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The map label for this gene is 29142326

Identifier: 29142326

GI number: 29142326

Start: 1954610

End: 1954891

Strand: Reverse

Name: 29142326

Synonym: t1900

Alternate gene names: NA

Gene position: 1954891-1954610 (Counterclockwise)

Preceding gene: 29142327

Following gene: 29142325

Centisome position: 40.8

GC content: 51.06

Gene sequence:

>282_bases
ATGGTAGCAAATGACCCTTCTGCAGTTCTGAATGCCGTAATTTGTGGGGTAATAGTCATCGTTCTGATGTTTTACCGACG
CGGTGATGCGACACACCGCCCCCTGATTTCGTTACTGGCCTATGTCATGGTGCTGGTGTATGCCAGTGTCCCTTTCCGGT
TTGTTTTTGGTTTATATGAATCATCCCACTGGCTGGTGGTGATGGTGAATATCCTTATCTGCGCCGCTGTGCTGTGGGCT
CGCGGTAATGTGGCGCGTCTGGTTGATGCTCTGAGGCACTGA

Upstream 100 bases:

>100_bases
ATTATTTCTGCAATGTGTATAAAGTTTCTCACTTTTCTCAACAGTCAGGATCTGAACACTCTGTTCAGTATTCTCTCTCG
TATCAGGGGAGGGGGATCAG

Downstream 100 bases:

>100_bases
TGAATCAACAACAATTTCAGCAGGCGGCTGGTATTAGCGCCGGGCTTTCTGCGCGCTGGTATCCGTATATTACGGCGGCA
ATGAGCGAATTCGGTATCAC

Product: prophage membrane protein

Products: NA

Alternate protein names: Phage Holin

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MVANDPSAVLNAVICGVIVIVLMFYRRGDATHRPLISLLAYVMVLVYASVPFRFVFGLYESSHWLVVMVNILICAAVLWA
RGNVARLVDALRH

Sequences:

>Translated_93_residues
MVANDPSAVLNAVICGVIVIVLMFYRRGDATHRPLISLLAYVMVLVYASVPFRFVFGLYESSHWLVVMVNILICAAVLWA
RGNVARLVDALRH
>Mature_93_residues
MVANDPSAVLNAVICGVIVIVLMFYRRGDATHRPLISLLAYVMVLVYASVPFRFVFGLYESSHWLVVMVNILICAAVLWA
RGNVARLVDALRH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10359; Mature: 10359

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVANDPSAVLNAVICGVIVIVLMFYRRGDATHRPLISLLAYVMVLVYASVPFRFVFGLYE
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SSHWLVVMVNILICAAVLWARGNVARLVDALRH
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
>Mature Secondary Structure
MVANDPSAVLNAVICGVIVIVLMFYRRGDATHRPLISLLAYVMVLVYASVPFRFVFGLYE
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SSHWLVVMVNILICAAVLWARGNVARLVDALRH
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA