Click here to switch to the map view.

The map label for this gene is sgcC [H]

Identifier: 29141967

GI number: 29141967

Start: 1578693

End: 1580006

Strand: Direct

Name: sgcC [H]

Synonym: t1523

Alternate gene names: 29141967

Gene position: 1578693-1580006 (Clockwise)

Preceding gene: 29141966

Following gene: 29141968

Centisome position: 32.94

GC content: 52.21

Gene sequence:

>1314_bases
ATGTTTGATTACATCCTGTCTCTCGGCGGCACCGTCTTTGTGCCCATCATTATGATTATCATCGGCTTAATCTTTCGTAT
TCCCTGGCTGCAGGCGGTGAAAGCGGGGGTGACGGTCGGCATCGGTTTTGTCGGCATGGGGCTGGTGATCGTCATGGCGA
TCGACAGTCTCAGTCCGCCGATTAAAGTGATGATTGAGCGTTTTGGCCTGACGCTGCATGTGTTTGACGTCGGCGCCGGG
CCCGCATCCGGCGTCGGCTATGCGACGGCCATCGGCGCGATGATCATTCCCGTTATCTTTCTGCTCAACGTCGGTATGCT
GGTGACTCGTCTGACCAAAACCATGAACGTTGATATTTATAACTACTGGCACTACGCCATTACCGGAACGGTCGTCCAGT
TGATGACCGGCAGTCTGATTTATGGCGTACTGGGCGCGATTTGCCATGCCGCCTTGTCGTTGAAAATGGCCGACTGGACG
ACGAAACGGGTACAGAACATTGTGGGTCTGGAAGGGATTTCTATTCCGCAAGGGTATGGCTCCAGCTCCGTGCCGTTGTT
CGTATTGCTGGATGCGATATACGAAAAAATACCGTTTATGAAAGGACGCAATATTGACGCTCAGGAGATCCAAAAACGGT
ATGGGATGGTCGGCGACCCGGTGATCATTGGCGTTGTTCTCGGGCTGATCTTCGGACTTGCTGCAGGCGAAGGCTTTAAA
GGGTGCGCAACCTTAATGATTACCGTGGCGGCGATTATGGTGCTGTTTCCGCGCATGATTCGCCTTATCGTTGAGGGATT
AATGCCCATTTCCGACGGCGCGCGTAAGTTCTTCCAGAAACACTTTAAAGGGCGCGAAGTCTTTATCGGTCTGGATACCG
CAGTGACGTTAGGCCACCCGACCACCATCGCGGTTGGACTGCTGTTAATTCCCATCATGTTAATTCTGGCGAGCATACTG
CCGGGCAATAAAGTCCTGCCGCTGGCTGATTTACCGGTCGCGCCATTTTTTATCTGCATGGCCACAGTTATTCATCGCGG
CGATCTGATTCGTACTCTGCTCAGCGGCATCATTGTCATGATTACCGTTTTGCTGATCGCCACCCAGTTCGCGCCGTACT
TTACCGATATGGCGCTCAAAGGCGGCTTTAGCTTCGCCGCTGAAAACGCGCAAATTACCGCGCTGTCGGTGGGAAATATG
TTTGGCTGGTCAATATCTGAATTGATGTCGCTGGGCATGATTGGTGTGGTTATTGTGGTCGGCATTGTCGCCAGCATCAT
ACTTGTCTTACGTAAACGTGAACTACCGGAATAA

Upstream 100 bases:

>100_bases
GGCATCCCGACGCTCAACGGCGCCGCCCTGCTGACAGGCATCAACGACGACGCATTAAAACAAGAAATCAAGGCGCTGTT
AACACAATAAAGGGGGCATT

Downstream 100 bases:

>100_bases
GGAGCAACCCAGAATGAGTTGGCTAAAAGAGGTAATAGGAACAGAAAAAGCCGTTATCGCCATGTGCCATTTACGGGCGC
TGCCGGGCGATCCCGGGTTC

Product: phosphotransferase protein

Products: protein histidine; sugar phosphate

Alternate protein names: Putative PTS system EIIC component [H]

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MFDYILSLGGTVFVPIIMIIIGLIFRIPWLQAVKAGVTVGIGFVGMGLVIVMAIDSLSPPIKVMIERFGLTLHVFDVGAG
PASGVGYATAIGAMIIPVIFLLNVGMLVTRLTKTMNVDIYNYWHYAITGTVVQLMTGSLIYGVLGAICHAALSLKMADWT
TKRVQNIVGLEGISIPQGYGSSSVPLFVLLDAIYEKIPFMKGRNIDAQEIQKRYGMVGDPVIIGVVLGLIFGLAAGEGFK
GCATLMITVAAIMVLFPRMIRLIVEGLMPISDGARKFFQKHFKGREVFIGLDTAVTLGHPTTIAVGLLLIPIMLILASIL
PGNKVLPLADLPVAPFFICMATVIHRGDLIRTLLSGIIVMITVLLIATQFAPYFTDMALKGGFSFAAENAQITALSVGNM
FGWSISELMSLGMIGVVIVVGIVASIILVLRKRELPE

Sequences:

>Translated_437_residues
MFDYILSLGGTVFVPIIMIIIGLIFRIPWLQAVKAGVTVGIGFVGMGLVIVMAIDSLSPPIKVMIERFGLTLHVFDVGAG
PASGVGYATAIGAMIIPVIFLLNVGMLVTRLTKTMNVDIYNYWHYAITGTVVQLMTGSLIYGVLGAICHAALSLKMADWT
TKRVQNIVGLEGISIPQGYGSSSVPLFVLLDAIYEKIPFMKGRNIDAQEIQKRYGMVGDPVIIGVVLGLIFGLAAGEGFK
GCATLMITVAAIMVLFPRMIRLIVEGLMPISDGARKFFQKHFKGREVFIGLDTAVTLGHPTTIAVGLLLIPIMLILASIL
PGNKVLPLADLPVAPFFICMATVIHRGDLIRTLLSGIIVMITVLLIATQFAPYFTDMALKGGFSFAAENAQITALSVGNM
FGWSISELMSLGMIGVVIVVGIVASIILVLRKRELPE
>Mature_437_residues
MFDYILSLGGTVFVPIIMIIIGLIFRIPWLQAVKAGVTVGIGFVGMGLVIVMAIDSLSPPIKVMIERFGLTLHVFDVGAG
PASGVGYATAIGAMIIPVIFLLNVGMLVTRLTKTMNVDIYNYWHYAITGTVVQLMTGSLIYGVLGAICHAALSLKMADWT
TKRVQNIVGLEGISIPQGYGSSSVPLFVLLDAIYEKIPFMKGRNIDAQEIQKRYGMVGDPVIIGVVLGLIFGLAAGEGFK
GCATLMITVAAIMVLFPRMIRLIVEGLMPISDGARKFFQKHFKGREVFIGLDTAVTLGHPTTIAVGLLLIPIMLILASIL
PGNKVLPLADLPVAPFFICMATVIHRGDLIRTLLSGIIVMITVLLIATQFAPYFTDMALKGGFSFAAENAQITALSVGNM
FGWSISELMSLGMIGVVIVVGIVASIILVLRKRELPE

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane [H]

COG id: COG3775

COG function: function code G; Phosphotransferase system, galactitol-specific IIC component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1790758, Length=437, Percent_Identity=94.7368421052632, Blast_Score=781, Evalue=0.0,
Organism=Escherichia coli, GI1788408, Length=379, Percent_Identity=44.8548812664908, Blast_Score=323, Evalue=1e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013853
- InterPro:   IPR013014
- InterPro:   IPR004703 [H]

Pfam domain/function: PF03611 EIIC-GAT [H]

EC number: 2.7.1.69

Molecular weight: Translated: 46841; Mature: 46841

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS51104 PTS_EIIC_TYPE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: protein N(pi)-phosphohistidine; sugar

Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]