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The map label for this gene is ycbX [H]

Identifier: 29142287

GI number: 29142287

Start: 1921988

End: 1923097

Strand: Direct

Name: ycbX [H]

Synonym: t1860

Alternate gene names: 29142287

Gene position: 1921988-1923097 (Clockwise)

Preceding gene: 29142280

Following gene: 29142291

Centisome position: 40.11

GC content: 55.41

Gene sequence:

>1110_bases
GTGGCGACGTTATCACGGCTCTTTATTCATCCGGTCAAATCCATGCGCGGCATTGGCCTGACTCATGCGCTGGCAGATAT
CAGCGGCCTGGCTTTTGATCGCATCTTCATGGTAACCGAGTCTGACGGCACATTTATTACCGCCCGCCAGTTTCCACAAA
TGGTACGTTTTACCCCCTCTCCCTTACACGACGGCCTCCATTTGACCGCGCCAGACGGCAGCAGCGCGCTGGTTCGCTTT
ACGGATTTCACCCCGCAGGATGCGCCGACCGAGGTCTGGGGAAACCATTTTACCGCTCGCGTCGCCCCGACGGCGATTAA
TCAATGGTTGAGCGGCTTTTTCTCCCGCGATGTCCAGTTGTGCTGGGTTGGGCCGCAGTTGACGCGCCGGGTTAAACGGC
ATAACGCGGTGCCGCTGGGATTTGCCGATGGCTACCCGTATTTATTGACCAACGAAGCCTCACTGCGCGATCTGCAACAG
CGTTGTCCGGCAGGCGTACAAATGGAACAATTTCGCCCAAACTTAGTGGTTTCCGGCGTAGCGGCCTGGGAGGAAGATAG
CTGGAAAGTGCTTCGCATTGGCGATGTGATTTTTGACGTCGTGAAGCCCTGTAGTCGCTGTATTTTTACGACCGTCAGCC
CTGAAAAGGGGCAAAAACATCCTTCCGGCGAACCGCTGGCGACACTGCAAGCTTTTCGTACCGCCCAGGACAATGGCGAT
GTGGATTTCGGTCAGAATCTGATTGCCCGCAATAGCGGCGTCATTCGCGTCGGCGATGAGGTGGAGATACTGGCGACAGC
GCCGGCAAAAGCTTATGGCGCCACAACGCTCGACGACAGCGTTACGCCAGAGAAACACCCGGACGGGAGTGTAACCATCG
ACTGGCAGGGGCAAACCTTCTGCGGGAATAATCAACAGGTGCTACTGGAACAGTTGGAGAATCAGGGAATTCGTATTCCG
TATTCTTGCCGGGCTGGTATCTGTGGTTGCTGCCGGATACGTTTGCTGGAAGGCGAAGTAAGTCCGCTGAAAAAATCGGC
TATGGGTGACGATGGTACGATTCTGAGCTGTAGCTGCGTGCCTAAGACCGCGTTACGACTGGAAAATTAA

Upstream 100 bases:

>100_bases
ATATTGTCACTTTTACGCTAAGAAAATTGTTGCGCATTATAGCTAATCTCACGCCCATGTCATAAAGTTGAAGGCTTATT
TTCATTTGAGGGACTGTACG

Downstream 100 bases:

>100_bases
ACCGCTTGTTCAAGGCTGAAACTGTGACAGTGAACCTGCGGTTTCAGCCTGTCGTTCATAATTTTAATCGCATCGCCAAG
CTGCATGGTTCGGCCTGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MATLSRLFIHPVKSMRGIGLTHALADISGLAFDRIFMVTESDGTFITARQFPQMVRFTPSPLHDGLHLTAPDGSSALVRF
TDFTPQDAPTEVWGNHFTARVAPTAINQWLSGFFSRDVQLCWVGPQLTRRVKRHNAVPLGFADGYPYLLTNEASLRDLQQ
RCPAGVQMEQFRPNLVVSGVAAWEEDSWKVLRIGDVIFDVVKPCSRCIFTTVSPEKGQKHPSGEPLATLQAFRTAQDNGD
VDFGQNLIARNSGVIRVGDEVEILATAPAKAYGATTLDDSVTPEKHPDGSVTIDWQGQTFCGNNQQVLLEQLENQGIRIP
YSCRAGICGCCRIRLLEGEVSPLKKSAMGDDGTILSCSCVPKTALRLEN

Sequences:

>Translated_369_residues
MATLSRLFIHPVKSMRGIGLTHALADISGLAFDRIFMVTESDGTFITARQFPQMVRFTPSPLHDGLHLTAPDGSSALVRF
TDFTPQDAPTEVWGNHFTARVAPTAINQWLSGFFSRDVQLCWVGPQLTRRVKRHNAVPLGFADGYPYLLTNEASLRDLQQ
RCPAGVQMEQFRPNLVVSGVAAWEEDSWKVLRIGDVIFDVVKPCSRCIFTTVSPEKGQKHPSGEPLATLQAFRTAQDNGD
VDFGQNLIARNSGVIRVGDEVEILATAPAKAYGATTLDDSVTPEKHPDGSVTIDWQGQTFCGNNQQVLLEQLENQGIRIP
YSCRAGICGCCRIRLLEGEVSPLKKSAMGDDGTILSCSCVPKTALRLEN
>Mature_368_residues
ATLSRLFIHPVKSMRGIGLTHALADISGLAFDRIFMVTESDGTFITARQFPQMVRFTPSPLHDGLHLTAPDGSSALVRFT
DFTPQDAPTEVWGNHFTARVAPTAINQWLSGFFSRDVQLCWVGPQLTRRVKRHNAVPLGFADGYPYLLTNEASLRDLQQR
CPAGVQMEQFRPNLVVSGVAAWEEDSWKVLRIGDVIFDVVKPCSRCIFTTVSPEKGQKHPSGEPLATLQAFRTAQDNGDV
DFGQNLIARNSGVIRVGDEVEILATAPAKAYGATTLDDSVTPEKHPDGSVTIDWQGQTFCGNNQQVLLEQLENQGIRIPY
SCRAGICGCCRIRLLEGEVSPLKKSAMGDDGTILSCSCVPKTALRLEN

Specific function: Unknown

COG id: COG3217

COG function: function code R; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

Organism=Homo sapiens, GI224600454, Length=283, Percent_Identity=33.9222614840989, Blast_Score=135, Evalue=6e-32,
Organism=Homo sapiens, GI31542713, Length=286, Percent_Identity=30.0699300699301, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI157388923, Length=241, Percent_Identity=22.4066390041494, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI1787179, Length=367, Percent_Identity=86.1035422343324, Blast_Score=670, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17540702, Length=284, Percent_Identity=30.2816901408451, Blast_Score=122, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI17561286, Length=256, Percent_Identity=30.078125, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71990971, Length=265, Percent_Identity=29.4339622641509, Blast_Score=101, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI25147498, Length=238, Percent_Identity=27.3109243697479, Blast_Score=78, Evalue=8e-15,
Organism=Drosophila melanogaster, GI45550400, Length=289, Percent_Identity=27.3356401384083, Blast_Score=93, Evalue=3e-19,
Organism=Drosophila melanogaster, GI17647607, Length=259, Percent_Identity=27.4131274131274, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR005302
- InterPro:   IPR005303
- InterPro:   IPR011037 [H]

Pfam domain/function: PF00111 Fer2; PF03473 MOSC; PF03476 MOSC_N [H]

EC number: NA

Molecular weight: Translated: 40444; Mature: 40313

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLSRLFIHPVKSMRGIGLTHALADISGLAFDRIFMVTESDGTFITARQFPQMVRFTPS
CCCHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEEEECCCCCEEEHHHCCHHHHCCCC
PLHDGLHLTAPDGSSALVRFTDFTPQDAPTEVWGNHFTARVAPTAINQWLSGFFSRDVQL
CCCCCCEEECCCCCCEEEEEECCCCCCCCHHHHCCCEEEEECHHHHHHHHHHHHCCCEEE
CWVGPQLTRRVKRHNAVPLGFADGYPYLLTNEASLRDLQQRCPAGVQMEQFRPNLVVSGV
EEECHHHHHHHHHCCCCEEEECCCCCEEEECCHHHHHHHHHCCCCCCHHHCCCCEEEEEE
AAWEEDSWKVLRIGDVIFDVVKPCSRCIFTTVSPEKGQKHPSGEPLATLQAFRTAQDNGD
EECCCCCEEEEEHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCC
VDFGQNLIARNSGVIRVGDEVEILATAPAKAYGATTLDDSVTPEKHPDGSVTIDWQGQTF
CCCCCHHHHCCCCEEEECCCEEEEEECCCHHCCCCCCCCCCCCCCCCCCCEEEEECCCEE
CGNNQQVLLEQLENQGIRIPYSCRAGICGCCRIRLLEGEVSPLKKSAMGDDGTILSCSCV
ECCCHHHHHHHHHCCCEEEEHHCCCCCCEEEEEEEECCCCCHHHHHCCCCCCCEEEEECC
PKTALRLEN
CCCHHCCCC
>Mature Secondary Structure 
ATLSRLFIHPVKSMRGIGLTHALADISGLAFDRIFMVTESDGTFITARQFPQMVRFTPS
CCHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEEEECCCCCEEEHHHCCHHHHCCCC
PLHDGLHLTAPDGSSALVRFTDFTPQDAPTEVWGNHFTARVAPTAINQWLSGFFSRDVQL
CCCCCCEEECCCCCCEEEEEECCCCCCCCHHHHCCCEEEEECHHHHHHHHHHHHCCCEEE
CWVGPQLTRRVKRHNAVPLGFADGYPYLLTNEASLRDLQQRCPAGVQMEQFRPNLVVSGV
EEECHHHHHHHHHCCCCEEEECCCCCEEEECCHHHHHHHHHCCCCCCHHHCCCCEEEEEE
AAWEEDSWKVLRIGDVIFDVVKPCSRCIFTTVSPEKGQKHPSGEPLATLQAFRTAQDNGD
EECCCCCEEEEEHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCC
VDFGQNLIARNSGVIRVGDEVEILATAPAKAYGATTLDDSVTPEKHPDGSVTIDWQGQTF
CCCCCHHHHCCCCEEEECCCEEEEEECCCHHCCCCCCCCCCCCCCCCCCCEEEEECCCEE
CGNNQQVLLEQLENQGIRIPYSCRAGICGCCRIRLLEGEVSPLKKSAMGDDGTILSCSCV
ECCCHHHHHHHHHCCCEEEEHHCCCCCCEEEEEEEECCCCCHHHHHCCCCCCCEEEEECC
PKTALRLEN
CCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]