Click here to switch to the map view.

The map label for this gene is phsC [H]

Identifier: 29141310

GI number: 29141310

Start: 909071

End: 909835

Strand: Direct

Name: phsC [H]

Synonym: t0811

Alternate gene names: 29141310

Gene position: 909071-909835 (Clockwise)

Preceding gene: 29141309

Following gene: 29141311

Centisome position: 18.97

GC content: 52.16

Gene sequence:

>765_bases
ATGAATACTATCTGGGGAGCGGAACTACATTATGCGCCAGATTATTGGCCGCTGTGGTTAATTTACGCAGGCGTCGTGGT
GCTGCTCATGCTTGTTGGGCTGGTTATCCATGCGTTATTGCGCCGGATGCTGGCGCCAAAAACGGCGGGCGGCGAAGAGC
ATCGTGACTATCTCTACTCGCTGGCGATTCGCCGTTGGCATTGGGGAAATGCATTACTGTTTGTTTTATTACTGTTAAGC
GGTTTATTTGGTCATTTTTCTCTCGGCCCTGTAGCGCTAATGGTACAAGTGCATACCTGGTGTGGTTTTGCCTTACTGGC
TTTCTGGGTCGGGTTTGTGCTGATCAACCTCACCACAGGTAACGGGCGTCACTATCGGGTAAATTTTTCCGGACTAGTGA
CGCGCTGCATACGCCAGACCCGTTTTTACCTTTTTGGCATCATGAAAGGGGAAGCGCATCCGTTCGCGGCAACAGAGCAG
AATAAGTTCAATCCACTGCAGCAACTGGCATATCTGGCGATTATGTACGCGCTGGTACCGCTGTTAATCATCACCGGTTT
GCTGTGTCTCTATCCGCAGGTTGCGGGTCTGGGCCCTGTGATGCTGGTGCTGCATATGGCGCTTGCTATCATCGGCTTAC
TGTTTATTTGCGCGCATCTCTATCTGTGTACTCTTGGCGACACGCCGGGACAAATTTTCCGTAGCATGGTTGACGGCTAT
CATCGTCATCGTACCGCGCCGCGCGGGGATAAGTCCGCCGTCTGA

Upstream 100 bases:

>100_bases
AGCGCTGGGTCGGTCAGAAAGAGGTCTATCGCCAGCAGGAAGCGCGTAGCGGCGCGGTCAGTCTGTACCGTCGTAAAGAA
GTCCATCAGGAGGGTAAAGC

Downstream 100 bases:

>100_bases
GCGTATCCATAAAATAAAGTCAGCAAGAAAATGTGCCTTGTGTCACATTTTCTTGCAATTTATCCATGTTTGTTTAACTG
AACTTCCGTAAAAAGAACGG

Product: thiosulfate reductase cytochrome b subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MNTIWGAELHYAPDYWPLWLIYAGVVVLLMLVGLVIHALLRRMLAPKTAGGEEHRDYLYSLAIRRWHWGNALLFVLLLLS
GLFGHFSLGPVALMVQVHTWCGFALLAFWVGFVLINLTTGNGRHYRVNFSGLVTRCIRQTRFYLFGIMKGEAHPFAATEQ
NKFNPLQQLAYLAIMYALVPLLIITGLLCLYPQVAGLGPVMLVLHMALAIIGLLFICAHLYLCTLGDTPGQIFRSMVDGY
HRHRTAPRGDKSAV

Sequences:

>Translated_254_residues
MNTIWGAELHYAPDYWPLWLIYAGVVVLLMLVGLVIHALLRRMLAPKTAGGEEHRDYLYSLAIRRWHWGNALLFVLLLLS
GLFGHFSLGPVALMVQVHTWCGFALLAFWVGFVLINLTTGNGRHYRVNFSGLVTRCIRQTRFYLFGIMKGEAHPFAATEQ
NKFNPLQQLAYLAIMYALVPLLIITGLLCLYPQVAGLGPVMLVLHMALAIIGLLFICAHLYLCTLGDTPGQIFRSMVDGY
HRHRTAPRGDKSAV
>Mature_254_residues
MNTIWGAELHYAPDYWPLWLIYAGVVVLLMLVGLVIHALLRRMLAPKTAGGEEHRDYLYSLAIRRWHWGNALLFVLLLLS
GLFGHFSLGPVALMVQVHTWCGFALLAFWVGFVLINLTTGNGRHYRVNFSGLVTRCIRQTRFYLFGIMKGEAHPFAATEQ
NKFNPLQQLAYLAIMYALVPLLIITGLLCLYPQVAGLGPVMLVLHMALAIIGLLFICAHLYLCTLGDTPGQIFRSMVDGY
HRHRTAPRGDKSAV

Specific function: Membrane anchoring protein for the phs system oxidoreductase which produces hydrogen sulfide from thiosulfate (Potential) [H]

COG id: COG4117

COG function: function code C; Thiosulfate reductase cytochrome B subunit (membrane anchoring protein)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787959, Length=242, Percent_Identity=56.198347107438, Blast_Score=239, Evalue=1e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011577
- InterPro:   IPR016174 [H]

Pfam domain/function: PF01292 Ni_hydr_CYTB [H]

EC number: NA

Molecular weight: Translated: 28520; Mature: 28520

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTIWGAELHYAPDYWPLWLIYAGVVVLLMLVGLVIHALLRRMLAPKTAGGEEHRDYLYS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LAIRRWHWGNALLFVLLLLSGLFGHFSLGPVALMVQVHTWCGFALLAFWVGFVLINLTTG
HHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
NGRHYRVNFSGLVTRCIRQTRFYLFGIMKGEAHPFAATEQNKFNPLQQLAYLAIMYALVP
CCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LLIITGLLCLYPQVAGLGPVMLVLHMALAIIGLLFICAHLYLCTLGDTPGQIFRSMVDGY
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
HRHRTAPRGDKSAV
HHHCCCCCCCCCCC
>Mature Secondary Structure
MNTIWGAELHYAPDYWPLWLIYAGVVVLLMLVGLVIHALLRRMLAPKTAGGEEHRDYLYS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LAIRRWHWGNALLFVLLLLSGLFGHFSLGPVALMVQVHTWCGFALLAFWVGFVLINLTTG
HHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
NGRHYRVNFSGLVTRCIRQTRFYLFGIMKGEAHPFAATEQNKFNPLQQLAYLAIMYALVP
CCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LLIITGLLCLYPQVAGLGPVMLVLHMALAIIGLLFICAHLYLCTLGDTPGQIFRSMVDGY
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
HRHRTAPRGDKSAV
HHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7751291; 7737516; 11677609 [H]