| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is pgtB [H]
Identifier: 29140982
GI number: 29140982
Start: 534271
End: 536277
Strand: Direct
Name: pgtB [H]
Synonym: t0461
Alternate gene names: 29140982
Gene position: 534271-536277 (Clockwise)
Preceding gene: 29140981
Following gene: 29140983
Centisome position: 11.15
GC content: 53.96
Gene sequence:
>2007_bases ATGAAGGGGAGATTATTGCAACGGCTTCGTCAGCTCAGTATCAGCAACAGTTTACGGGGTGCATTTTTAACGGGCGCATT ACTGACGCTGATTGTCAGTATGGTCAGCCTTTATTCCTGGCATGAGCAAAGTTCGCAGGTTCGCTATTCGCTTGATGAAT ATTTTCCTCGCATCCACTCCGCTTTTTTAATTGAGGGGAACCTGAATCTGGCCGTGGATCAACTCAATGAATTTTTGCTG GCGCCGAACACGACGGTACGTTTGCAGTTACGTACGCAGATTATTCAGCATCTGGATAAGATTGAGCGTCTCAGTCAGGG GCTTCAGCTTGCTGAGCGCCGGCAACTGGCCGTCATTTTACAGGATAGCCGGACCTTGCTGGCGGAGCTGGACAACGCCC TCTACAACATGTTTTTGGTGCGGGAGAAAGTTAGTGAGCTTTCCGCTCGCATCGACTGGCTCCATGATGATTTCACCACG GAGCTAAATTCGCTGGTACAGGATTTTACCTGGCAGCAAGGGACGCTGCTCGATCAAATTGAGGCGAATCAGGGCGACGC GGCTCAGTACTTGCAACGTTCGCGCGAGGTGCAGAACGAGCAGCAGCAGGTATATACCCTGGCGCGAATTGAAAATCAGA TTGTTGATGACCTGCGCGACAGATTGAATGAGCTCAAGTCCGGCAATAATGACGGGATGCTGGTGGAGACCCATATTCGC TATCTGGAAAACCTAAAAAAAACGGCGGATGAGAATATTCGTGCGCTCGATGACTGGCCCAGTACGATCACGCTGCGGCA AACCATCGACGAACTATTGGAAATCGGGATGGTAAAAAATAAGATGCCCGATACCATGCGCGATTATGTTGCGGCGCAAA AAGCCTTACTGGACGCCAGCCGCGCCAGAGAGGCTACGCTAGGGCGCTTTCGCACGCTGCTTGAGGCGCAGTTAGGTAGT AGTCACCAGCAAATGCAGACGTTCAATCAACGCCTGGAACAGATTGTTCGCGTTAGCGGCGGGCTTATTTTAGTGACGAC GCTCCTGGCGTTGCTACTGGCCTGGGGACTCAACCACTATTTTATCCGTTCCCGACTGGTGAAGCGTTTTACCGCGCTTA ATCAGGCTGTGGTACAGATAGGGCTGGGGAGAACCGACTCGACTATCCCGGTTTACGGGCGCGATGAGCTAGGACGGATA GCCCGCTTGCTACGTCATACGCTGGGCCAGCTCAATATGCAACGCAGGCAGCTTGAACAAGAGGTCGCCGAGCGCAAAGA GATAGAAGCCGACCTGCGCGCCATGCAGGATGAGTTGATTCAGACGGCGAAACTGGCGGTAGTCGGCCAGACCATGACCA CGCTGGCGCATGAAATTAACCAGCCGCTGAATGCGCTTTCAATGTATTTATTTACGGCGGGACGCGCGATTGAACAAGGT CAGAGCGGACAGGCGAGAAATACGCTCACCAAAGCGGAAGGGCTCATTAACCGGATTGACGCCATTATCCGTTCGCTGCG GCAGTTTACCCGTCGGGCGGAGCTGGAAACGCCATTGTATCCCGTTGATCTGCGCCAAACCTTCGTGGCGGCATGGGAGT TATTAGCCATGCGCCACCAATCCCGGCAGGGAGCGCTTTCACTGCCAACCGACACCGTATGGGTTAGCGGCGATGAAGTG CGTATTCAGCAGGTTCTGGTGAATGTGCTGGCGAATGCGCTTGACGCCTGTTCGCATGATGCGGCGATCGCGGTGACATG GCAGACGCAGGGAGAGGCGCTGGAGGTTTATATTGCAGATAACGGCCCTGGCTGGCCTGGGGCGCTGTTGCCCTCTTTAC TCAAGCCGTTTACCACCAGTAAAGCTGTCGGGTTGGGTATTGGGCTGTCGATTAGCGTGTCGCTGATGGCGCAAATGAAG GGCGACCTGCGTCTGGCGTCGACGCTGACGCGTAATGCTTGCGTGGTGCTGCAATTCTCGGTAACGGATGTCGATGATGT TGAATGA
Upstream 100 bases:
>100_bases AGTTTGATAATAAAAGCTTTGCCGAACAAAAAATGATGGAGTGGCAGATCTGGTTTCTGAACAATCAGCGGCTGGCGATT CACAAACTGGAAGAGCTGAA
Downstream 100 bases:
>100_bases TGAATGTTCTATTTTGCTGATTGATGATGACGTTGATGTACTTGACGCCTATACCCAAATGCTTGAGCAGGCAGGCTACC GCGTGCGTGGCTTTACCCAT
Product: phosphoglycerate transport system sensor protein PgtB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 668; Mature: 668
Protein sequence:
>668_residues MKGRLLQRLRQLSISNSLRGAFLTGALLTLIVSMVSLYSWHEQSSQVRYSLDEYFPRIHSAFLIEGNLNLAVDQLNEFLL APNTTVRLQLRTQIIQHLDKIERLSQGLQLAERRQLAVILQDSRTLLAELDNALYNMFLVREKVSELSARIDWLHDDFTT ELNSLVQDFTWQQGTLLDQIEANQGDAAQYLQRSREVQNEQQQVYTLARIENQIVDDLRDRLNELKSGNNDGMLVETHIR YLENLKKTADENIRALDDWPSTITLRQTIDELLEIGMVKNKMPDTMRDYVAAQKALLDASRAREATLGRFRTLLEAQLGS SHQQMQTFNQRLEQIVRVSGGLILVTTLLALLLAWGLNHYFIRSRLVKRFTALNQAVVQIGLGRTDSTIPVYGRDELGRI ARLLRHTLGQLNMQRRQLEQEVAERKEIEADLRAMQDELIQTAKLAVVGQTMTTLAHEINQPLNALSMYLFTAGRAIEQG QSGQARNTLTKAEGLINRIDAIIRSLRQFTRRAELETPLYPVDLRQTFVAAWELLAMRHQSRQGALSLPTDTVWVSGDEV RIQQVLVNVLANALDACSHDAAIAVTWQTQGEALEVYIADNGPGWPGALLPSLLKPFTTSKAVGLGIGLSISVSLMAQMK GDLRLASTLTRNACVVLQFSVTDVDDVE
Sequences:
>Translated_668_residues MKGRLLQRLRQLSISNSLRGAFLTGALLTLIVSMVSLYSWHEQSSQVRYSLDEYFPRIHSAFLIEGNLNLAVDQLNEFLL APNTTVRLQLRTQIIQHLDKIERLSQGLQLAERRQLAVILQDSRTLLAELDNALYNMFLVREKVSELSARIDWLHDDFTT ELNSLVQDFTWQQGTLLDQIEANQGDAAQYLQRSREVQNEQQQVYTLARIENQIVDDLRDRLNELKSGNNDGMLVETHIR YLENLKKTADENIRALDDWPSTITLRQTIDELLEIGMVKNKMPDTMRDYVAAQKALLDASRAREATLGRFRTLLEAQLGS SHQQMQTFNQRLEQIVRVSGGLILVTTLLALLLAWGLNHYFIRSRLVKRFTALNQAVVQIGLGRTDSTIPVYGRDELGRI ARLLRHTLGQLNMQRRQLEQEVAERKEIEADLRAMQDELIQTAKLAVVGQTMTTLAHEINQPLNALSMYLFTAGRAIEQG QSGQARNTLTKAEGLINRIDAIIRSLRQFTRRAELETPLYPVDLRQTFVAAWELLAMRHQSRQGALSLPTDTVWVSGDEV RIQQVLVNVLANALDACSHDAAIAVTWQTQGEALEVYIADNGPGWPGALLPSLLKPFTTSKAVGLGIGLSISVSLMAQMK GDLRLASTLTRNACVVLQFSVTDVDDVE >Mature_668_residues MKGRLLQRLRQLSISNSLRGAFLTGALLTLIVSMVSLYSWHEQSSQVRYSLDEYFPRIHSAFLIEGNLNLAVDQLNEFLL APNTTVRLQLRTQIIQHLDKIERLSQGLQLAERRQLAVILQDSRTLLAELDNALYNMFLVREKVSELSARIDWLHDDFTT ELNSLVQDFTWQQGTLLDQIEANQGDAAQYLQRSREVQNEQQQVYTLARIENQIVDDLRDRLNELKSGNNDGMLVETHIR YLENLKKTADENIRALDDWPSTITLRQTIDELLEIGMVKNKMPDTMRDYVAAQKALLDASRAREATLGRFRTLLEAQLGS SHQQMQTFNQRLEQIVRVSGGLILVTTLLALLLAWGLNHYFIRSRLVKRFTALNQAVVQIGLGRTDSTIPVYGRDELGRI ARLLRHTLGQLNMQRRQLEQEVAERKEIEADLRAMQDELIQTAKLAVVGQTMTTLAHEINQPLNALSMYLFTAGRAIEQG QSGQARNTLTKAEGLINRIDAIIRSLRQFTRRAELETPLYPVDLRQTFVAAWELLAMRHQSRQGALSLPTDTVWVSGDEV RIQQVLVNVLANALDACSHDAAIAVTWQTQGEALEVYIADNGPGWPGALLPSLLKPFTTSKAVGLGIGLSISVSLMAQMK GDLRLASTLTRNACVVLQFSVTDVDDVE
Specific function: Member of the two-component regulatory system pgtB/pgtA that regulates the inducible phosphoglycerate transport system. Activates pgtA by phosphorylation [H]
COG id: COG4192
COG function: function code T; Signal transduction histidine kinase regulating phosphoglycerate transport system
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=230, Percent_Identity=27.8260869565217, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1788549, Length=242, Percent_Identity=28.5123966942149, Blast_Score=74, Evalue=4e-14, Organism=Escherichia coli, GI87081816, Length=335, Percent_Identity=25.6716417910448, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR017116 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 75365; Mature: 75365
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGRLLQRLRQLSISNSLRGAFLTGALLTLIVSMVSLYSWHEQSSQVRYSLDEYFPRIHS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFLIEGNLNLAVDQLNEFLLAPNTTVRLQLRTQIIQHLDKIERLSQGLQLAERRQLAVIL EEEEECCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE QDSRTLLAELDNALYNMFLVREKVSELSARIDWLHDDFTTELNSLVQDFTWQQGTLLDQI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH EANQGDAAQYLQRSREVQNEQQQVYTLARIENQIVDDLRDRLNELKSGNNDGMLVETHIR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHH YLENLKKTADENIRALDDWPSTITLRQTIDELLEIGMVKNKMPDTMRDYVAAQKALLDAS HHHHHHHHHCCCCEECCCCCCCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RAREATLGRFRTLLEAQLGSSHQQMQTFNQRLEQIVRVSGGLILVTTLLALLLAWGLNHY HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHH FIRSRLVKRFTALNQAVVQIGLGRTDSTIPVYGRDELGRIARLLRHTLGQLNMQRRQLEQ HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EVAERKEIEADLRAMQDELIQTAKLAVVGQTMTTLAHEINQPLNALSMYLFTAGRAIEQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC QSGQARNTLTKAEGLINRIDAIIRSLRQFTRRAELETPLYPVDLRQTFVAAWELLAMRHQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH SRQGALSLPTDTVWVSGDEVRIQQVLVNVLANALDACSHDAAIAVTWQTQGEALEVYIAD CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEC NGPGWPGALLPSLLKPFTTSKAVGLGIGLSISVSLMAQMKGDLRLASTLTRNACVVLQFS CCCCCCHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEE VTDVDDVE CCCCCCCC >Mature Secondary Structure MKGRLLQRLRQLSISNSLRGAFLTGALLTLIVSMVSLYSWHEQSSQVRYSLDEYFPRIHS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFLIEGNLNLAVDQLNEFLLAPNTTVRLQLRTQIIQHLDKIERLSQGLQLAERRQLAVIL EEEEECCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE QDSRTLLAELDNALYNMFLVREKVSELSARIDWLHDDFTTELNSLVQDFTWQQGTLLDQI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH EANQGDAAQYLQRSREVQNEQQQVYTLARIENQIVDDLRDRLNELKSGNNDGMLVETHIR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHH YLENLKKTADENIRALDDWPSTITLRQTIDELLEIGMVKNKMPDTMRDYVAAQKALLDAS HHHHHHHHHCCCCEECCCCCCCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RAREATLGRFRTLLEAQLGSSHQQMQTFNQRLEQIVRVSGGLILVTTLLALLLAWGLNHY HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHH FIRSRLVKRFTALNQAVVQIGLGRTDSTIPVYGRDELGRIARLLRHTLGQLNMQRRQLEQ HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EVAERKEIEADLRAMQDELIQTAKLAVVGQTMTTLAHEINQPLNALSMYLFTAGRAIEQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC QSGQARNTLTKAEGLINRIDAIIRSLRQFTRRAELETPLYPVDLRQTFVAAWELLAMRHQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH SRQGALSLPTDTVWVSGDEVRIQQVLVNVLANALDACSHDAAIAVTWQTQGEALEVYIAD CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEC NGPGWPGALLPSLLKPFTTSKAVGLGIGLSISVSLMAQMKGDLRLASTLTRNACVVLQFS CCCCCCHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEE VTDVDDVE CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2842311; 11677609; 2842312 [H]