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The map label for this gene is xp55 [H]

Identifier: 29141603

GI number: 29141603

Start: 1206290

End: 1207924

Strand: Direct

Name: xp55 [H]

Synonym: t1133

Alternate gene names: 29141603

Gene position: 1206290-1207924 (Clockwise)

Preceding gene: 29141600

Following gene: 29141604

Centisome position: 25.17

GC content: 54.07

Gene sequence:

>1635_bases
ATGCTGCGCCGGGAGAAACAAAAACAACGCATAATCTGGGACAAATTGATGATTAAAGGCAAACTGGCGCTCGTGACGTG
CGCGCTGACTCTGGTATTCACTTCGTCGCTTTTCGCCGCGTCGGACACGGCAGATGGTCGTACCCTGAAGCTGGCCATTG
GCCCTGAGCCAACGGAAGGCTTTGATCCCATGCTGGGCTGGAGCCACGGCAGCTACTTATTGCTTCATGCGCCGTTGCTT
AAGCAAAACGCCGATATGAGTTGGGGTGATTTACTGACGGAAAAAGTGGATACCAGCCCCGACGGTAAAATCTGGACGCT
AACCTTAAAGCCCGGGCTGAAATTCTCCGATGGCTCGCCATTAACTGCCGAAGATGTCGTTTTTACATACAATAAAGCGG
CGAAGAGCGGCGGTAAAATTGACATGGGCAATTTTAGCCATGCGCGAGCGCTGGATGCGCGCCGAATTGAGATGACGCTG
AGCCATCCGCAGAGCACCTTTGTGAATGTACTCGGGTCGTTAGGGATTGTTCCGGCCAGCCGTTATGATGAAAAAACGTT
CGCCCGCGAACCGATAGGCGCCGGTCCATACCGACTGGTCAGCTTTCAGCCGGGTCAGCAACTGATCGTTGAAGCTAATC
CCTGGTATGCGGGTAAAAAGAATGACTTTAACCGGCTGGTTTTTGTCTTTCTGGATGAAGATAATGCTTATGCCGCCGCG
CGCAGCGGACAGTTGGGACTGGTGCGCATTGCCCCTTCTATGGCGGTGACCCCGCAGCAGGATAATCTTAAACTCTGGGT
ACGCGATAGCGTTGAAAACCGGGGCATTGTCTTCCCGATGGTGCCTGCCGGTAAAAAGGATGCTAACGGTTATCCTGTCG
GCAACGATGTGACCGCTGATGTCGCTATCAGACGCGCAATTAACTATGCCATTAATCGTAAGCAACTGGCGGAACAGGTG
ATGGAAGGCCATGCGATACCCGCCTATAGCGCGGTGCAGGGATTACCGTGGCAAAATCCTTCAGTGGTATTCAGCGATGG
CGATATTGCAAAAGCGCGCGCCATCCTGGAAGAGGCTGGCTGGAAGATAAACAGTGCGGGCGTGCGTGAAAAAGCAGGTA
AAGAAGCGCGTCTGACCTTATGGTATGCCAGTGGCGACAGCACCCGACGGGATCTGGCCGAGGCGGTGCGCGCCATGTTG
CAGCGTTTAGGCATTGTCGTCTCGTTGCAATCGGGAAGCTGGGAAACTGTAGAGCGCCATATGCACGCTAACCCTACGCT
GTTTGGCTGGGGAAGTCTGGACCCGATGGAACTCTTCCATCACTACAGTGGGAAAGCCGCTGGTGTGGAATATTATAACC
CGGGCTATTACAGCAACCCTGCGGTAGAAGCACATCTGAAGCAGGCTATAGATGCGCCTGACTGGCAAAAGGCGATCCCT
TTCTGGCAGCAGGTTGAGTGGGATGGGAAGCAGGGCGCGGGCGTCCAGGGCGATGCGGCATGGGCATGGCTGCTTAATAT
TCAGCATACTTATCTGGCCAACCCCTGTATTGATCTGGGAAAAGGCTCGCCAGAAATCCACGGTAGCTGGTCGGTGTTAA
ACAATCTTGATGACTGGACCTGGACCTGTCGGTGA

Upstream 100 bases:

>100_bases
TATGATGTTTTTAAAAGATCGTCATACTTTCTGTTCTGCATCAATTTTTTCATTACAAATGCTCGCCATAATGCCGTCCT
CAGGAGGTCTCCCGACGTTT

Downstream 100 bases:

>100_bases
TGAAATTGTTCTTCAGTCATTTTTTGCGGCTGATTATTCTGTTGGTGCTGGTGGCTGCCGGCACCTTCATTTTGCTTAGC
TTTTCGCCCGTTGATCCTAT

Product: substrate-binding transport protein

Products: Ni2; [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 544; Mature: 544

Protein sequence:

>544_residues
MLRREKQKQRIIWDKLMIKGKLALVTCALTLVFTSSLFAASDTADGRTLKLAIGPEPTEGFDPMLGWSHGSYLLLHAPLL
KQNADMSWGDLLTEKVDTSPDGKIWTLTLKPGLKFSDGSPLTAEDVVFTYNKAAKSGGKIDMGNFSHARALDARRIEMTL
SHPQSTFVNVLGSLGIVPASRYDEKTFAREPIGAGPYRLVSFQPGQQLIVEANPWYAGKKNDFNRLVFVFLDEDNAYAAA
RSGQLGLVRIAPSMAVTPQQDNLKLWVRDSVENRGIVFPMVPAGKKDANGYPVGNDVTADVAIRRAINYAINRKQLAEQV
MEGHAIPAYSAVQGLPWQNPSVVFSDGDIAKARAILEEAGWKINSAGVREKAGKEARLTLWYASGDSTRRDLAEAVRAML
QRLGIVVSLQSGSWETVERHMHANPTLFGWGSLDPMELFHHYSGKAAGVEYYNPGYYSNPAVEAHLKQAIDAPDWQKAIP
FWQQVEWDGKQGAGVQGDAAWAWLLNIQHTYLANPCIDLGKGSPEIHGSWSVLNNLDDWTWTCR

Sequences:

>Translated_544_residues
MLRREKQKQRIIWDKLMIKGKLALVTCALTLVFTSSLFAASDTADGRTLKLAIGPEPTEGFDPMLGWSHGSYLLLHAPLL
KQNADMSWGDLLTEKVDTSPDGKIWTLTLKPGLKFSDGSPLTAEDVVFTYNKAAKSGGKIDMGNFSHARALDARRIEMTL
SHPQSTFVNVLGSLGIVPASRYDEKTFAREPIGAGPYRLVSFQPGQQLIVEANPWYAGKKNDFNRLVFVFLDEDNAYAAA
RSGQLGLVRIAPSMAVTPQQDNLKLWVRDSVENRGIVFPMVPAGKKDANGYPVGNDVTADVAIRRAINYAINRKQLAEQV
MEGHAIPAYSAVQGLPWQNPSVVFSDGDIAKARAILEEAGWKINSAGVREKAGKEARLTLWYASGDSTRRDLAEAVRAML
QRLGIVVSLQSGSWETVERHMHANPTLFGWGSLDPMELFHHYSGKAAGVEYYNPGYYSNPAVEAHLKQAIDAPDWQKAIP
FWQQVEWDGKQGAGVQGDAAWAWLLNIQHTYLANPCIDLGKGSPEIHGSWSVLNNLDDWTWTCR
>Mature_544_residues
MLRREKQKQRIIWDKLMIKGKLALVTCALTLVFTSSLFAASDTADGRTLKLAIGPEPTEGFDPMLGWSHGSYLLLHAPLL
KQNADMSWGDLLTEKVDTSPDGKIWTLTLKPGLKFSDGSPLTAEDVVFTYNKAAKSGGKIDMGNFSHARALDARRIEMTL
SHPQSTFVNVLGSLGIVPASRYDEKTFAREPIGAGPYRLVSFQPGQQLIVEANPWYAGKKNDFNRLVFVFLDEDNAYAAA
RSGQLGLVRIAPSMAVTPQQDNLKLWVRDSVENRGIVFPMVPAGKKDANGYPVGNDVTADVAIRRAINYAINRKQLAEQV
MEGHAIPAYSAVQGLPWQNPSVVFSDGDIAKARAILEEAGWKINSAGVREKAGKEARLTLWYASGDSTRRDLAEAVRAML
QRLGIVVSLQSGSWETVERHMHANPTLFGWGSLDPMELFHHYSGKAAGVEYYNPGYYSNPAVEAHLKQAIDAPDWQKAIP
FWQQVEWDGKQGAGVQGDAAWAWLLNIQHTYLANPCIDLGKGSPEIHGSWSVLNNLDDWTWTCR

Specific function: Required for transport of an unidentified substrate [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789887, Length=407, Percent_Identity=24.8157248157248, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI1787762, Length=449, Percent_Identity=25.8351893095768, Blast_Score=90, Evalue=5e-19,
Organism=Escherichia coli, GI1787052, Length=487, Percent_Identity=22.7926078028747, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1789966, Length=513, Percent_Identity=23.3918128654971, Blast_Score=82, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 60063; Mature: 60063

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRREKQKQRIIWDKLMIKGKLALVTCALTLVFTSSLFAASDTADGRTLKLAIGPEPTEG
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC
FDPMLGWSHGSYLLLHAPLLKQNADMSWGDLLTEKVDTSPDGKIWTLTLKPGLKFSDGSP
CCCCCCCCCCCEEEEECHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCEECCCCC
LTAEDVVFTYNKAAKSGGKIDMGNFSHARALDARRIEMTLSHPQSTFVNVLGSLGIVPAS
CCHHCEEEEECHHHCCCCCEECCCCCHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCC
RYDEKTFAREPIGAGPYRLVSFQPGQQLIVEANPWYAGKKNDFNRLVFVFLDEDNAYAAA
CCCCHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEE
RSGQLGLVRIAPSMAVTPQQDNLKLWVRDSVENRGIVFPMVPAGKKDANGYPVGNDVTAD
CCCCEEEEEECCCEEECCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHH
VAIRRAINYAINRKQLAEQVMEGHAIPAYSAVQGLPWQNPSVVFSDGDIAKARAILEEAG
HHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHC
WKINSAGVREKAGKEARLTLWYASGDSTRRDLAEAVRAMLQRLGIVVSLQSGSWETVERH
CEECCCCCHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHH
MHANPTLFGWGSLDPMELFHHYSGKAAGVEYYNPGYYSNPAVEAHLKQAIDAPDWQKAIP
HCCCCCEEECCCCCHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCHHHHCC
FWQQVEWDGKQGAGVQGDAAWAWLLNIQHTYLANPCIDLGKGSPEIHGSWSVLNNLDDWT
HHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCE
WTCR
EEEC
>Mature Secondary Structure
MLRREKQKQRIIWDKLMIKGKLALVTCALTLVFTSSLFAASDTADGRTLKLAIGPEPTEG
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC
FDPMLGWSHGSYLLLHAPLLKQNADMSWGDLLTEKVDTSPDGKIWTLTLKPGLKFSDGSP
CCCCCCCCCCCEEEEECHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCEECCCCC
LTAEDVVFTYNKAAKSGGKIDMGNFSHARALDARRIEMTLSHPQSTFVNVLGSLGIVPAS
CCHHCEEEEECHHHCCCCCEECCCCCHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCC
RYDEKTFAREPIGAGPYRLVSFQPGQQLIVEANPWYAGKKNDFNRLVFVFLDEDNAYAAA
CCCCHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEE
RSGQLGLVRIAPSMAVTPQQDNLKLWVRDSVENRGIVFPMVPAGKKDANGYPVGNDVTAD
CCCCEEEEEECCCEEECCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHH
VAIRRAINYAINRKQLAEQVMEGHAIPAYSAVQGLPWQNPSVVFSDGDIAKARAILEEAG
HHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHC
WKINSAGVREKAGKEARLTLWYASGDSTRRDLAEAVRAMLQRLGIVVSLQSGSWETVERH
CEECCCCCHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHH
MHANPTLFGWGSLDPMELFHHYSGKAAGVEYYNPGYYSNPAVEAHLKQAIDAPDWQKAIP
HCCCCCEEECCCCCHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCHHHHCC
FWQQVEWDGKQGAGVQGDAAWAWLLNIQHTYLANPCIDLGKGSPEIHGSWSVLNNLDDWT
HHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCE
WTCR
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Ni2; [Periplasm]; ATP; H2O [C]

Specific reaction: Ni2+ [Periplasm] + ATP + H2O = Ni2+ [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3453116 [H]