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The map label for this gene is ypfL [H]

Identifier: 29140932

GI number: 29140932

Start: 480637

End: 481914

Strand: Reverse

Name: ypfL [H]

Synonym: t0405

Alternate gene names: 29140932

Gene position: 481914-480637 (Counterclockwise)

Preceding gene: 29140933

Following gene: 29140913

Centisome position: 10.06

GC content: 52.9

Gene sequence:

>1278_bases
ATGGACGAGCGTATTCCTTGTAAAAACCCGCAATGCTCACATTTCATCCTGCCAGCAACGGCTGCCCGCACGGAGGGCTA
TTGCATGCCCTGCGTCCAGGCGCGCTATCGGCAAGAGCAGGAAGAATATATCCGGAAAAACAGAAAAACGATCGACGCGT
TCAGTGGCATTACCAACCCTGTTGAAATGCTTAAACTCGTTCATGAACCCCGGGAACACGATCCGTTAATCGAGTGGATT
CCCTGCCCCATTCCGACCGATGAGCTTTACAAAAAGCTCTCCGATGATGAAAGCCGCGACATGGTCGATTATGCAGAAGA
ATTATTTGATTCCGGATGGCAGGAGGAAGCTCAGGAAATTGCGCTGTGCCTGGCGGCATTTACCCAGGCCAATCTGGATA
ATTTCCTGCGCCAAGTAATAAATGAAGAGGAACTGGAGCTCTCTTCACCCCTACCTTTTCACCGTGCGCCGCCTGACGTA
CGCGACGCGCTTTTGCAGAAGGTTGAAACCGATGACGAAAACCGTGATGGCATTCTTTGCGCCCTGGCCTGGATTGGCGA
TGAGGTTGTCGTTGAGCATTTTAACCGCTGGCGCCAGGAACCACCTGCGTGGAGTGCTTCACTTCATATCCTCCCTCATC
GCTATGCTCACCAGGCGGGATGGGAGCTCACTGAAAATGGCCGCAGGCGCGATCTTTACTTTACGCAATGTACCCATCTG
GTAAAACAGGCACCTGAACAGCCGGCCGTTTTTCGCGCCGTTGCAGAATATGGTGAAAACTGCCCACACTGTTCCCTGCC
GCTAATCAATCTGTTTGAGGTTGCGCCGAGCGCCGTCGGCCTAAGCACGCAGGGTTGGCCCGGTCAAATTCGTATTCTGA
CCTGTCAGTGTTGTACGGCATATAACACCGTTTTCGCCACCGTCGATCCACAAGGCCAGCCGCGATGGTACGAAAAAAAT
GCGCTCTCGACGCTGGCGGTGGAGAATTCCTCTGACTGGATAACGCTACCGCTTGATGTTCTGCACCCCGGGGAATCCCG
TTTGCCGCTATTCGCTGCTGAAATATTTTTACCCACCACCTTCTCACAGCTCGGCGGCCATCCCGCATGGGTTCAGGATA
CAGACTATCCCACGTGCCCAACGTGCGCGCAAACGATGATGTTTCTTGCGCAGCTAAGCTATGAAGATATCGAGGAAGAG
GAATATGCGGAAGGAATGCTTTACGGGTTTATCTGCCCCTCCTGCCAAACAACGGCAACGTCTTATCAGCAAACATAA

Upstream 100 bases:

>100_bases
GTTCATTGTAGATAAAGAATTCGGATAACCGCCCGCTGCCGTTATCATTAGTAAAACAGTACAGTAAACACTCGTAGAAT
TTGCAGTGGAGCACTACCGC

Downstream 100 bases:

>100_bases
ACGCTCATCCTCATGATCTGATGACAAAACTGTTTTGCACGTTGTGCGCGCGCTTCCCCGGAGGCGGCGCTGGCGCGCCT
TGTCCGGGCTACCAACCACA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF79 [H]

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MDERIPCKNPQCSHFILPATAARTEGYCMPCVQARYRQEQEEYIRKNRKTIDAFSGITNPVEMLKLVHEPREHDPLIEWI
PCPIPTDELYKKLSDDESRDMVDYAEELFDSGWQEEAQEIALCLAAFTQANLDNFLRQVINEEELELSSPLPFHRAPPDV
RDALLQKVETDDENRDGILCALAWIGDEVVVEHFNRWRQEPPAWSASLHILPHRYAHQAGWELTENGRRRDLYFTQCTHL
VKQAPEQPAVFRAVAEYGENCPHCSLPLINLFEVAPSAVGLSTQGWPGQIRILTCQCCTAYNTVFATVDPQGQPRWYEKN
ALSTLAVENSSDWITLPLDVLHPGESRLPLFAAEIFLPTTFSQLGGHPAWVQDTDYPTCPTCAQTMMFLAQLSYEDIEEE
EYAEGMLYGFICPSCQTTATSYQQT

Sequences:

>Translated_425_residues
MDERIPCKNPQCSHFILPATAARTEGYCMPCVQARYRQEQEEYIRKNRKTIDAFSGITNPVEMLKLVHEPREHDPLIEWI
PCPIPTDELYKKLSDDESRDMVDYAEELFDSGWQEEAQEIALCLAAFTQANLDNFLRQVINEEELELSSPLPFHRAPPDV
RDALLQKVETDDENRDGILCALAWIGDEVVVEHFNRWRQEPPAWSASLHILPHRYAHQAGWELTENGRRRDLYFTQCTHL
VKQAPEQPAVFRAVAEYGENCPHCSLPLINLFEVAPSAVGLSTQGWPGQIRILTCQCCTAYNTVFATVDPQGQPRWYEKN
ALSTLAVENSSDWITLPLDVLHPGESRLPLFAAEIFLPTTFSQLGGHPAWVQDTDYPTCPTCAQTMMFLAQLSYEDIEEE
EYAEGMLYGFICPSCQTTATSYQQT
>Mature_425_residues
MDERIPCKNPQCSHFILPATAARTEGYCMPCVQARYRQEQEEYIRKNRKTIDAFSGITNPVEMLKLVHEPREHDPLIEWI
PCPIPTDELYKKLSDDESRDMVDYAEELFDSGWQEEAQEIALCLAAFTQANLDNFLRQVINEEELELSSPLPFHRAPPDV
RDALLQKVETDDENRDGILCALAWIGDEVVVEHFNRWRQEPPAWSASLHILPHRYAHQAGWELTENGRRRDLYFTQCTHL
VKQAPEQPAVFRAVAEYGENCPHCSLPLINLFEVAPSAVGLSTQGWPGQIRILTCQCCTAYNTVFATVDPQGQPRWYEKN
ALSTLAVENSSDWITLPLDVLHPGESRLPLFAAEIFLPTTFSQLGGHPAWVQDTDYPTCPTCAQTMMFLAQLSYEDIEEE
EYAEGMLYGFICPSCQTTATSYQQT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48437; Mature: 48437

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDERIPCKNPQCSHFILPATAARTEGYCMPCVQARYRQEQEEYIRKNRKTIDAFSGITNP
CCCCCCCCCCCCCEEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCH
VEMLKLVHEPREHDPLIEWIPCPIPTDELYKKLSDDESRDMVDYAEELFDSGWQEEAQEI
HHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHH
ALCLAAFTQANLDNFLRQVINEEELELSSPLPFHRAPPDVRDALLQKVETDDENRDGILC
HHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEE
ALAWIGDEVVVEHFNRWRQEPPAWSASLHILPHRYAHQAGWELTENGRRRDLYFTQCTHL
EHHHHCHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHHH
VKQAPEQPAVFRAVAEYGENCPHCSLPLINLFEVAPSAVGLSTQGWPGQIRILTCQCCTA
HHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHCCCCCCCCCCEEEEEEEEEHHH
YNTVFATVDPQGQPRWYEKNALSTLAVENSSDWITLPLDVLHPGESRLPLFAAEIFLPTT
CCEEEEEECCCCCCCCCHHCCCEEEEEECCCCEEEEEHHHCCCCCCCCCCEEHHHHHCCC
FSQLGGHPAWVQDTDYPTCPTCAQTMMFLAQLSYEDIEEEEYAEGMLYGFICPSCQTTAT
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCCCCCCCC
SYQQT
CCCCC
>Mature Secondary Structure
MDERIPCKNPQCSHFILPATAARTEGYCMPCVQARYRQEQEEYIRKNRKTIDAFSGITNP
CCCCCCCCCCCCCEEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCH
VEMLKLVHEPREHDPLIEWIPCPIPTDELYKKLSDDESRDMVDYAEELFDSGWQEEAQEI
HHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHH
ALCLAAFTQANLDNFLRQVINEEELELSSPLPFHRAPPDVRDALLQKVETDDENRDGILC
HHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEE
ALAWIGDEVVVEHFNRWRQEPPAWSASLHILPHRYAHQAGWELTENGRRRDLYFTQCTHL
EHHHHCHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHHH
VKQAPEQPAVFRAVAEYGENCPHCSLPLINLFEVAPSAVGLSTQGWPGQIRILTCQCCTA
HHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHCCCCCCCCCCEEEEEEEEEHHH
YNTVFATVDPQGQPRWYEKNALSTLAVENSSDWITLPLDVLHPGESRLPLFAAEIFLPTT
CCEEEEEECCCCCCCCCHHCCCEEEEEECCCCEEEEEHHHCCCCCCCCCCEEHHHHHCCC
FSQLGGHPAWVQDTDYPTCPTCAQTMMFLAQLSYEDIEEEEYAEGMLYGFICPSCQTTAT
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCCCCCCCC
SYQQT
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10464203; 11677609 [H]