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The map label for this gene is yrhL [H]

Identifier: 29140985

GI number: 29140985

Start: 540201

End: 542123

Strand: Reverse

Name: yrhL [H]

Synonym: t0466

Alternate gene names: 29140985

Gene position: 542123-540201 (Counterclockwise)

Preceding gene: 29140986

Following gene: 29140980

Centisome position: 11.31

GC content: 33.18

Gene sequence:

>1923_bases
TTGGAACACTTAAAATACAGACCTGATATAGATGGATTACGCGCAATAGCGGTTTTATCTGTGGTAATATTCCATTATTT
CCCATCATTATTGCCGGGTGGGTTTGTTGGAGTAGATATATTCTTTGTGATATCTGGATACCTTATAACATCAATAATAT
TAAAATCTGCATCAAACAAATCATTTTCATACCTTGATTTCTATAAAAGGAGAGTGCTTAGAATATTTCCAGCATTATCC
ATAGTTCTTGTATCATGTCTTATTGTTGGTTGGATTTATTTATTCCAGGATGATTACAAATTACTTGGTAAGCATGTTTT
TAGTGGCTCATTCTTTATATCAAACTTTACTCTTTGGAGTGAGTCTGGCTATTTTGATTCAAAATCATACCTTAAACCTT
TACTACATTTGTGGTCGCTGGGAATTGAAGAGCAATTTTATATAATATGGCCAGTAGTTATATTGCTATGCTTTAGAAGC
AAAAACCATAACAGAAACATAGTATTATCATGCGCAACTATATTTATAATTAGCTATGCGATTAGCATTTTTACAATGGC
ATCTGATGGCGGAGCTAATTACTACTCTCCCGCATCAAGATTTTGGGAGTTAATGGCTGGAGCGATTATATCCACATTGA
GATTTATAGGAATAAACACTTCGTTATCAAAATTAATGTCCCTGTTAGGAATTATACTAATCGCATTATCAATAACCATG
ATAGATGAAAAGATGTCATTTCCTGGATATATAGCAATAATCCCAATACTTGGCGCCTCTCTTATAATAGCATCTAATGG
TAATGATTTAGTTGTGTCGAAATTGCTTAGTGTTAGGCCTGTTGTTTTCTTTGGTCTTATTAGCTATCCTCTTTATTTGT
GGCATTGGCCTATTTATTCATTCTATCGTTCAATATTTGCTGGCTCACCAGACTACCATGAATTAACTCTTCTTTTATTA
TTATCGTTCTTTTTGGCGATATTAACTTATTATTTAATTGAAAAACCACTGAGAAATTCCAGAAGTAAATATATCACAGC
AATATTATTAGCATTATCTGTATTTGGGACGGGTTTAATTGGCGCATTTATTTTTCATATAAATGGAGTTAAAGACAGGG
AAATCAATAAATCAGCAAGTGAATATGCTTCTGTTACTGACGTGTACAATTATTATAAATATGGAGAACTACTCCGTGGA
GGGATATGTCACTCAGTACAACTTACTGCTGCCATATCCAATGGATGTATAAAAAATGGCAAGCATAATATATTTATCAT
TGGTGATTCTTATGCGGCGGCTCTTTTCAATGGGCTTTCTCATTATATAGATAATAAAGGTTCTGATTATATAATAAGCC
AAATGACAGATGGTAATGCTCCTCCTCTATTTGTTGACGGTAAAGATGATTTACAGAGAAGTGTCATCACTCTAAACAAT
AATAGAATTAATGAAATTAAACGTGTTCAGCCTGAGGTGGTTCTGCTGACATGGTCAGTTCGAGGAACAAATGGAGTACA
TGATAAAAAGTTAGCAATTGATGCGTTATCATTAACCATTAAAAAAATTAAAGAGGCATCCCCTGACTCAAGGATTGTTT
TCATTGGACCAGTCCCGGAATGGAATGCAAATTTAGTTAAAATAATATCTAACTACCTGAGTGAGTTTAAAAAAACTCCA
CCATTGTATATGACATATGGATTAAATAGTGAAATAAGCGAGTGGGACTCTTACTTTAGTAACAATGTTCCAAAAATGGG
AATTGAATATATATCAGCATACAAAGCATTATGTAACGAAAGTGGATGTCTTACAAGAGTTGGTAATGGTCCTGATTTTA
TCACTGCCGTTGATTGGGGACATTTAACAAAGCCTGGTTCTGATTTCCTTTTTAATAAAATTGGAAATAAAATAATCAAA
TAG

Upstream 100 bases:

>100_bases
GATCCACTCGTCATTCCGTTTTCGTTTACACGAAACTTCGGGAATGATGCAAGATGCACAACCATTTTATTAATCTTTTT
TTAAATTGAGGTAATTTAAG

Downstream 100 bases:

>100_bases
ATAGGCTGTTACTATTACATATAAATCCAATATGGAACATGCCAGTCATACTGTGTAACTGCCACTATATTAACGGTGAT
CGCTCAGGCGGTCACCGAAC

Product: lipopolysaccharide modification acyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 640; Mature: 640

Protein sequence:

>640_residues
MEHLKYRPDIDGLRAIAVLSVVIFHYFPSLLPGGFVGVDIFFVISGYLITSIILKSASNKSFSYLDFYKRRVLRIFPALS
IVLVSCLIVGWIYLFQDDYKLLGKHVFSGSFFISNFTLWSESGYFDSKSYLKPLLHLWSLGIEEQFYIIWPVVILLCFRS
KNHNRNIVLSCATIFIISYAISIFTMASDGGANYYSPASRFWELMAGAIISTLRFIGINTSLSKLMSLLGIILIALSITM
IDEKMSFPGYIAIIPILGASLIIASNGNDLVVSKLLSVRPVVFFGLISYPLYLWHWPIYSFYRSIFAGSPDYHELTLLLL
LSFFLAILTYYLIEKPLRNSRSKYITAILLALSVFGTGLIGAFIFHINGVKDREINKSASEYASVTDVYNYYKYGELLRG
GICHSVQLTAAISNGCIKNGKHNIFIIGDSYAAALFNGLSHYIDNKGSDYIISQMTDGNAPPLFVDGKDDLQRSVITLNN
NRINEIKRVQPEVVLLTWSVRGTNGVHDKKLAIDALSLTIKKIKEASPDSRIVFIGPVPEWNANLVKIISNYLSEFKKTP
PLYMTYGLNSEISEWDSYFSNNVPKMGIEYISAYKALCNESGCLTRVGNGPDFITAVDWGHLTKPGSDFLFNKIGNKIIK

Sequences:

>Translated_640_residues
MEHLKYRPDIDGLRAIAVLSVVIFHYFPSLLPGGFVGVDIFFVISGYLITSIILKSASNKSFSYLDFYKRRVLRIFPALS
IVLVSCLIVGWIYLFQDDYKLLGKHVFSGSFFISNFTLWSESGYFDSKSYLKPLLHLWSLGIEEQFYIIWPVVILLCFRS
KNHNRNIVLSCATIFIISYAISIFTMASDGGANYYSPASRFWELMAGAIISTLRFIGINTSLSKLMSLLGIILIALSITM
IDEKMSFPGYIAIIPILGASLIIASNGNDLVVSKLLSVRPVVFFGLISYPLYLWHWPIYSFYRSIFAGSPDYHELTLLLL
LSFFLAILTYYLIEKPLRNSRSKYITAILLALSVFGTGLIGAFIFHINGVKDREINKSASEYASVTDVYNYYKYGELLRG
GICHSVQLTAAISNGCIKNGKHNIFIIGDSYAAALFNGLSHYIDNKGSDYIISQMTDGNAPPLFVDGKDDLQRSVITLNN
NRINEIKRVQPEVVLLTWSVRGTNGVHDKKLAIDALSLTIKKIKEASPDSRIVFIGPVPEWNANLVKIISNYLSEFKKTP
PLYMTYGLNSEISEWDSYFSNNVPKMGIEYISAYKALCNESGCLTRVGNGPDFITAVDWGHLTKPGSDFLFNKIGNKIIK
>Mature_640_residues
MEHLKYRPDIDGLRAIAVLSVVIFHYFPSLLPGGFVGVDIFFVISGYLITSIILKSASNKSFSYLDFYKRRVLRIFPALS
IVLVSCLIVGWIYLFQDDYKLLGKHVFSGSFFISNFTLWSESGYFDSKSYLKPLLHLWSLGIEEQFYIIWPVVILLCFRS
KNHNRNIVLSCATIFIISYAISIFTMASDGGANYYSPASRFWELMAGAIISTLRFIGINTSLSKLMSLLGIILIALSITM
IDEKMSFPGYIAIIPILGASLIIASNGNDLVVSKLLSVRPVVFFGLISYPLYLWHWPIYSFYRSIFAGSPDYHELTLLLL
LSFFLAILTYYLIEKPLRNSRSKYITAILLALSVFGTGLIGAFIFHINGVKDREINKSASEYASVTDVYNYYKYGELLRG
GICHSVQLTAAISNGCIKNGKHNIFIIGDSYAAALFNGLSHYIDNKGSDYIISQMTDGNAPPLFVDGKDDLQRSVITLNN
NRINEIKRVQPEVVLLTWSVRGTNGVHDKKLAIDALSLTIKKIKEASPDSRIVFIGPVPEWNANLVKIISNYLSEFKKTP
PLYMTYGLNSEISEWDSYFSNNVPKMGIEYISAYKALCNESGCLTRVGNGPDFITAVDWGHLTKPGSDFLFNKIGNKIIK

Specific function: Unknown

COG id: COG1835

COG function: function code I; Predicted acyltransferases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyltransferase 3 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17559158, Length=490, Percent_Identity=26.9387755102041, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17560876, Length=524, Percent_Identity=26.3358778625954, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17541014, Length=537, Percent_Identity=27.56052141527, Blast_Score=126, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17541412, Length=490, Percent_Identity=28.3673469387755, Blast_Score=125, Evalue=7e-29,
Organism=Caenorhabditis elegans, GI212640769, Length=479, Percent_Identity=27.348643006263, Blast_Score=123, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI17541016, Length=474, Percent_Identity=28.9029535864979, Blast_Score=122, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI17507299, Length=600, Percent_Identity=24.1666666666667, Blast_Score=121, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17507289, Length=600, Percent_Identity=24.1666666666667, Blast_Score=121, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17507287, Length=372, Percent_Identity=30.1075268817204, Blast_Score=121, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI86562056, Length=612, Percent_Identity=23.202614379085, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI193203181, Length=548, Percent_Identity=24.8175182481752, Blast_Score=117, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17507283, Length=387, Percent_Identity=29.4573643410853, Blast_Score=115, Evalue=7e-26,
Organism=Caenorhabditis elegans, GI17532481, Length=370, Percent_Identity=28.1081081081081, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17509001, Length=553, Percent_Identity=24.7739602169982, Blast_Score=112, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI17507167, Length=378, Percent_Identity=26.7195767195767, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI193208811, Length=386, Percent_Identity=27.720207253886, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17562866, Length=313, Percent_Identity=29.073482428115, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17541414, Length=480, Percent_Identity=24.5833333333333, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17562864, Length=350, Percent_Identity=30, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17507735, Length=361, Percent_Identity=27.4238227146814, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71982248, Length=618, Percent_Identity=24.4336569579288, Blast_Score=107, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17507733, Length=328, Percent_Identity=25.609756097561, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71988046, Length=547, Percent_Identity=24.1316270566728, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17562856, Length=322, Percent_Identity=29.8136645962733, Blast_Score=102, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI193203179, Length=420, Percent_Identity=26.4285714285714, Blast_Score=101, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17542538, Length=403, Percent_Identity=27.2952853598015, Blast_Score=101, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17543924, Length=347, Percent_Identity=27.6657060518732, Blast_Score=101, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17540232, Length=399, Percent_Identity=27.0676691729323, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71984481, Length=350, Percent_Identity=26.5714285714286, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI71983744, Length=467, Percent_Identity=26.7665952890792, Blast_Score=99, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI133903927, Length=540, Percent_Identity=24.2592592592593, Blast_Score=99, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17542762, Length=416, Percent_Identity=25.7211538461538, Blast_Score=99, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI17506687, Length=348, Percent_Identity=27.8735632183908, Blast_Score=96, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI212646204, Length=349, Percent_Identity=26.0744985673352, Blast_Score=96, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI71990417, Length=355, Percent_Identity=25.9154929577465, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI32567150, Length=412, Percent_Identity=26.9417475728155, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI193208625, Length=594, Percent_Identity=24.0740740740741, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI115534354, Length=488, Percent_Identity=25.6147540983607, Blast_Score=93, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17559544, Length=348, Percent_Identity=24.7126436781609, Blast_Score=92, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17531875, Length=348, Percent_Identity=28.1609195402299, Blast_Score=89, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17539118, Length=217, Percent_Identity=29.4930875576037, Blast_Score=89, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI212642133, Length=370, Percent_Identity=25.4054054054054, Blast_Score=76, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17564132, Length=71, Percent_Identity=45.0704225352113, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002656
- InterPro:   IPR013830
- InterPro:   IPR013831 [H]

Pfam domain/function: PF01757 Acyl_transf_3 [H]

EC number: NA

Molecular weight: Translated: 71797; Mature: 71797

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHLKYRPDIDGLRAIAVLSVVIFHYFPSLLPGGFVGVDIFFVISGYLITSIILKSASNK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
SFSYLDFYKRRVLRIFPALSIVLVSCLIVGWIYLFQDDYKLLGKHVFSGSFFISNFTLWS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEC
ESGYFDSKSYLKPLLHLWSLGIEEQFYIIWPVVILLCFRSKNHNRNIVLSCATIFIISYA
CCCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHH
ISIFTMASDGGANYYSPASRFWELMAGAIISTLRFIGINTSLSKLMSLLGIILIALSITM
HHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
IDEKMSFPGYIAIIPILGASLIIASNGNDLVVSKLLSVRPVVFFGLISYPLYLWHWPIYS
HHHHCCCCCCEEEHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYRSIFAGSPDYHELTLLLLLSFFLAILTYYLIEKPLRNSRSKYITAILLALSVFGTGLI
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
GAFIFHINGVKDREINKSASEYASVTDVYNYYKYGELLRGGICHSVQLTAAISNGCIKNG
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCC
KHNIFIIGDSYAAALFNGLSHYIDNKGSDYIISQMTDGNAPPLFVDGKDDLQRSVITLNN
CCEEEEEECHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCHHHHHHCEEEECC
NRINEIKRVQPEVVLLTWSVRGTNGVHDKKLAIDALSLTIKKIKEASPDSRIVFIGPVPE
CCHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
WNANLVKIISNYLSEFKKTPPLYMTYGLNSEISEWDSYFSNNVPKMGIEYISAYKALCNE
CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
SGCLTRVGNGPDFITAVDWGHLTKPGSDFLFNKIGNKIIK
CCCEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MEHLKYRPDIDGLRAIAVLSVVIFHYFPSLLPGGFVGVDIFFVISGYLITSIILKSASNK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
SFSYLDFYKRRVLRIFPALSIVLVSCLIVGWIYLFQDDYKLLGKHVFSGSFFISNFTLWS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEC
ESGYFDSKSYLKPLLHLWSLGIEEQFYIIWPVVILLCFRSKNHNRNIVLSCATIFIISYA
CCCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHH
ISIFTMASDGGANYYSPASRFWELMAGAIISTLRFIGINTSLSKLMSLLGIILIALSITM
HHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
IDEKMSFPGYIAIIPILGASLIIASNGNDLVVSKLLSVRPVVFFGLISYPLYLWHWPIYS
HHHHCCCCCCEEEHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYRSIFAGSPDYHELTLLLLLSFFLAILTYYLIEKPLRNSRSKYITAILLALSVFGTGLI
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
GAFIFHINGVKDREINKSASEYASVTDVYNYYKYGELLRGGICHSVQLTAAISNGCIKNG
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCC
KHNIFIIGDSYAAALFNGLSHYIDNKGSDYIISQMTDGNAPPLFVDGKDDLQRSVITLNN
CCEEEEEECHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCHHHHHHCEEEECC
NRINEIKRVQPEVVLLTWSVRGTNGVHDKKLAIDALSLTIKKIKEASPDSRIVFIGPVPE
CCHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
WNANLVKIISNYLSEFKKTPPLYMTYGLNSEISEWDSYFSNNVPKMGIEYISAYKALCNE
CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
SGCLTRVGNGPDFITAVDWGHLTKPGSDFLFNKIGNKIIK
CCCEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]