Click here to switch to the map view.

The map label for this gene is spy [H]

Identifier: 29141652

GI number: 29141652

Start: 1256434

End: 1256919

Strand: Direct

Name: spy [H]

Synonym: t1187

Alternate gene names: 29141652

Gene position: 1256434-1256919 (Clockwise)

Preceding gene: 29141651

Following gene: 29141655

Centisome position: 26.22

GC content: 49.38

Gene sequence:

>486_bases
ATGCGTAAACTGACTGCTCTATTTGTTGCCTCTACCCTGGCGATGGGTGCTGCGAATCTGGCTCATGCCGCTGAGACTAC
CACCGCCGCGCCAGCGGATGCGAAGCCAATGATGCAGCATAAAGGTAAATTTGGCCCACATCACGATATGATGTTTAAAA
ACCTGAACCTGACAGACGCGCAGAAGCAACAAATTCGCGACATTATAAAAGCGCAGCGCGAGCAAATGGAACGTCCGCTG
CTGGAAGAGCGTCGCGCCATGCATGATATTATTGCCAGCGATACCTTCGATAAAGCCAAAGCCGAAGCGCAAATTACGAA
AATGGAAGCACAGCGCAAGGCCAATATGCTGGCGCATATGGAAACCCAGAATAAAATTTATAACGTTCTGACGCCGGAGC
AGAAAAAGCAATATAACGCTAATTTTGAGAAGCGTCTGACAGAACGCCCGGCGCAAGAAGGTAAAATGCCTGCTGCGGCA
GAATAA

Upstream 100 bases:

>100_bases
TTGTTCTGACTAATTGACGCTAAGACGGTTAAAGTTAATCACGACAACACGGCGCTGTTTTAAATATGCCGTAAAAATAA
CTGAAAGGAAGGATGGAAAT

Downstream 100 bases:

>100_bases
CTTTCCGCATAATTTAAGACCGCCGGTCTTGTCGACAACACAATCGTTGAGGTGGACAGGATCGGCGGTTTTCTTTATGA
CTGGCGACAGTCGGTGTGCA

Product: periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MRKLTALFVASTLAMGAANLAHAAETTTAAPADAKPMMQHKGKFGPHHDMMFKNLNLTDAQKQQIRDIIKAQREQMERPL
LEERRAMHDIIASDTFDKAKAEAQITKMEAQRKANMLAHMETQNKIYNVLTPEQKKQYNANFEKRLTERPAQEGKMPAAA
E

Sequences:

>Translated_161_residues
MRKLTALFVASTLAMGAANLAHAAETTTAAPADAKPMMQHKGKFGPHHDMMFKNLNLTDAQKQQIRDIIKAQREQMERPL
LEERRAMHDIIASDTFDKAKAEAQITKMEAQRKANMLAHMETQNKIYNVLTPEQKKQYNANFEKRLTERPAQEGKMPAAA
E
>Mature_161_residues
MRKLTALFVASTLAMGAANLAHAAETTTAAPADAKPMMQHKGKFGPHHDMMFKNLNLTDAQKQQIRDIIKAQREQMERPL
LEERRAMHDIIASDTFDKAKAEAQITKMEAQRKANMLAHMETQNKIYNVLTPEQKKQYNANFEKRLTERPAQEGKMPAAA
E

Specific function: Could be involved in zinc resistance or another aspect of zinc metabolism [H]

COG id: COG3678

COG function: function code UNTP; P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli CpxP [H]

Homologues:

Organism=Escherichia coli, GI1788039, Length=161, Percent_Identity=88.1987577639752, Blast_Score=263, Evalue=3e-72,
Organism=Escherichia coli, GI48994991, Length=146, Percent_Identity=30.8219178082192, Blast_Score=67, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012899 [H]

Pfam domain/function: PF07813 LTXXQ [H]

EC number: NA

Molecular weight: Translated: 18217; Mature: 18217

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.5 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLTALFVASTLAMGAANLAHAAETTTAAPADAKPMMQHKGKFGPHHDMMFKNLNLTDA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHCCCCCHH
QKQQIRDIIKAQREQMERPLLEERRAMHDIIASDTFDKAKAEAQITKMEAQRKANMLAHM
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ETQNKIYNVLTPEQKKQYNANFEKRLTERPAQEGKMPAAAE
HHHHHHHHCCCCHHHHHHCCCHHHHHHHCCHHHCCCCCCCC
>Mature Secondary Structure
MRKLTALFVASTLAMGAANLAHAAETTTAAPADAKPMMQHKGKFGPHHDMMFKNLNLTDA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHCCCCCHH
QKQQIRDIIKAQREQMERPLLEERRAMHDIIASDTFDKAKAEAQITKMEAQRKANMLAHM
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ETQNKIYNVLTPEQKKQYNANFEKRLTERPAQEGKMPAAAE
HHHHHHHHCCCCHHHHHHCCCHHHHHHHCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9068658; 9097039; 9278503; 9694902 [H]