Click here to switch to the map view.

The map label for this gene is msgA [H]

Identifier: 29142291

GI number: 29142291

Start: 1928058

End: 1928336

Strand: Direct

Name: msgA [H]

Synonym: t1864

Alternate gene names: 29142291

Gene position: 1928058-1928336 (Clockwise)

Preceding gene: 29142287

Following gene: 29142292

Centisome position: 40.24

GC content: 46.95

Gene sequence:

>279_bases
ATGTTCGTAGAACTGGTTTATGACAAGCGTAATGTTGAAGGACTCGAAGGGGCCAGCGAGATCATTCTGGCCGAACTGAC
GAAGCGGATGCACCAGATTTTCCCTGATGCCGAAGTGAGGGTGAAGCCGATGCAGGCAAACTGCTTGAATAGTGATACCA
ACAAAAGCGATCGCGAAAAGTTAAACAGGTGGCTTGGCTGGTTTCAGATTACGCGGGTAGGATCAGATCACTCCAAATAC
CGACGACATAGAATTAGGAATTCAGTGATGAATCAATGA

Upstream 100 bases:

>100_bases
GTATGTTCCCCAAAATTTAAAAACAAGTGGTTCATGCCTTGACAGACAAAACCGCCAAAGCAAAATACTGTATATAAAAA
CAGTGGCTGGCGAAGCACGT

Downstream 100 bases:

>100_bases
TGGCAATACACTGTTCAGAATGCCATCGCGTATATGCGAGCACAGTGCCCGTATTAGAGAACATCGGAGACGGGAAGTAA
AGTATCGGGGTCTGGTAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MFVELVYDKRNVEGLEGASEIILAELTKRMHQIFPDAEVRVKPMQANCLNSDTNKSDREKLNRWLGWFQITRVGSDHSKY
RRHRIRNSVMNQ

Sequences:

>Translated_92_residues
MFVELVYDKRNVEGLEGASEIILAELTKRMHQIFPDAEVRVKPMQANCLNSDTNKSDREKLNRWLGWFQITRVGSDHSKY
RRHRIRNSVMNQ
>Mature_92_residues
MFVELVYDKRNVEGLEGASEIILAELTKRMHQIFPDAEVRVKPMQANCLNSDTNKSDREKLNRWLGWFQITRVGSDHSKY
RRHRIRNSVMNQ

Specific function: Affects survival in macrophages [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dinI family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010391 [H]

Pfam domain/function: PF06183 DinI [H]

EC number: NA

Molecular weight: Translated: 10904; Mature: 10904

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVELVYDKRNVEGLEGASEIILAELTKRMHQIFPDAEVRVKPMQANCLNSDTNKSDREK
CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHH
LNRWLGWFQITRVGSDHSKYRRHRIRNSVMNQ
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFVELVYDKRNVEGLEGASEIILAELTKRMHQIFPDAEVRVKPMQANCLNSDTNKSDREK
CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHH
LNRWLGWFQITRVGSDHSKYRRHRIRNSVMNQ
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]