Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is pgtC
Identifier: 29140981
GI number: 29140981
Start: 533081
End: 534274
Strand: Direct
Name: pgtC
Synonym: t0460
Alternate gene names: 29140981
Gene position: 533081-534274 (Clockwise)
Preceding gene: 29140979
Following gene: 29140982
Centisome position: 11.12
GC content: 53.94
Gene sequence:
>1194_bases ATGTTCGGTTCTTGCCAGGCGTACAGCCGCGAGCTGGTGATGGCAACGACCTTTTCACCCAGCGCGACCGCCTGGATTAT CCAGCGCTGGCAGACGGAGCCGGGTTCCGTCATGATTCGTACGCTCAACCGTACCAGCGGTTCTTTAGAGCAATTACTTG ATACGGCGAATGCGGAAAATGTCGATCTGATCCTGACGTCATCCCCCATGCTGTTGCAACACCTTCAGGAGCACCAAAAG CTGGCGCTATTGGATAGCGCGCCTGCCGCCAGCCAGAAGCTGGTGCCGCGTTCTATCCGCTCAACTTCAGTGGCGGTAGC GGTATCCGGATTTGGGCTATTGATCAACCGTTCAGCGCTCGCTGCGCGCCATCTTCCGCCGCCTGCCGACTGGCAGGATA TGGGCCTGCCCAGTTACCAGGGCGCTCTATTAATGAGCAGTCCGTCACGCTCAGACACCAATCATTTGATGGTGGAGTCG CTGTTGCAGCAAAAAGGCTGGACGGCAGGGTGGGCGACGCTGCTGGCAATCTCGGGTAATTTGGTCACGATTTCCTCTCG CAGTTTCGGCGTAGCGGATAAAATCAAAAGCGGGCTTGGCGTTGCCGGGCCGGTCATTGATAACTATGCTAATTTGCTAC TCAACGATCCTAATCTTGCTTTTACCTATTTTCCGTATTCTGCGGTGTCGCCCACTTACGTCGCGGTGTTGAAAAACAGC CGTCATGCAGACGAAGCGCGTGCTTTTATTCATTACTTATTAAGTCCGAAAGGGCAAAGGATACTGGCTGACGCGAATAC CGGTAAGTATCCCGTCGCACCGCTTAGCGCCGATAATCCTCGCGCCGCGCAACAACAGCGTTTGATGGCCCAGCCGCCGT TGAACTATCGTCTGATCCTGAAGCGTCAGCAACTGGTACAACGCATGTTTGATACCGCGATCAGTTTTCGTCTTGCGCAG CTTAAAGATGCATGGCGAGCGTTGCACAGCGCAGAAACGCGGCTTAAACGCCCCTTACCTGAAATCAGAGCCTTATTGAC CAGCGTCCCGGTGGATGCGGCAAGCAGCGAAGATGAAACCTGGCTGGCGCAGTTTGATAATAAAAGCTTTGCCGAACAAA AAATGATGGAGTGGCAGATCTGGTTTCTGAACAATCAGCGGCTGGCGATTCACAAACTGGAAGAGCTGAAATGA
Upstream 100 bases:
>100_bases TTATGTGATATCGATATTTATGAACGGGATCACAAATCGACTTTTCTCATACTGTGGTTGTTTCGCCAGAGTGGGCGCTT TTACGCTATGGCTGGCGGCG
Downstream 100 bases:
>100_bases AGGGGAGATTATTGCAACGGCTTCGTCAGCTCAGTATCAGCAACAGTTTACGGGGTGCATTTTTAACGGGCGCATTACTG ACGCTGATTGTCAGTATGGT
Product: phosphoglycerate transport regulatory protein PgtC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MFGSCQAYSRELVMATTFSPSATAWIIQRWQTEPGSVMIRTLNRTSGSLEQLLDTANAENVDLILTSSPMLLQHLQEHQK LALLDSAPAASQKLVPRSIRSTSVAVAVSGFGLLINRSALAARHLPPPADWQDMGLPSYQGALLMSSPSRSDTNHLMVES LLQQKGWTAGWATLLAISGNLVTISSRSFGVADKIKSGLGVAGPVIDNYANLLLNDPNLAFTYFPYSAVSPTYVAVLKNS RHADEARAFIHYLLSPKGQRILADANTGKYPVAPLSADNPRAAQQQRLMAQPPLNYRLILKRQQLVQRMFDTAISFRLAQ LKDAWRALHSAETRLKRPLPEIRALLTSVPVDAASSEDETWLAQFDNKSFAEQKMMEWQIWFLNNQRLAIHKLEELK
Sequences:
>Translated_397_residues MFGSCQAYSRELVMATTFSPSATAWIIQRWQTEPGSVMIRTLNRTSGSLEQLLDTANAENVDLILTSSPMLLQHLQEHQK LALLDSAPAASQKLVPRSIRSTSVAVAVSGFGLLINRSALAARHLPPPADWQDMGLPSYQGALLMSSPSRSDTNHLMVES LLQQKGWTAGWATLLAISGNLVTISSRSFGVADKIKSGLGVAGPVIDNYANLLLNDPNLAFTYFPYSAVSPTYVAVLKNS RHADEARAFIHYLLSPKGQRILADANTGKYPVAPLSADNPRAAQQQRLMAQPPLNYRLILKRQQLVQRMFDTAISFRLAQ LKDAWRALHSAETRLKRPLPEIRALLTSVPVDAASSEDETWLAQFDNKSFAEQKMMEWQIWFLNNQRLAIHKLEELK >Mature_397_residues MFGSCQAYSRELVMATTFSPSATAWIIQRWQTEPGSVMIRTLNRTSGSLEQLLDTANAENVDLILTSSPMLLQHLQEHQK LALLDSAPAASQKLVPRSIRSTSVAVAVSGFGLLINRSALAARHLPPPADWQDMGLPSYQGALLMSSPSRSDTNHLMVES LLQQKGWTAGWATLLAISGNLVTISSRSFGVADKIKSGLGVAGPVIDNYANLLLNDPNLAFTYFPYSAVSPTYVAVLKNS RHADEARAFIHYLLSPKGQRILADANTGKYPVAPLSADNPRAAQQQRLMAQPPLNYRLILKRQQLVQRMFDTAISFRLAQ LKDAWRALHSAETRLKRPLPEIRALLTSVPVDAASSEDETWLAQFDNKSFAEQKMMEWQIWFLNNQRLAIHKLEELK
Specific function: Required for pgtP expression, it may act jointly with the pgtA/pgtB signaling proteins
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PGTC_SALTI (P0A234)
Other databases:
- EMBL: AL627274 - EMBL: AE014613 - RefSeq: NP_456940.1 - RefSeq: NP_804323.1 - ProteinModelPortal: P0A234 - PRIDE: P0A234 - GeneID: 1069374 - GeneID: 1248958 - GenomeReviews: AE014613_GR - GenomeReviews: AL513382_GR - KEGG: stt:t0460 - KEGG: sty:STY2635 - HOGENOM: HBG297127 - OMA: LLLNDPH - ProtClustDB: CLSK870492 - BioCyc: SENT209261:T0460-MONOMER - BioCyc: SENT220341:STY2635-MONOMER - InterPro: IPR006059
Pfam domain/function: PF01547 SBP_bac_1
EC number: NA
Molecular weight: Translated: 44016; Mature: 44016
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xbd4ce68)-;
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGSCQAYSRELVMATTFSPSATAWIIQRWQTEPGSVMIRTLNRTSGSLEQLLDTANAEN CCCCCCHHCCCEEEEEECCCCHHEEHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCC VDLILTSSPMLLQHLQEHQKLALLDSAPAASQKLVPRSIRSTSVAVAVSGFGLLINRSAL EEEEEECCHHHHHHHHHHHHEEEECCCCCCHHHHCHHHHCCCEEEEEEECCCCEEECHHH AARHLPPPADWQDMGLPSYQGALLMSSPSRSDTNHLMVESLLQQKGWTAGWATLLAISGN HHCCCCCCCCHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHEEECCC LVTISSRSFGVADKIKSGLGVAGPVIDNYANLLLNDPNLAFTYFPYSAVSPTYVAVLKNS EEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHEECCCCEEEEECCCCCCCCEEEEEECCC RHADEARAFIHYLLSPKGQRILADANTGKYPVAPLSADNPRAAQQQRLMAQPPLNYRLIL CCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEHH KRQQLVQRMFDTAISFRLAQLKDAWRALHSAETRLKRPLPEIRALLTSVPVDAASSEDET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCH WLAQFDNKSFAEQKMMEWQIWFLNNQRLAIHKLEELK HHHHCCCCHHHHHHHHEEEEEEECCCEEEEHHHHHCH >Mature Secondary Structure MFGSCQAYSRELVMATTFSPSATAWIIQRWQTEPGSVMIRTLNRTSGSLEQLLDTANAEN CCCCCCHHCCCEEEEEECCCCHHEEHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCC VDLILTSSPMLLQHLQEHQKLALLDSAPAASQKLVPRSIRSTSVAVAVSGFGLLINRSAL EEEEEECCHHHHHHHHHHHHEEEECCCCCCHHHHCHHHHCCCEEEEEEECCCCEEECHHH AARHLPPPADWQDMGLPSYQGALLMSSPSRSDTNHLMVESLLQQKGWTAGWATLLAISGN HHCCCCCCCCHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHEEECCC LVTISSRSFGVADKIKSGLGVAGPVIDNYANLLLNDPNLAFTYFPYSAVSPTYVAVLKNS EEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHEECCCCEEEEECCCCCCCCEEEEEECCC RHADEARAFIHYLLSPKGQRILADANTGKYPVAPLSADNPRAAQQQRLMAQPPLNYRLIL CCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEHH KRQQLVQRMFDTAISFRLAQLKDAWRALHSAETRLKRPLPEIRALLTSVPVDAASSEDET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCH WLAQFDNKSFAEQKMMEWQIWFLNNQRLAIHKLEELK HHHHCCCCHHHHHHHHEEEEEEECCCEEEEHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504