature: 589

Protein sequence:

>589_residues
MIFMTQTFIPGKDAALEDSIARFQQKLLDLGFHIEEASWLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYF
ERLSTNYFFADFWLGETIANGPFVHYPNEKWFSLTENDDVPEGLLDARLRAFYDPENELTGSQLIDLQSGNEERGVCGLP
FTRQSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPAEVMARYPAVMESIATL
EAEGFPIFAYDGSLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHT
NLETHFIDSSGLISWDLFKQDADYPFTDWSFSGTTEEEFATLMAIFAAEDKEVYIADYEHLGVYACRIIVPGMSDIYPAE
DLWLANNNMGSHLREILLSLPGSAWNKEDYLNLIEQLDEEGFDDFTRVRELLGLATGADNGWYTLRVGELKAMLALAGGD
LEQALIWTEWTMEFNSSVFSPVRANYYRCLQTLLLLSQEDARQPLQYLNAFIKMYGAEAVEAASTALSGEAAFYGLPAVD
HDLQAFPAHQSLLKAYDKLQRAKAAYWSK

Sequences:

>Translated_589_residues
MIFMTQTFIPGKDAALEDSIARFQQKLLDLGFHIEEASWLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYF
ERLSTNYFFADFWLGETIANGPFVHYPNEKWFSLTENDDVPEGLLDARLRAFYDPENELTGSQLIDLQSGNEERGVCGLP
FTRQSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPAEVMARYPAVMESIATL
EAEGFPIFAYDGSLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHT
NLETHFIDSSGLISWDLFKQDADYPFTDWSFSGTTEEEFATLMAIFAAEDKEVYIADYEHLGVYACRIIVPGMSDIYPAE
DLWLANNNMGSHLREILLSLPGSAWNKEDYLNLIEQLDEEGFDDFTRVRELLGLATGADNGWYTLRVGELKAMLALAGGD
LEQALIWTEWTMEFNSSVFSPVRANYYRCLQTLLLLSQEDARQPLQYLNAFIKMYGAEAVEAASTALSGEAAFYGLPAVD
HDLQAFPAHQSLLKAYDKLQRAKAAYWSK
>Mature_589_residues
MIFMTQTFIPGKDAALEDSIARFQQKLLDLGFHIEEASWLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYF
ERLSTNYFFADFWLGETIANGPFVHYPNEKWFSLTENDDVPEGLLDARLRAFYDPENELTGSQLIDLQSGNEERGVCGLP
FTRQSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPAEVMARYPAVMESIATL
EAEGFPIFAYDGSLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHT
NLETHFIDSSGLISWDLFKQDADYPFTDWSFSGTTEEEFATLMAIFAAEDKEVYIADYEHLGVYACRIIVPGMSDIYPAE
DLWLANNNMGSHLREILLSLPGSAWNKEDYLNLIEQLDEEGFDDFTRVRELLGLATGADNGWYTLRVGELKAMLALAGGD
LEQALIWTEWTMEFNSSVFSPVRANYYRCLQTLLLLSQEDARQPLQYLNAFIKMYGAEAVEAASTALSGEAAFYGLPAVD
HDLQAFPAHQSLLKAYDKLQRAKAAYWSK

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family [H]

Homologues:

Organism=Escherichia coli, GI87081799, Length=586, Percent_Identity=92.8327645051195, Blast_Score=1121, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003776 [H]

Pfam domain/function: PF02624 YcaO [H]

EC number: NA

Molecular weight: Translated: 65837; Mature: 65837

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFMTQTFIPGKDAALEDSIARFQQKLLDLGFHIEEASWLNPVPNVWSVHIRDKECALCF
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEEE
TNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFSLTENDDV
ECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHCHHHCCCCEEECCCCCEEEECCCCCC
PEGLLDARLRAFYDPENELTGSQLIDLQSGNEERGVCGLPFTRQSDNQTVYIPMNIIGNL
CHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCCEEEEEHHHHCCC
YVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPAEVMARYPAVMESIATL
CEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
EAEGFPIFAYDGSLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGL
CCCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCC
KDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFTDWSFSGTTEEEFA
CCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCEEEEHHHCCCCCCCCCCCCCCCCHHHHH
TLMAIFAAEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNNMGSHLREILLSL
HHHHHHCCCCCEEEEEECHHCCEEEEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHC
PGSAWNKEDYLNLIEQLDEEGFDDFTRVRELLGLATGADNGWYTLRVGELKAMLALAGGD
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCC
LEQALIWTEWTMEFNSSVFSPVRANYYRCLQTLLLLSQEDARQPLQYLNAFIKMYGAEAV
HHHEEEEEEEHHHHCCHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHH
EAASTALSGEAAFYGLPAVDHDLQAFPAHQSLLKAYDKLQRAKAAYWSK
HHHHHHCCCCCEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIFMTQTFIPGKDAALEDSIARFQQKLLDLGFHIEEASWLNPVPNVWSVHIRDKECALCF
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEEE
TNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFSLTENDDV
ECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHCHHHCCCCEEECCCCCEEEECCCCCC
PEGLLDARLRAFYDPENELTGSQLIDLQSGNEERGVCGLPFTRQSDNQTVYIPMNIIGNL
CHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCCEEEEEHHHHCCC
YVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPAEVMARYPAVMESIATL
CEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
EAEGFPIFAYDGSLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGL
CCCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCC
KDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFTDWSFSGTTEEEFA
CCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCEEEEHHHCCCCCCCCCCCCCCCCHHHHH
TLMAIFAAEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNNMGSHLREILLSL
HHHHHHCCCCCEEEEEECHHCCEEEEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHC
PGSAWNKEDYLNLIEQLDEEGFDDFTRVRELLGLATGADNGWYTLRVGELKAMLALAGGD
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCC
LEQALIWTEWTMEFNSSVFSPVRANYYRCLQTLLLLSQEDARQPLQYLNAFIKMYGAEAV
HHHEEEEEEEHHHHCCHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHH
EAASTALSGEAAFYGLPAVDHDLQAFPAHQSLLKAYDKLQRAKAAYWSK
HHHHHHCCCCCEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]