| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is rfbV [H]
Identifier: 29141286
GI number: 29141286
Start: 878272
End: 879273
Strand: Direct
Name: rfbV [H]
Synonym: t0786
Alternate gene names: 29141286
Gene position: 878272-879273 (Clockwise)
Preceding gene: 29141285
Following gene: 29141287
Centisome position: 18.33
GC content: 32.63
Gene sequence:
>1002_bases ATGAAGGTATCATTTTGTATCCCAACGTATAATCGAGTAAAATTCATTGAAGACCTTCTTGAAAGTATTAATAATCAATC TTCTCACTCCTTAATTGTAGAAGTATGTATTTCAGATAATGCATCAACTGATGGAACTGAAGAATCAATAAATATCTGGA GAGATAGATTTAATTTTCCAATTTTATATCAAAGGCATAACGAAAATATTGGGCCAGATAGGAATTATTTATCTGCAGTT AATATGGGGACTGGAGATTATTGTTGGATTTTCGGAAGTGATGATATTCTTACAAAAAATTCCCTTGCATTGATGGAAGA TAAATTGGCTGCCGGAAGTGACATTTATTTATGTGACAGACGAGAATTAGATATTTCAATGACGAAAATATCTAATCCAC ATCGGCGATGGTTAAATGGTGGCAGTAGATTATTTTCTTTTAGCAATGAAGCTGATTTGATAGAGTACTTTAGTAAATGT AACTCAGTCGGCGGACTTTTTAGCTACTTAAGCTCTATTATAGTGAAAAGGAATAAATGGTCTGACGTCTTATTTGACGA GTCATACATTGGTACAGCTTATGCGCATGTATATATTTTATTAAGAATAATTAACAATATGAATTCGACCCTGCAGTACA TATCACTGCCACTGGTTGATTGCAGAGGAGATAACGATACATTCGAAAGTAATGGGAAGGCTCGTCGAATAAAAATTGAT TTCATCGGTTATTTAAAACTGAGGGAGGATTTTTATAATAACAATACAAAAATATATATCTCATTTGGACGGGTTCTTAC AAAAGAGCGTCCTTGGCTTTATACTTCTTTAGCTATGGCATGTTATGGTGATTCTACCGATAGAGCTGAACTTGCATCAT TTTATAAGAAGTTGGGATATCCGAAAATAGCCACCAATTTAATATTTTGTCTTAAAGGGCTGGCTAGCTACACTAAAAAA ATAAAATTAGCAAAAATGGTAATAAAAAAAATATTTTCATAG
Upstream 100 bases:
>100_bases ATAGTTGGTATTTTATACGGACTAATTTTATCGTTCTCGCTAACTGTTTTTTGGGGATTGCCAGTGTATTATATGTATAA GAGTAAAAGGCTAGCATAAT
Downstream 100 bases:
>100_bases TATCAACATCAATACAAATCGAGTTTATAGTGTAAAAAATGCTTATGCTATTATTGTCGTGACTATTTAGCGTAAAGTTT ATACGTGTTTTGTAGGATGA
Product: glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MKVSFCIPTYNRVKFIEDLLESINNQSSHSLIVEVCISDNASTDGTEESINIWRDRFNFPILYQRHNENIGPDRNYLSAV NMGTGDYCWIFGSDDILTKNSLALMEDKLAAGSDIYLCDRRELDISMTKISNPHRRWLNGGSRLFSFSNEADLIEYFSKC NSVGGLFSYLSSIIVKRNKWSDVLFDESYIGTAYAHVYILLRIINNMNSTLQYISLPLVDCRGDNDTFESNGKARRIKID FIGYLKLREDFYNNNTKIYISFGRVLTKERPWLYTSLAMACYGDSTDRAELASFYKKLGYPKIATNLIFCLKGLASYTKK IKLAKMVIKKIFS
Sequences:
>Translated_333_residues MKVSFCIPTYNRVKFIEDLLESINNQSSHSLIVEVCISDNASTDGTEESINIWRDRFNFPILYQRHNENIGPDRNYLSAV NMGTGDYCWIFGSDDILTKNSLALMEDKLAAGSDIYLCDRRELDISMTKISNPHRRWLNGGSRLFSFSNEADLIEYFSKC NSVGGLFSYLSSIIVKRNKWSDVLFDESYIGTAYAHVYILLRIINNMNSTLQYISLPLVDCRGDNDTFESNGKARRIKID FIGYLKLREDFYNNNTKIYISFGRVLTKERPWLYTSLAMACYGDSTDRAELASFYKKLGYPKIATNLIFCLKGLASYTKK IKLAKMVIKKIFS >Mature_333_residues MKVSFCIPTYNRVKFIEDLLESINNQSSHSLIVEVCISDNASTDGTEESINIWRDRFNFPILYQRHNENIGPDRNYLSAV NMGTGDYCWIFGSDDILTKNSLALMEDKLAAGSDIYLCDRRELDISMTKISNPHRRWLNGGSRLFSFSNEADLIEYFSKC NSVGGLFSYLSSIIVKRNKWSDVLFDESYIGTAYAHVYILLRIINNMNSTLQYISLPLVDCRGDNDTFESNGKARRIKID FIGYLKLREDFYNNNTKIYISFGRVLTKERPWLYTSLAMACYGDSTDRAELASFYKKLGYPKIATNLIFCLKGLASYTKK IKLAKMVIKKIFS
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 38244; Mature: 38244
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSFCIPTYNRVKFIEDLLESINNQSSHSLIVEVCISDNASTDGTEESINIWRDRFNFP CEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCC ILYQRHNENIGPDRNYLSAVNMGTGDYCWIFGSDDILTKNSLALMEDKLAAGSDIYLCDR EEEEECCCCCCCCCHHHHEEECCCCCEEEEECCCCEECCCCHHHHHHHHCCCCCEEEECC RELDISMTKISNPHRRWLNGGSRLFSFSNEADLIEYFSKCNSVGGLFSYLSSIIVKRNKW CCCCEEEECCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC SDVLFDESYIGTAYAHVYILLRIINNMNSTLQYISLPLVDCRGDNDTFESNGKARRIKID CCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEEEE FIGYLKLREDFYNNNTKIYISFGRVLTKERPWLYTSLAMACYGDSTDRAELASFYKKLGY EEEHHHHHHHHHCCCCEEEEEECHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCC PKIATNLIFCLKGLASYTKKIKLAKMVIKKIFS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKVSFCIPTYNRVKFIEDLLESINNQSSHSLIVEVCISDNASTDGTEESINIWRDRFNFP CEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCC ILYQRHNENIGPDRNYLSAVNMGTGDYCWIFGSDDILTKNSLALMEDKLAAGSDIYLCDR EEEEECCCCCCCCCHHHHEEECCCCCEEEEECCCCEECCCCHHHHHHHHCCCCCEEEECC RELDISMTKISNPHRRWLNGGSRLFSFSNEADLIEYFSKCNSVGGLFSYLSSIIVKRNKW CCCCEEEECCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC SDVLFDESYIGTAYAHVYILLRIINNMNSTLQYISLPLVDCRGDNDTFESNGKARRIKID CCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEEEE FIGYLKLREDFYNNNTKIYISFGRVLTKERPWLYTSLAMACYGDSTDRAELASFYKKLGY EEEHHHHHHHHHCCCCEEEEEECHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCC PKIATNLIFCLKGLASYTKKIKLAKMVIKKIFS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1710759; 11677609 [H]