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The map label for this gene is ycbW [H]

Identifier: 29142288

GI number: 29142288

Start: 1923094

End: 1923639

Strand: Reverse

Name: ycbW [H]

Synonym: t1861

Alternate gene names: 29142288

Gene position: 1923639-1923094 (Counterclockwise)

Preceding gene: 29142289

Following gene: 29142286

Centisome position: 40.14

GC content: 51.83

Gene sequence:

>546_bases
GTGATGCGAATTAAACCTGACGATAACTGGCGCTGGTATTATGATGAAGAGCACGATCGTATGATGCTCGATCTCGCCAA
TGGTATGCTTTTTCGCTCGCGCTTCTCTCGTAAAATGCTTACGCCGGACGCGTTTTGCCCGACCGGTTTTTGTGTGGATG
ATGCCGCGCTCTATTTTTCCTTTGAAGAAAAATGCCGGGATTTCGAATTAACCAAAGAGCAACGCGCGGAGCTGGTATTG
AATGCGCTGGTGGCGATTCGCTATCTCAAACCGCAGATGCCGAAAAGCTGGCATTTTGTGGCGCATGGCGAAATGTGGAC
CCCGGGCACGGGTGATGCCGCAAGCGTCTGGTTAAGCGATACGGCGGAACAGGTTAATTTGCTGGTCGTTGAGCCGGGAG
AAAATGCCGCGTTGTGTCTGCTGGCACAGCCAGGCGTGGTGATAGCAGGCCGAACCATGCAGCTTGGCGATGCGATTAAA
ATTATGAACGACAGGCTGAAACCGCAGGTTCACTGTCACAGTTTCAGCCTTGAACAAGCGGTTTAA

Upstream 100 bases:

>100_bases
ACTGTTGCTTATTTAGACATTTTAGGCTTTTATTATTGGGGTAATAAACGAAGCGGCAAAAGGACAATGCTGTTACGAGT
TGCTTAAAAGCGGGAGAGAG

Downstream 100 bases:

>100_bases
TTTTCCAGTCGTAACGCGGTCTTAGGCACGCAGCTACAGCTCAGAATCGTACCATCGTCACCCATAGCCGATTTTTTCAG
CGGACTTACTTCGCCTTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MMRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFSRKMLTPDAFCPTGFCVDDAALYFSFEEKCRDFELTKEQRAELVL
NALVAIRYLKPQMPKSWHFVAHGEMWTPGTGDAASVWLSDTAEQVNLLVVEPGENAALCLLAQPGVVIAGRTMQLGDAIK
IMNDRLKPQVHCHSFSLEQAV

Sequences:

>Translated_181_residues
MMRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFSRKMLTPDAFCPTGFCVDDAALYFSFEEKCRDFELTKEQRAELVL
NALVAIRYLKPQMPKSWHFVAHGEMWTPGTGDAASVWLSDTAEQVNLLVVEPGENAALCLLAQPGVVIAGRTMQLGDAIK
IMNDRLKPQVHCHSFSLEQAV
>Mature_181_residues
MMRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFSRKMLTPDAFCPTGFCVDDAALYFSFEEKCRDFELTKEQRAELVL
NALVAIRYLKPQMPKSWHFVAHGEMWTPGTGDAASVWLSDTAEQVNLLVVEPGENAALCLLAQPGVVIAGRTMQLGDAIK
IMNDRLKPQVHCHSFSLEQAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081807, Length=180, Percent_Identity=90, Blast_Score=338, Evalue=1e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009809 [H]

Pfam domain/function: PF07126 DUF1379 [H]

EC number: NA

Molecular weight: Translated: 20716; Mature: 20716

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFSRKMLTPDAFCPTGFCVDDAALYFS
CCCCCCCCCEEEEEECCCCEEEEEHHCCHHHHHHHHHCCCCCCCCCCCCCEECCCEEEEE
FEEKCRDFELTKEQRAELVLNALVAIRYLKPQMPKSWHFVAHGEMWTPGTGDAASVWLSD
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEECCCCCCCEEEEECC
TAEQVNLLVVEPGENAALCLLAQPGVVIAGRTMQLGDAIKIMNDRLKPQVHCHSFSLEQA
CCCCEEEEEEECCCCCEEEEEECCCEEEECCEEECCCHHHHHHHCCCCEEEEEEECHHHC
V
C
>Mature Secondary Structure
MMRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFSRKMLTPDAFCPTGFCVDDAALYFS
CCCCCCCCCEEEEEECCCCEEEEEHHCCHHHHHHHHHCCCCCCCCCCCCCEECCCEEEEE
FEEKCRDFELTKEQRAELVLNALVAIRYLKPQMPKSWHFVAHGEMWTPGTGDAASVWLSD
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEECCCCCCCEEEEECC
TAEQVNLLVVEPGENAALCLLAQPGVVIAGRTMQLGDAIKIMNDRLKPQVHCHSFSLEQA
CCCCEEEEEEECCCCCEEEEEECCCEEEECCEEECCCHHHHHHHCCCCEEEEEEECHHHC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]