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The map label for this gene is sgcQ [H]

Identifier: 29141968

GI number: 29141968

Start: 1580020

End: 1580826

Strand: Direct

Name: sgcQ [H]

Synonym: t1524

Alternate gene names: 29141968

Gene position: 1580020-1580826 (Clockwise)

Preceding gene: 29141967

Following gene: 29141969

Centisome position: 32.97

GC content: 53.16

Gene sequence:

>807_bases
ATGAGTTGGCTAAAAGAGGTAATAGGAACAGAAAAAGCCGTTATCGCCATGTGCCATTTACGGGCGCTGCCGGGCGATCC
CGGGTTCGATACCAGGAAAGGCATGAACTGGGTAATTGACCGCGCCCATGACGATTTAATGGCGCTACAAAATGGCGGCG
TGGATGCGGTGATGTTCTCCAACGAATTTAGTCTGCCTTATTTAACGAAAGTCAGACCGGAAACGACTGCCGCGATGGCA
CGAATCATCGGTCAGTTAATGAGTGAAATTCGCGTACCGTTTGGGGTAAACGTGTTGTGGGACCCTGTGGCCTCTTTTGA
TTTGGCGATGGCGACCGACGCAAAATTTATTCGCGAAATTTTCACCGGTGCTTACGCCAGCGATTTTGGCGTCTGGGATA
CGAATGTCGGCGAAACTATTCGCCATCAGCATCGCATCGGCGCAGGCCACGTGAAAACGCTGTTTAACATCGTGCCGGAA
GCGGCGGTGTATCTGGGAAACCGAGATGTCTGTTCAATTGCGAAATCGACCGTATTTAACAATAACCCCGATGCCCTGTG
CGTCTCGGGGCTGACGGCGGGCGCCCGCACGGATAGCGCCATACTGAAGCGGGTAAAAGATACCGTTCCCGACACGGTCG
TGCTGGCGAATACCGGGGTGTGTCTGGAAAACGTCGAGGAGCAGCTCTGCATTGCCGACGGATGCGTAACGGCAACCACG
TTTAAAAAAGACGGCGTCTTCGCCAACTTTGTCGACCAGGCGCGCGTGGCGAAGTTTATGGAGAAAGTACGCCATATCCG
ACAATAA

Upstream 100 bases:

>100_bases
TCGCTGGGCATGATTGGTGTGGTTATTGTGGTCGGCATTGTCGCCAGCATCATACTTGTCTTACGTAAACGTGAACTACC
GGAATAAGGAGCAACCCAGA

Downstream 100 bases:

>100_bases
AATGGGGATAAGCAAAACGCTTATCCCCTGCAGAGAGCGATAACTCTTCTGCCGATCTCCGTCGCCTTCGCCAAAAGACA
CGCCGGGGATCGGTTTCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MSWLKEVIGTEKAVIAMCHLRALPGDPGFDTRKGMNWVIDRAHDDLMALQNGGVDAVMFSNEFSLPYLTKVRPETTAAMA
RIIGQLMSEIRVPFGVNVLWDPVASFDLAMATDAKFIREIFTGAYASDFGVWDTNVGETIRHQHRIGAGHVKTLFNIVPE
AAVYLGNRDVCSIAKSTVFNNNPDALCVSGLTAGARTDSAILKRVKDTVPDTVVLANTGVCLENVEEQLCIADGCVTATT
FKKDGVFANFVDQARVAKFMEKVRHIRQ

Sequences:

>Translated_268_residues
MSWLKEVIGTEKAVIAMCHLRALPGDPGFDTRKGMNWVIDRAHDDLMALQNGGVDAVMFSNEFSLPYLTKVRPETTAAMA
RIIGQLMSEIRVPFGVNVLWDPVASFDLAMATDAKFIREIFTGAYASDFGVWDTNVGETIRHQHRIGAGHVKTLFNIVPE
AAVYLGNRDVCSIAKSTVFNNNPDALCVSGLTAGARTDSAILKRVKDTVPDTVVLANTGVCLENVEEQLCIADGCVTATT
FKKDGVFANFVDQARVAKFMEKVRHIRQ
>Mature_267_residues
SWLKEVIGTEKAVIAMCHLRALPGDPGFDTRKGMNWVIDRAHDDLMALQNGGVDAVMFSNEFSLPYLTKVRPETTAAMAR
IIGQLMSEIRVPFGVNVLWDPVASFDLAMATDAKFIREIFTGAYASDFGVWDTNVGETIRHQHRIGAGHVKTLFNIVPEA
AVYLGNRDVCSIAKSTVFNNNPDALCVSGLTAGARTDSAILKRVKDTVPDTVVLANTGVCLENVEEQLCIADGCVTATTF
KKDGVFANFVDQARVAKFMEKVRHIRQ

Specific function: Unknown

COG id: COG0434

COG function: function code R; Predicted TIM-barrel enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BtpA family [H]

Homologues:

Organism=Escherichia coli, GI1790757, Length=268, Percent_Identity=92.5373134328358, Blast_Score=517, Evalue=1e-148,
Organism=Caenorhabditis elegans, GI115532828, Length=265, Percent_Identity=24.9056603773585, Blast_Score=64, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24659916, Length=266, Percent_Identity=24.812030075188, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005137
- InterPro:   IPR011060
- ProDom:   PD011184 [H]

Pfam domain/function: PF03437 BtpA [H]

EC number: NA

Molecular weight: Translated: 29353; Mature: 29222

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWLKEVIGTEKAVIAMCHLRALPGDPGFDTRKGMNWVIDRAHDDLMALQNGGVDAVMFS
CCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
NEFSLPYLTKVRPETTAAMARIIGQLMSEIRVPFGVNVLWDPVASFDLAMATDAKFIREI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHH
FTGAYASDFGVWDTNVGETIRHQHRIGAGHVKTLFNIVPEAAVYLGNRDVCSIAKSTVFN
HHCCHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
NNPDALCVSGLTAGARTDSAILKRVKDTVPDTVVLANTGVCLENVEEQLCIADGCVTATT
CCCCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEE
FKKDGVFANFVDQARVAKFMEKVRHIRQ
ECCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SWLKEVIGTEKAVIAMCHLRALPGDPGFDTRKGMNWVIDRAHDDLMALQNGGVDAVMFS
CHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
NEFSLPYLTKVRPETTAAMARIIGQLMSEIRVPFGVNVLWDPVASFDLAMATDAKFIREI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHH
FTGAYASDFGVWDTNVGETIRHQHRIGAGHVKTLFNIVPEAAVYLGNRDVCSIAKSTVFN
HHCCHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
NNPDALCVSGLTAGARTDSAILKRVKDTVPDTVVLANTGVCLENVEEQLCIADGCVTATT
CCCCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEE
FKKDGVFANFVDQARVAKFMEKVRHIRQ
ECCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]