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The map label for this gene is selD [H]

Identifier: 29141642

GI number: 29141642

Start: 1243487

End: 1244530

Strand: Direct

Name: selD [H]

Synonym: t1176

Alternate gene names: 29141642

Gene position: 1243487-1244530 (Clockwise)

Preceding gene: 29141641

Following gene: 29141643

Centisome position: 25.95

GC content: 56.8

Gene sequence:

>1044_bases
ATGAGCAAGCAAGCCATTCGTTTAACGCAATACAGCCACGGCGCTGGTTGCGGTTGTAAAATTTCCCCTAAAGTGCTGGA
GACTATCCTGCATAGCGAGCAGGCGAAGTTCGTCGACCCGAATCTGCTGGTGGGTAATGAAACCCGCGATGATGCGGCAG
TTTACGATCTGGGTAATGGCACCAGTATTATCAGCACCACTGACTTCTTTATGCCGATAGTCGACAACCCGTTTGATTTT
GGCCGCATTGCGGCAACAAACGCCATCAGCGATATTTTTGCGATGGGCGGCAAACCGATTATGGCGATCGCGATCCTTGG
CTGGCCGATTAATACCCTGTCGCCCGATATTGCGCGTGAAGTGACCGAGGGGGGGCGTTTTGCCTGCCGTCAGGCCGGTA
TCGCGCTGGCGGGCGGACACTCTATTGACGCCCCGGAGCCGATCTTTGGTCTCGCGGTCACAGGCGTAGTGCCGACCGAA
CGGGTGAAGAAAAACAGTACCGCGCAGGCGGGATGCAAACTCTTTCTGACCAAACCGTTGGGGATTGGCGTGTTGACCAC
CGCCGAGAAAAAATCGCTGCTTAAACCTGAACATCAGGGGCTGGCGACGGAAGTCATGTGTCGGATGAACGTTGCTGGCG
CGGCGTTTGCCAATATCGACGGCGTAAAAGCCATGACTGACGTTACCGGTTTTGGTCTGCTGGGACACCTGAGCGAGATG
TGCCAGGGTGCAGGCGTACAGGCGATGCTTTGCTATCAGGACATCCCTAAACTGCCGGGCGTGGAAGAGTATATTGCTCT
GGGCGCCGTACCGGGCGGCACAGAGCGCAACTTCGCCAGCTATGGTCATCTGATGGGCGACATGTCGCGTGAAGTTCGTA
GCCTGCTGTGCGATCCGCAAACGTCAGGCGGTCTGCTGTTGGCGGTAACGCCGGACGCCGAAGACGATGTTAAAGCCACC
GCGGCGGAATTTGGTATCGAACTGACCGCGATTGGCGAACTGGTCGAGGCCCGCGGCGGTCGCGCTATGGTTGAGATTCG
TTAA

Upstream 100 bases:

>100_bases
GTCTGGATTCTGAGCAAAGGCGCGGTAATTCAGACAGTGATACTTACCACATCAGGGAATGAGCGCTACCATAGCGCGAA
TGCAATGACAGGAGATGTCC

Downstream 100 bases:

>100_bases
CCTGATGCGGTTGTTTATTGCCGAAAAACCGAGTCTGGGGCGCGCCATTGCGGATGTGCTGCCAAAACCGCACCGTAAAG
GCGATGGTTTTATTGAGTGC

Product: selenophosphate synthetase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MSKQAIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLVGNETRDDAAVYDLGNGTSIISTTDFFMPIVDNPFDF
GRIAATNAISDIFAMGGKPIMAIAILGWPINTLSPDIAREVTEGGRFACRQAGIALAGGHSIDAPEPIFGLAVTGVVPTE
RVKKNSTAQAGCKLFLTKPLGIGVLTTAEKKSLLKPEHQGLATEVMCRMNVAGAAFANIDGVKAMTDVTGFGLLGHLSEM
CQGAGVQAMLCYQDIPKLPGVEEYIALGAVPGGTERNFASYGHLMGDMSREVRSLLCDPQTSGGLLLAVTPDAEDDVKAT
AAEFGIELTAIGELVEARGGRAMVEIR

Sequences:

>Translated_347_residues
MSKQAIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLVGNETRDDAAVYDLGNGTSIISTTDFFMPIVDNPFDF
GRIAATNAISDIFAMGGKPIMAIAILGWPINTLSPDIAREVTEGGRFACRQAGIALAGGHSIDAPEPIFGLAVTGVVPTE
RVKKNSTAQAGCKLFLTKPLGIGVLTTAEKKSLLKPEHQGLATEVMCRMNVAGAAFANIDGVKAMTDVTGFGLLGHLSEM
CQGAGVQAMLCYQDIPKLPGVEEYIALGAVPGGTERNFASYGHLMGDMSREVRSLLCDPQTSGGLLLAVTPDAEDDVKAT
AAEFGIELTAIGELVEARGGRAMVEIR
>Mature_346_residues
SKQAIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLVGNETRDDAAVYDLGNGTSIISTTDFFMPIVDNPFDFG
RIAATNAISDIFAMGGKPIMAIAILGWPINTLSPDIAREVTEGGRFACRQAGIALAGGHSIDAPEPIFGLAVTGVVPTER
VKKNSTAQAGCKLFLTKPLGIGVLTTAEKKSLLKPEHQGLATEVMCRMNVAGAAFANIDGVKAMTDVTGFGLLGHLSEMC
QGAGVQAMLCYQDIPKLPGVEEYIALGAVPGGTERNFASYGHLMGDMSREVRSLLCDPQTSGGLLLAVTPDAEDDVKATA
AEFGIELTAIGELVEARGGRAMVEIR

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=338, Percent_Identity=29.8816568047337, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI15011844, Length=300, Percent_Identity=29, Blast_Score=92, Evalue=5e-19,
Organism=Escherichia coli, GI1788062, Length=347, Percent_Identity=92.7953890489914, Blast_Score=665, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17543426, Length=344, Percent_Identity=30.5232558139535, Blast_Score=108, Evalue=4e-24,
Organism=Drosophila melanogaster, GI24653602, Length=264, Percent_Identity=30.3030303030303, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24653604, Length=264, Percent_Identity=30.3030303030303, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI28574119, Length=337, Percent_Identity=28.7833827893175, Blast_Score=92, Evalue=8e-19,
Organism=Drosophila melanogaster, GI28574118, Length=300, Percent_Identity=28.6666666666667, Blast_Score=82, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 36469; Mature: 36338

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKQAIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLVGNETRDDAAVYDLGNG
CCCCEEEEEECCCCCCCCCEECHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEECCCC
TSIISTTDFFMPIVDNPFDFGRIAATNAISDIFAMGGKPIMAIAILGWPINTLSPDIARE
CEEEEECCEEHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHCCHHHHHH
VTEGGRFACRQAGIALAGGHSIDAPEPIFGLAVTGVVPTERVKKNSTAQAGCKLFLTKPL
HHCCCCHHHHHCCEEEECCCCCCCCCCCEEEEEECCCCHHHHHCCCCHHCCEEEEEECCC
GIGVLTTAEKKSLLKPEHQGLATEVMCRMNVAGAAFANIDGVKAMTDVTGFGLLGHLSEM
CCEEEECHHHHHHCCCHHCCHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
CQGAGVQAMLCYQDIPKLPGVEEYIALGAVPGGTERNFASYGHLMGDMSREVRSLLCDPQ
HCCCCCEEEEEHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
TSGGLLLAVTPDAEDDVKATAAEFGIELTAIGELVEARGGRAMVEIR
CCCCEEEEECCCCCCHHHHHHHHHCEEHHHHHHHHHCCCCEEEEEEC
>Mature Secondary Structure 
SKQAIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLVGNETRDDAAVYDLGNG
CCCEEEEEECCCCCCCCCEECHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEECCCC
TSIISTTDFFMPIVDNPFDFGRIAATNAISDIFAMGGKPIMAIAILGWPINTLSPDIARE
CEEEEECCEEHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHCCHHHHHH
VTEGGRFACRQAGIALAGGHSIDAPEPIFGLAVTGVVPTERVKKNSTAQAGCKLFLTKPL
HHCCCCHHHHHCCEEEECCCCCCCCCCCEEEEEECCCCHHHHHCCCCHHCCEEEEEECCC
GIGVLTTAEKKSLLKPEHQGLATEVMCRMNVAGAAFANIDGVKAMTDVTGFGLLGHLSEM
CCEEEECHHHHHHCCCHHCCHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
CQGAGVQAMLCYQDIPKLPGVEEYIALGAVPGGTERNFASYGHLMGDMSREVRSLLCDPQ
HCCCCCEEEEEHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
TSGGLLLAVTPDAEDDVKATAAEFGIELTAIGELVEARGGRAMVEIR
CCCCEEEEECCCCCCHHHHHHHHHCEEHHHHHHHHHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA