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The map label for this gene is rfbU [H]

Identifier: 29141287

GI number: 29141287

Start: 879848

End: 880909

Strand: Direct

Name: rfbU [H]

Synonym: t0787

Alternate gene names: 29141287

Gene position: 879848-880909 (Clockwise)

Preceding gene: 29141286

Following gene: 29141288

Centisome position: 18.36

GC content: 34.18

Gene sequence:

>1062_bases
ATGATCGTTAACCTATCACGTTTAGGTAAAAGCGGTACGGGGATGTGGCAATACTCGATTAAATTTTTAACGGCTCTGCG
AGAAATAGCTGATGTTGACGCAATAATCTGTAGCAAGGTACACGCTGATTATTTTGAAAAGCTCGGTTATGCAGTAGTTA
CTGTTCCGAATATTGTTAGCAACACATCAAAAACATCGCGACTTAGACCATTAGTATGGTATGTATATAGTTACTGGCTT
GCGCTGAGGGTTTTAATTAAGTTTGGTAATAAAAAATTGGTGTGTACTACGCATCACACTATTCCCTTACTGAGAAACCA
AACGATAACCATACATGATATAAGACCTTTTTATTATCCAGATAGTCTTATTCAGAAAGTGTATTTTCGCTTTTTATTAA
AAATGTCTGTTAAGCGATGTAAGCATGTTTTAACGGTATCTTATACCGTTAAAGATAGCATTGCTAAAACTTATAATGTA
GATAGTGAGAAAATATCAGTAATTTATAACAGCGTTAGTAAATCTGATTTTATACAAAAAAAAGAAAAAGAGAATTACTT
TTTAGCTGTTGGAGCAAGTTGGCCACATAAAAATATTCATTCATTCATAAAAAATAAAAAAGTTTGGTCTGACTCTTATA
ATTTAATTATTGTATGTGGTCGTACCGACTATGCAATGTCTCTCCAACAAATGGTCGTTGATCTGAAACTAACAGATAAA
GTGACTTTTTTACATGAAGTCTCATTTAATGAATTAAAAGTTTTATATTCTAAAGCCTACGCGCTTGTTTATCCATCTAT
TGATGAGGGTTTTGGCATACCTCCTATTGAAGCGATGGCATCAAATACTCCAGTTATAGTGTCCGATATACCAGTATTTC
ATGAAGTGTTAACCAATGGTGCATTATATGTGAATCCGGATGATGAAAAAAGCTGGCAGAGTGCAATTGAAAATATAGGG
CAGTTGCCTGATGCAATTTCCAGATTTAACAACTATGTCGCACGGTATGACTTTGATAATATGAAGCAGATGGTTGGCAA
TTGGTTGGCGGAATCAAAATAA

Upstream 100 bases:

>100_bases
GATCCGTGGTTCATTTTAATGAAAATGTTTCCTAATAACTATTGGTCGTTCTTGTGATAATCGCTATACAAGCATGAATG
GAAAAACGGAGAGCTATTCA

Downstream 100 bases:

>100_bases
ATGAAAATAACATTAATTATTCCCACATATAATGCAGGGTCACTTTGGCCTAATGTTCTGGATGCGATTAAGCAGCAAAC
TATATATCCGGATAAATTGA

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MIVNLSRLGKSGTGMWQYSIKFLTALREIADVDAIICSKVHADYFEKLGYAVVTVPNIVSNTSKTSRLRPLVWYVYSYWL
ALRVLIKFGNKKLVCTTHHTIPLLRNQTITIHDIRPFYYPDSLIQKVYFRFLLKMSVKRCKHVLTVSYTVKDSIAKTYNV
DSEKISVIYNSVSKSDFIQKKEKENYFLAVGASWPHKNIHSFIKNKKVWSDSYNLIIVCGRTDYAMSLQQMVVDLKLTDK
VTFLHEVSFNELKVLYSKAYALVYPSIDEGFGIPPIEAMASNTPVIVSDIPVFHEVLTNGALYVNPDDEKSWQSAIENIG
QLPDAISRFNNYVARYDFDNMKQMVGNWLAESK

Sequences:

>Translated_353_residues
MIVNLSRLGKSGTGMWQYSIKFLTALREIADVDAIICSKVHADYFEKLGYAVVTVPNIVSNTSKTSRLRPLVWYVYSYWL
ALRVLIKFGNKKLVCTTHHTIPLLRNQTITIHDIRPFYYPDSLIQKVYFRFLLKMSVKRCKHVLTVSYTVKDSIAKTYNV
DSEKISVIYNSVSKSDFIQKKEKENYFLAVGASWPHKNIHSFIKNKKVWSDSYNLIIVCGRTDYAMSLQQMVVDLKLTDK
VTFLHEVSFNELKVLYSKAYALVYPSIDEGFGIPPIEAMASNTPVIVSDIPVFHEVLTNGALYVNPDDEKSWQSAIENIG
QLPDAISRFNNYVARYDFDNMKQMVGNWLAESK
>Mature_353_residues
MIVNLSRLGKSGTGMWQYSIKFLTALREIADVDAIICSKVHADYFEKLGYAVVTVPNIVSNTSKTSRLRPLVWYVYSYWL
ALRVLIKFGNKKLVCTTHHTIPLLRNQTITIHDIRPFYYPDSLIQKVYFRFLLKMSVKRCKHVLTVSYTVKDSIAKTYNV
DSEKISVIYNSVSKSDFIQKKEKENYFLAVGASWPHKNIHSFIKNKKVWSDSYNLIIVCGRTDYAMSLQQMVVDLKLTDK
VTFLHEVSFNELKVLYSKAYALVYPSIDEGFGIPPIEAMASNTPVIVSDIPVFHEVLTNGALYVNPDDEKSWQSAIENIG
QLPDAISRFNNYVARYDFDNMKQMVGNWLAESK

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 40522; Mature: 40522

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVNLSRLGKSGTGMWQYSIKFLTALREIADVDAIICSKVHADYFEKLGYAVVTVPNIVS
CEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHC
NTSKTSRLRPLVWYVYSYWLALRVLIKFGNKKLVCTTHHTIPLLRNQTITIHDIRPFYYP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCEEEEEECCCCCCC
DSLIQKVYFRFLLKMSVKRCKHVLTVSYTVKDSIAKTYNVDSEKISVIYNSVSKSDFIQK
HHHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
KEKENYFLAVGASWPHKNIHSFIKNKKVWSDSYNLIIVCGRTDYAMSLQQMVVDLKLTDK
HCCCCEEEEEECCCCHHHHHHHHHCCCEECCCCCEEEEECCCHHHHHHHHHHHHHEECCC
VTFLHEVSFNELKVLYSKAYALVYPSIDEGFGIPPIEAMASNTPVIVSDIPVFHEVLTNG
EEEEECCCHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHCCCCCEEEECCHHHHHHHHCC
ALYVNPDDEKSWQSAIENIGQLPDAISRFNNYVARYDFDNMKQMVGNWLAESK
EEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHEEECCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIVNLSRLGKSGTGMWQYSIKFLTALREIADVDAIICSKVHADYFEKLGYAVVTVPNIVS
CEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHC
NTSKTSRLRPLVWYVYSYWLALRVLIKFGNKKLVCTTHHTIPLLRNQTITIHDIRPFYYP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCEEEEEECCCCCCC
DSLIQKVYFRFLLKMSVKRCKHVLTVSYTVKDSIAKTYNVDSEKISVIYNSVSKSDFIQK
HHHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
KEKENYFLAVGASWPHKNIHSFIKNKKVWSDSYNLIIVCGRTDYAMSLQQMVVDLKLTDK
HCCCCEEEEEECCCCHHHHHHHHHCCCEECCCCCEEEEECCCHHHHHHHHHHHHHEECCC
VTFLHEVSFNELKVLYSKAYALVYPSIDEGFGIPPIEAMASNTPVIVSDIPVFHEVLTNG
EEEEECCCHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHCCCCCEEEECCHHHHHHHHCC
ALYVNPDDEKSWQSAIENIGQLPDAISRFNNYVARYDFDNMKQMVGNWLAESK
EEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHEEECCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]