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The map label for this gene is csgF

Identifier: 29142212

GI number: 29142212

Start: 1841607

End: 1842023

Strand: Direct

Name: csgF

Synonym: t1780

Alternate gene names: 29142212

Gene position: 1841607-1842023 (Clockwise)

Preceding gene: 29142211

Following gene: 29142213

Centisome position: 38.43

GC content: 44.36

Gene sequence:

>417_bases
ATGCGTGTTAAACATGCAGTAGTGCTGCTCATGCTTTTTTCGCCATTAACCTGGGCTGGAAATATGACGTTCCAGTTCCG
TAATCCTAACTTTGGTGGAAACCCCAATAACGGTTCCTTTTTATTGAATAGCGCCCAGGCGCAAAATTCATATAAAGACC
CCGCTTATGATAACGATTTTGGTATCGAGACCCCCTCAGCGTTGGATAACTTTACGCAGGCTATTCAATCGCAAATTCTG
GGCGGCTTGTTGACCAATATTAATACCGGAAAACCAGGACGTATGGTGACCAATGATTTTATTATCGATATCGCTAATCG
CGACGGACAGCTCCAGCTCAACGTCACGGACAGAAAAACGGGAAGAACCTCGACCATCGAAGTGTCAGGTTTACAAACTC
AGTCAACCGATTTTTAA

Upstream 100 bases:

>100_bases
AGGAAGCATTAAATCGCCGACAAATAGATCAAACGCTATTAAGTACGAGTGATTTAGCGCGTGATGAATTCTAAAACATG
ATTTTTATCCGGAGGCTGTC

Downstream 100 bases:

>100_bases
GCTACAGTCACTAAAGGATATAAATCATGCCGCGCTTACTTATTTTGGTTGCCGTTTTATTGTTGAGCGGATGCTTAACT
GCCCCGCCGAAACAAGCTGC

Product: curli assembly protein CsgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MRVKHAVVLLMLFSPLTWAGNMTFQFRNPNFGGNPNNGSFLLNSAQAQNSYKDPAYDNDFGIETPSALDNFTQAIQSQIL
GGLLTNINTGKPGRMVTNDFIIDIANRDGQLQLNVTDRKTGRTSTIEVSGLQTQSTDF

Sequences:

>Translated_138_residues
MRVKHAVVLLMLFSPLTWAGNMTFQFRNPNFGGNPNNGSFLLNSAQAQNSYKDPAYDNDFGIETPSALDNFTQAIQSQIL
GGLLTNINTGKPGRMVTNDFIIDIANRDGQLQLNVTDRKTGRTSTIEVSGLQTQSTDF
>Mature_138_residues
MRVKHAVVLLMLFSPLTWAGNMTFQFRNPNFGGNPNNGSFLLNSAQAQNSYKDPAYDNDFGIETPSALDNFTQAIQSQIL
GGLLTNINTGKPGRMVTNDFIIDIANRDGQLQLNVTDRKTGRTSTIEVSGLQTQSTDF

Specific function: May be involved in the biogenesis of curli organelles

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787275, Length=138, Percent_Identity=89.8550724637681, Blast_Score=231, Evalue=1e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CSGF_SALTI (P0A203)

Other databases:

- EMBL:   AL627269
- EMBL:   AE014613
- RefSeq:   NP_455634.1
- RefSeq:   NP_805554.1
- GeneID:   1071420
- GeneID:   1247583
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AL513382_GR
- KEGG:   stt:t1780
- KEGG:   sty:STY1177
- HOGENOM:   HBG660516
- OMA:   PVNPNFG
- ProtClustDB:   PRK10050
- BioCyc:   SENT209261:T1780-MONOMER
- BioCyc:   SENT220341:STY1177-MONOMER
- InterPro:   IPR018893

Pfam domain/function: PF10614 Tafi-CsgF

EC number: NA

Molecular weight: Translated: 15159; Mature: 15159

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVKHAVVLLMLFSPLTWAGNMTFQFRNPNFGGNPNNGSFLLNSAQAQNSYKDPAYDNDF
CCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
GIETPSALDNFTQAIQSQILGGLLTNINTGKPGRMVTNDFIIDIANRDGQLQLNVTDRKT
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECEEEEEEECCCCEEEEEEECCCC
GRTSTIEVSGLQTQSTDF
CCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MRVKHAVVLLMLFSPLTWAGNMTFQFRNPNFGGNPNNGSFLLNSAQAQNSYKDPAYDNDF
CCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
GIETPSALDNFTQAIQSQILGGLLTNINTGKPGRMVTNDFIIDIANRDGQLQLNVTDRKT
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECEEEEEEECCCCEEEEEEECCCC
GRTSTIEVSGLQTQSTDF
CCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504