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The map label for this gene is nudL [H]

Identifier: 29141527

GI number: 29141527

Start: 1136416

End: 1136994

Strand: Reverse

Name: nudL [H]

Synonym: t1052

Alternate gene names: 29141527

Gene position: 1136994-1136416 (Counterclockwise)

Preceding gene: 29141528

Following gene: 29141526

Centisome position: 23.73

GC content: 58.72

Gene sequence:

>579_bases
GTGGATACCAGCCGTCTGACGCTCGATCATTTCTTATCGCGCTTTCAGCTTTTGCGCCCGCAGATGACTCATGAAACGTT
AAATCAACGTCAGGCCGCCGTACTGATCCCTGTGGTTCGCCGCCCCCAGCCGGGGCTGCTGTTGACCCAGCGGGCTATTC
ATTTGCGCAAACACGCCGGACAGGTCGCCTTTCCCGGCGGGGCCGTGGACAGTACCGATGCTTCGCTTATCGCCGCAGCG
CTTCGCGAAGCGCAGGAGGAAGTCGCCATCCCGCCGCAAGCCGTGGAAGTGATTGGCGTTTTACCGCCGGTAGACAGCGT
GACCGGTTTTCAGGTCACCTCGGTGGTCGGCATTATTCCGCCAAATCTCCCCTGGCGCGCCAGTGAAGACGAAGTGTCTG
CGGTGTTTGAAATGCCGCTGGCGCAAGCGTTGCAACTGGGTCGATATCATCCGCTTGATGTTTACCGTCGCGGCAATTCG
CACCGCGTATGGCTCTCCTGGTATGAGCATTATTTCGTCTGGGGCATGACCGCAAACATTCTTCGTGAGCTGGCGCTGCA
AATCGGCGTAAAGCCCTGA

Upstream 100 bases:

>100_bases
AGCCGGCGGCGGTATCGTGGCCGATAGCAACGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGC
ACCCACTGGAGAACTAATAC

Downstream 100 bases:

>100_bases
CTGTACACAACGCCATTCACGTTGCCTCAAGGCGGTAACAATCGCCTCCCCCAAAGAGGCAGCCTGAAGGGCAACGTGTA
TATACTTAACTTTACGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MDTSRLTLDHFLSRFQLLRPQMTHETLNQRQAAVLIPVVRRPQPGLLLTQRAIHLRKHAGQVAFPGGAVDSTDASLIAAA
LREAQEEVAIPPQAVEVIGVLPPVDSVTGFQVTSVVGIIPPNLPWRASEDEVSAVFEMPLAQALQLGRYHPLDVYRRGNS
HRVWLSWYEHYFVWGMTANILRELALQIGVKP

Sequences:

>Translated_192_residues
MDTSRLTLDHFLSRFQLLRPQMTHETLNQRQAAVLIPVVRRPQPGLLLTQRAIHLRKHAGQVAFPGGAVDSTDASLIAAA
LREAQEEVAIPPQAVEVIGVLPPVDSVTGFQVTSVVGIIPPNLPWRASEDEVSAVFEMPLAQALQLGRYHPLDVYRRGNS
HRVWLSWYEHYFVWGMTANILRELALQIGVKP
>Mature_192_residues
MDTSRLTLDHFLSRFQLLRPQMTHETLNQRQAAVLIPVVRRPQPGLLLTQRAIHLRKHAGQVAFPGGAVDSTDASLIAAA
LREAQEEVAIPPQAVEVIGVLPPVDSVTGFQVTSVVGIIPPNLPWRASEDEVSAVFEMPLAQALQLGRYHPLDVYRRGNS
HRVWLSWYEHYFVWGMTANILRELALQIGVKP

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=160, Percent_Identity=38.125, Blast_Score=84, Evalue=6e-17,
Organism=Escherichia coli, GI1788115, Length=192, Percent_Identity=86.9791666666667, Blast_Score=316, Evalue=8e-88,
Organism=Caenorhabditis elegans, GI17536993, Length=118, Percent_Identity=38.135593220339, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI18859683, Length=189, Percent_Identity=29.6296296296296, Blast_Score=76, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 21421; Mature: 21421

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: PS01293 UPF0035

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTSRLTLDHFLSRFQLLRPQMTHETLNQRQAAVLIPVVRRPQPGLLLTQRAIHLRKHAG
CCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCC
QVAFPGGAVDSTDASLIAAALREAQEEVAIPPQAVEVIGVLPPVDSVTGFQVTSVVGIIP
CEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEHHHEEEECC
PNLPWRASEDEVSAVFEMPLAQALQLGRYHPLDVYRRGNSHRVWLSWYEHYFVWGMTANI
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCEEEEEHHHHHHHHCCHHHH
LRELALQIGVKP
HHHHHHHHCCCC
>Mature Secondary Structure
MDTSRLTLDHFLSRFQLLRPQMTHETLNQRQAAVLIPVVRRPQPGLLLTQRAIHLRKHAG
CCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCC
QVAFPGGAVDSTDASLIAAALREAQEEVAIPPQAVEVIGVLPPVDSVTGFQVTSVVGIIP
CEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEHHHEEEECC
PNLPWRASEDEVSAVFEMPLAQALQLGRYHPLDVYRRGNSHRVWLSWYEHYFVWGMTANI
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCEEEEEHHHHHHHHCCHHHH
LRELALQIGVKP
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA