| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is csgG [H]
Identifier: 29142213
GI number: 29142213
Start: 1842050
End: 1842883
Strand: Direct
Name: csgG [H]
Synonym: t1781
Alternate gene names: 29142213
Gene position: 1842050-1842883 (Clockwise)
Preceding gene: 29142212
Following gene: 29142222
Centisome position: 38.44
GC content: 48.8
Gene sequence:
>834_bases ATGCCGCGCTTACTTATTTTGGTTGCCGTTTTATTGTTGAGCGGATGCTTAACTGCCCCGCCGAAACAAGCTGCGAAACC GACATTAATGCCCCGCGCACAAAGTTACAAAGATTTGACGCACTTACCTGCTCCCACCGGTAAGATCTTTGTTTCGGTAT ATAACATTCAGGATGAAACGGGCCAATTTAAACCTTACCCGGCAAGTAACTTTTCCACGGCTGTGCCGCAGAGCGCCACC GCTATGTTGGTCACCGCGCTGAAAGATTCGCGCTGGTTTATCCCACTAGAACGACAAGGCTTACAGAATCTTTTGAATGA ACGGAAAATTATTCGCGCAGCCCAGGAAAACGGCACCGTGGCGATGAATAACCGTATCCCGCTTCAGTCGTTGACGGCGG CAAATATTATGGTGGAAGGTTCTATTATTGGTTATGAAAGTAACGTCAAATCCGGCGGGGTCGGCGCAAGATATTTCGGT ATTGGCGCCGATACGCAGTATCAGCTGGATCAGATTGCTGTCAACCTGCGCGTGGTTAACGTCAGTACGGGCGAGATCCT TTCTTCGGTGAACACCAGTAAAACGATCCTTTCCTATGAAGTACAGGCAGGCGTGTTCCGTTTTATTGATTACCAGCGCT TACTGGAAGGCGAAATCGGCTATACCTCGAACGAACCGGTGATGCTGTGTCTGATGTCAGCCATTGAAACCGGCGTTATC TTCCTCATTAATGATGGTATCGATCGCGGACTGTGGGATTTGCAGAATAAAGCGGACAGGCAAAATGATATTCTGGTGAA ATACCGTGAGCTGTCAGTACCGCCAGAATCCTGA
Upstream 100 bases:
>100_bases TCACGGACAGAAAAACGGGAAGAACCTCGACCATCGAAGTGTCAGGTTTACAAACTCAGTCAACCGATTTTTAAGCTACA GTCACTAAAGGATATAAATC
Downstream 100 bases:
>100_bases TGAATACGACAAAGCGTGGGGAAAACCCCACGCTTTTTTATTTTGTGACCGCCGTATTCGCTGAATGTTGCTCGCGGCGT GATGCCAGCCATAGCCCACT
Product: assembly/transport component in curli production
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MPRLLILVAVLLLSGCLTAPPKQAAKPTLMPRAQSYKDLTHLPAPTGKIFVSVYNIQDETGQFKPYPASNFSTAVPQSAT AMLVTALKDSRWFIPLERQGLQNLLNERKIIRAAQENGTVAMNNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFG IGADTQYQLDQIAVNLRVVNVSTGEILSSVNTSKTILSYEVQAGVFRFIDYQRLLEGEIGYTSNEPVMLCLMSAIETGVI FLINDGIDRGLWDLQNKADRQNDILVKYRELSVPPES
Sequences:
>Translated_277_residues MPRLLILVAVLLLSGCLTAPPKQAAKPTLMPRAQSYKDLTHLPAPTGKIFVSVYNIQDETGQFKPYPASNFSTAVPQSAT AMLVTALKDSRWFIPLERQGLQNLLNERKIIRAAQENGTVAMNNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFG IGADTQYQLDQIAVNLRVVNVSTGEILSSVNTSKTILSYEVQAGVFRFIDYQRLLEGEIGYTSNEPVMLCLMSAIETGVI FLINDGIDRGLWDLQNKADRQNDILVKYRELSVPPES >Mature_276_residues PRLLILVAVLLLSGCLTAPPKQAAKPTLMPRAQSYKDLTHLPAPTGKIFVSVYNIQDETGQFKPYPASNFSTAVPQSATA MLVTALKDSRWFIPLERQGLQNLLNERKIIRAAQENGTVAMNNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFGI GADTQYQLDQIAVNLRVVNVSTGEILSSVNTSKTILSYEVQAGVFRFIDYQRLLEGEIGYTSNEPVMLCLMSAIETGVIF LINDGIDRGLWDLQNKADRQNDILVKYRELSVPPES
Specific function: May be involved in the biogenesis of curli organelles [H]
COG id: COG1462
COG function: function code M; Uncharacterized protein involved in formation of curli polymers
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CsgG family [H]
Homologues:
Organism=Escherichia coli, GI1787274, Length=277, Percent_Identity=96.028880866426, Blast_Score=552, Evalue=1e-158,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005534 [H]
Pfam domain/function: PF03783 CsgG [H]
EC number: NA
Molecular weight: Translated: 30437; Mature: 30306
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLLILVAVLLLSGCLTAPPKQAAKPTLMPRAQSYKDLTHLPAPTGKIFVSVYNIQDET CCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEEECCCC GQFKPYPASNFSTAVPQSATAMLVTALKDSRWFIPLERQGLQNLLNERKIIRAAQENGTV CCCCCCCCCCCCCCCCCCHHHHEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCE AMNNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFGIGADTQYQLDQIAVNLRVVN EECCCCCHHHHCEEEEEEECEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEEEE VSTGEILSSVNTSKTILSYEVQAGVFRFIDYQRLLEGEIGYTSNEPVMLCLMSAIETGVI ECHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCEE FLINDGIDRGLWDLQNKADRQNDILVKYRELSVPPES EEEECCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCC >Mature Secondary Structure PRLLILVAVLLLSGCLTAPPKQAAKPTLMPRAQSYKDLTHLPAPTGKIFVSVYNIQDET CHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEEECCCC GQFKPYPASNFSTAVPQSATAMLVTALKDSRWFIPLERQGLQNLLNERKIIRAAQENGTV CCCCCCCCCCCCCCCCCCHHHHEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCE AMNNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFGIGADTQYQLDQIAVNLRVVN EECCCCCHHHHCEEEEEEECEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEEEE VSTGEILSSVNTSKTILSYEVQAGVFRFIDYQRLLEGEIGYTSNEPVMLCLMSAIETGVI ECHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCEE FLINDGIDRGLWDLQNKADRQNDILVKYRELSVPPES EEEECCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA