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The map label for this gene is cbiD [H]

Identifier: 29141338

GI number: 29141338

Start: 936377

End: 937516

Strand: Direct

Name: cbiD [H]

Synonym: t0842

Alternate gene names: 29141338

Gene position: 936377-937516 (Clockwise)

Preceding gene: 29141337

Following gene: 29141339

Centisome position: 19.54

GC content: 55.7

Gene sequence:

>1140_bases
ATGAGCGAGCTTTCTTTTGACGCGCCGGTCTGGCGCCACGGTAAAGCGTTACGTAAAGGATATACCACCGGTTCCTGCGC
GACGGCGGCGGCAAAAGTCGCCGAGCTGATGGTATTACGTCAACATCTGATTCATCAGGTCTCCATCGTCACGCCGTCGG
GCGTCACGCTATGCCTGAACGTGGAGTCGCCGCACATTGAAGGCCAGCAGGCGATAGCCGCAATTCGTAAAGATGGCGGC
GATGACGTGGATGCCACGCACGGGATGCTGATTTTTGCCCGCGTTACGCTCAACGACAGCGGTGAGATTACGCTCACTGG
CGGCGAAGGTATTGGTACGGTAACGCGTAAAGGGGTTGGACTGCCGCTCGGGAGCGCTGCCATCAATCGTACGCCGCGCC
ATACCATTGAATCTGCGGTGCGCGAAGCGATAGGCCCGGCGCGTGGGGCTGATGTGGAGATTTTTGCCCCGGAAGGCGAA
GTGCGGGCGCAGAAAACCTATAACTCGCGGCTTGGCATTCTTGGCGGCATTTCCATTATTGGCACTACCGGTATTGTGAC
GCCGATGTCGGAAGAAAGCTGGAAACGCTCGCTATCGCTGGAACTGGAGATCAAACGGGCGTCAGGATTAACGCGGGTGA
TACTCGTGCCGGGCAACCACGGCGAACGGTTTGTTCGCGAACAAATGGGCGTCGACACACAGGCGGTCGTCACCATGAGC
AATTTTGTCGGCTACATGATTGAAGAGGCGGTACGGCTGGGATTTTGCCAGATAGTGCTGGTGGGTCATCCTGGAAAATT
GATCAAAATCGCCGCCGGGATCTTTCATACCCATAGCCATATCGCCGATGCGCGCATGGAAACGCTGGTCGCGCATTTAG
CTTTACTGGGCGCGCCGCTGGAGTTACTCACCCTGGTCGGCGATTGCGATACCACTGAAGCGGCAATGGAGCACATTGAA
GCATATGGCTTCGGGCATATCTATAACCATCTTGCCAGGCGTATTTGTTTGCGAGTCATGCAGATGCTGCGTTTTACCAA
AACGCCGCCTGTCTGCGACGCCATCCTGTTTTCTTTTGATAACCATATTCTCGGCAGTAATCGTCCCGTCGACGAGATTG
CTAAGGAGCTGCAATGCTAA

Upstream 100 bases:

>100_bases
ATAGCCATTTTCCCGCGGTTGCCGCGTTAGGGCGTAAAGGCGGCAGTAACGTGGCTGCCGCTATCGTCAATGCGCTGCTC
TATCACCTCCGGGAGGCCTG

Downstream 100 bases:

>100_bases
CGGTCGTGGGAATGGGGCCCGCTGGACGGCATTTGATGACGCCTGCGGCGCTGGAAGCGATAGACCACGCCGATGCGCTG
GCAGGCGGTAAACGGCATTT

Product: cobalt-precorrin-6A synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MSELSFDAPVWRHGKALRKGYTTGSCATAAAKVAELMVLRQHLIHQVSIVTPSGVTLCLNVESPHIEGQQAIAAIRKDGG
DDVDATHGMLIFARVTLNDSGEITLTGGEGIGTVTRKGVGLPLGSAAINRTPRHTIESAVREAIGPARGADVEIFAPEGE
VRAQKTYNSRLGILGGISIIGTTGIVTPMSEESWKRSLSLELEIKRASGLTRVILVPGNHGERFVREQMGVDTQAVVTMS
NFVGYMIEEAVRLGFCQIVLVGHPGKLIKIAAGIFHTHSHIADARMETLVAHLALLGAPLELLTLVGDCDTTEAAMEHIE
AYGFGHIYNHLARRICLRVMQMLRFTKTPPVCDAILFSFDNHILGSNRPVDEIAKELQC

Sequences:

>Translated_379_residues
MSELSFDAPVWRHGKALRKGYTTGSCATAAAKVAELMVLRQHLIHQVSIVTPSGVTLCLNVESPHIEGQQAIAAIRKDGG
DDVDATHGMLIFARVTLNDSGEITLTGGEGIGTVTRKGVGLPLGSAAINRTPRHTIESAVREAIGPARGADVEIFAPEGE
VRAQKTYNSRLGILGGISIIGTTGIVTPMSEESWKRSLSLELEIKRASGLTRVILVPGNHGERFVREQMGVDTQAVVTMS
NFVGYMIEEAVRLGFCQIVLVGHPGKLIKIAAGIFHTHSHIADARMETLVAHLALLGAPLELLTLVGDCDTTEAAMEHIE
AYGFGHIYNHLARRICLRVMQMLRFTKTPPVCDAILFSFDNHILGSNRPVDEIAKELQC
>Mature_378_residues
SELSFDAPVWRHGKALRKGYTTGSCATAAAKVAELMVLRQHLIHQVSIVTPSGVTLCLNVESPHIEGQQAIAAIRKDGGD
DVDATHGMLIFARVTLNDSGEITLTGGEGIGTVTRKGVGLPLGSAAINRTPRHTIESAVREAIGPARGADVEIFAPEGEV
RAQKTYNSRLGILGGISIIGTTGIVTPMSEESWKRSLSLELEIKRASGLTRVILVPGNHGERFVREQMGVDTQAVVTMSN
FVGYMIEEAVRLGFCQIVLVGHPGKLIKIAAGIFHTHSHIADARMETLVAHLALLGAPLELLTLVGDCDTTEAAMEHIEA
YGFGHIYNHLARRICLRVMQMLRFTKTPPVCDAILFSFDNHILGSNRPVDEIAKELQC

Specific function: May catalyze the methylation of C-1 in cobalt-precorrin- 5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A [H]

COG id: COG1903

COG function: function code H; Cobalamin biosynthesis protein CbiD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002748 [H]

Pfam domain/function: PF01888 CbiD [H]

EC number: NA

Molecular weight: Translated: 40862; Mature: 40731

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELSFDAPVWRHGKALRKGYTTGSCATAAAKVAELMVLRQHLIHQVSIVTPSGVTLCLN
CCCCCCCCCHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEE
VESPHIEGQQAIAAIRKDGGDDVDATHGMLIFARVTLNDSGEITLTGGEGIGTVTRKGVG
CCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCEEEECCCCCCCHHHCCCC
LPLGSAAINRTPRHTIESAVREAIGPARGADVEIFAPEGEVRAQKTYNSRLGILGGISII
CCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHCCCCCHHCCHHEE
GTTGIVTPMSEESWKRSLSLELEIKRASGLTRVILVPGNHGERFVREQMGVDTQAVVTMS
ECCCCCCCCCHHHHHHCEEEEEEEEECCCCEEEEEEECCCCHHHHHHHHCCCHHHHHHHH
NFVGYMIEEAVRLGFCQIVLVGHPGKLIKIAAGIFHTHSHIADARMETLVAHLALLGAPL
HHHHHHHHHHHHHCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ELLTLVGDCDTTEAAMEHIEAYGFGHIYNHLARRICLRVMQMLRFTKTPPVCDAILFSFD
HHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
NHILGSNRPVDEIAKELQC
CCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
SELSFDAPVWRHGKALRKGYTTGSCATAAAKVAELMVLRQHLIHQVSIVTPSGVTLCLN
CCCCCCCCHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEE
VESPHIEGQQAIAAIRKDGGDDVDATHGMLIFARVTLNDSGEITLTGGEGIGTVTRKGVG
CCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCEEEECCCCCCCHHHCCCC
LPLGSAAINRTPRHTIESAVREAIGPARGADVEIFAPEGEVRAQKTYNSRLGILGGISII
CCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHCCCCCHHCCHHEE
GTTGIVTPMSEESWKRSLSLELEIKRASGLTRVILVPGNHGERFVREQMGVDTQAVVTMS
ECCCCCCCCCHHHHHHCEEEEEEEEECCCCEEEEEEECCCCHHHHHHHHCCCHHHHHHHH
NFVGYMIEEAVRLGFCQIVLVGHPGKLIKIAAGIFHTHSHIADARMETLVAHLALLGAPL
HHHHHHHHHHHHHCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ELLTLVGDCDTTEAAMEHIEAYGFGHIYNHLARRICLRVMQMLRFTKTPPVCDAILFSFD
HHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
NHILGSNRPVDEIAKELQC
CCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA