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The map label for this gene is 29142327

Identifier: 29142327

GI number: 29142327

Start: 1954878

End: 1955267

Strand: Reverse

Name: 29142327

Synonym: t1901

Alternate gene names: NA

Gene position: 1955267-1954878 (Counterclockwise)

Preceding gene: 29142329

Following gene: 29142326

Centisome position: 40.8

GC content: 48.46

Gene sequence:

>390_bases
ATGTCCGAACCTGTATCCAGTGCGACAGTGTTGGCTGGTGGATTAATGGGGGCCAGTGTATTCGGTCTGGCAACCGGAAC
CGATTATGGTGTGGTATTCGGCGCTTTTGCCGGCTCGGTATTTTATGTCGCCACGGCAACCAACATCGGACGCATCAGGC
TGGTCGCTTATTTTATCACGTCATTTATTGTGGGAGTGCTTGGCGCCGGGCTGATAGGTACTAAGCTTGCGGCAATAACG
CATTATGAAAAACCACTGGATGCACTTGGCGCAGTAATTATTTCTGCAATGTGTATAAAGTTTCTCACTTTTCTCAACAG
TCAGGATCTGAACACTCTGTTCAGTATTCTCTCTCGTATCAGGGGAGGGGGATCAGATGGTAGCAAATGA

Upstream 100 bases:

>100_bases
TAATTGTGTTCTTTATGAATAAATATCCTCCGGCTATGCCGGAGGATATTTATTATTTCCCCTCATAACTGAGAGGACCC
ACACAACCAGAGGGGGATGA

Downstream 100 bases:

>100_bases
CCCTTCTGCAGTTCTGAATGCCGTAATTTGTGGGGTAATAGTCATCGTTCTGATGTTTTACCGACGCGGTGATGCGACAC
ACCGCCCCCTGATTTCGTTA

Product: prophage membrane protein

Products: NA

Alternate protein names: Phage Holin

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MSEPVSSATVLAGGLMGASVFGLATGTDYGVVFGAFAGSVFYVATATNIGRIRLVAYFITSFIVGVLGAGLIGTKLAAIT
HYEKPLDALGAVIISAMCIKFLTFLNSQDLNTLFSILSRIRGGGSDGSK

Sequences:

>Translated_129_residues
MSEPVSSATVLAGGLMGASVFGLATGTDYGVVFGAFAGSVFYVATATNIGRIRLVAYFITSFIVGVLGAGLIGTKLAAIT
HYEKPLDALGAVIISAMCIKFLTFLNSQDLNTLFSILSRIRGGGSDGSK
>Mature_128_residues
SEPVSSATVLAGGLMGASVFGLATGTDYGVVFGAFAGSVFYVATATNIGRIRLVAYFITSFIVGVLGAGLIGTKLAAITH
YEKPLDALGAVIISAMCIKFLTFLNSQDLNTLFSILSRIRGGGSDGSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13219; Mature: 13087

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPVSSATVLAGGLMGASVFGLATGTDYGVVFGAFAGSVFYVATATNIGRIRLVAYFIT
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHH
SFIVGVLGAGLIGTKLAAITHYEKPLDALGAVIISAMCIKFLTFLNSQDLNTLFSILSRI
HHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
RGGGSDGSK
CCCCCCCCC
>Mature Secondary Structure 
SEPVSSATVLAGGLMGASVFGLATGTDYGVVFGAFAGSVFYVATATNIGRIRLVAYFIT
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHH
SFIVGVLGAGLIGTKLAAITHYEKPLDALGAVIISAMCIKFLTFLNSQDLNTLFSILSRI
HHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
RGGGSDGSK
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA