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The map label for this gene is sscA

Identifier: 29141728

GI number: 29141728

Start: 1338927

End: 1339400

Strand: Direct

Name: sscA

Synonym: t1267

Alternate gene names: NA

Gene position: 1338927-1339400 (Clockwise)

Preceding gene: 29141727

Following gene: 29141729

Centisome position: 27.94

GC content: 50.0

Gene sequence:

>474_bases
ATGAAAAAAGACCCGACCCTACAACAGGCACATGACACGATGCGATTTTTCCGGCGTGGCGGCTCGCTGCGTATGTTGTT
GGATGACGATGTTACACAGCCGCTTAATACTGTGTATCGCTATGCCATGCAGCTTATGGAGGTAAAAGAATTCGCCGGCG
CAGCGCGACTTTTTCAATTGCTGACGATATATGATGCCTGGTCATTTGACTACTGGTTTCGGTTAGGGGAATGCTGCCAG
GCTCAAAAACATTGGGGGGAAGCGATATACGCTTATGGACGCGCGGCACAAATTAAGATTGATGCGCCGCAGGCGCCATG
GGCCGCAGCGGAATGCTATCTCGCGTGTGATAACGTCTGTTATGCAATAAAAGCGTTAAAAGCCGTGGTGCGTATTTGCG
GCGAGGTCAGTGAACATCAAATCCTCCGACTACGTGCAGAAAAGATGTTACAGCAGCTTTCTGACAGGAGCTAA

Upstream 100 bases:

>100_bases
AAAAAATGTCTCAGGAGCTTAACGCTGTCCTTACCCAACTGACGGGGCTTATCAGTAAGTGGGGGGAAATTTCCAGTATG
ATAGCGCAGAAAACGTATTC

Downstream 100 bases:

>100_bases
AAATGAATCGAATTCACAGTAATAGCGATAGCGCCGCAGGAGTAACCGCCTTAACACATCATCACTTAAGCAATGTCAGT
TGCGTTTCCTCGGGTTCGCT

Product: type III secretion system chaperone protein

Products: NA

Alternate protein names: Type III Secretion Low Calcium Response Chaperone; Type III Secretion Chaperone; Type III Secretion System CesD Protein; Type III Secretion System Chaperone SycD Family

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MKKDPTLQQAHDTMRFFRRGGSLRMLLDDDVTQPLNTVYRYAMQLMEVKEFAGAARLFQLLTIYDAWSFDYWFRLGECCQ
AQKHWGEAIYAYGRAAQIKIDAPQAPWAAAECYLACDNVCYAIKALKAVVRICGEVSEHQILRLRAEKMLQQLSDRS

Sequences:

>Translated_157_residues
MKKDPTLQQAHDTMRFFRRGGSLRMLLDDDVTQPLNTVYRYAMQLMEVKEFAGAARLFQLLTIYDAWSFDYWFRLGECCQ
AQKHWGEAIYAYGRAAQIKIDAPQAPWAAAECYLACDNVCYAIKALKAVVRICGEVSEHQILRLRAEKMLQQLSDRS
>Mature_157_residues
MKKDPTLQQAHDTMRFFRRGGSLRMLLDDDVTQPLNTVYRYAMQLMEVKEFAGAARLFQLLTIYDAWSFDYWFRLGECCQ
AQKHWGEAIYAYGRAAQIKIDAPQAPWAAAECYLACDNVCYAIKALKAVVRICGEVSEHQILRLRAEKMLQQLSDRS

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18136; Mature: 18136

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKDPTLQQAHDTMRFFRRGGSLRMLLDDDVTQPLNTVYRYAMQLMEVKEFAGAARLFQL
CCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTIYDAWSFDYWFRLGECCQAQKHWGEAIYAYGRAAQIKIDAPQAPWAAAECYLACDNVC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHH
YAIKALKAVVRICGEVSEHQILRLRAEKMLQQLSDRS
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKDPTLQQAHDTMRFFRRGGSLRMLLDDDVTQPLNTVYRYAMQLMEVKEFAGAARLFQL
CCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTIYDAWSFDYWFRLGECCQAQKHWGEAIYAYGRAAQIKIDAPQAPWAAAECYLACDNVC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHH
YAIKALKAVVRICGEVSEHQILRLRAEKMLQQLSDRS
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA