Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is talA [H]
Identifier: 29140913
GI number: 29140913
Start: 461026
End: 461976
Strand: Reverse
Name: talA [H]
Synonym: t0386
Alternate gene names: 29140913
Gene position: 461976-461026 (Counterclockwise)
Preceding gene: 29140932
Following gene: 29140912
Centisome position: 9.64
GC content: 53.0
Gene sequence:
>951_bases ATGAACCAGCTAGACGGCATCAAACAATTCACTACCGTCGTCGCCGACAGCGGCGACATCGAGTCCATCCGCCACTACCA GCCGCAGGATGCCACGACAAATCCCTCTTTACTGTTAAAAGCCGCCGGGCTTGAGCAGTATGGTCATTTGATTGAGGATG CGATTGCCTGGGGAAAAAAACACGGCGGTACGCAGGAACAGCAGGTTGCGGCAGCCAGCGATAAACTGGCGGTTAATTTT GGCGCGGAAATACTGAAAAGTATTCCCGGTCGCGTCTCCACTGAAGTCGACGTGCGGTTATCGTTCGATAAAGAAAAAAG TATCGAGAAAGCACGCCATCTGGTGGATCTCTACCAGCAGCAGGATGTTGATAAATCACGCATTCTGATCAAGCTCGCCG CGACCTGGGAAGGTATTCGCGCCGCCGAACAGCTCGAAAAAGAAGGCATTAATTGCAACCTGACGTTGTTGTTCTCTTTT GCCCAGGCGCGCGCCTGCGCCGAAGCGGGCGTCTATTTAATCTCTCCGTTCGTGGGCCGAATTTACGACTGGTATCAGGC GCGTAGTCCGCTGGAGCCGTATGTCGTGGAGGAAGATCCCGGCGTGAAATCGGTACGCAATATCTACGATTACTTTAAAC AGCATCGCTATGAAACCATCGTGATGGGTGCAAGTTTCCGCCGTACTGAGCAAATCCTCGCGCTAACCGGCTGCGATCGA CTGACTATCTCCCCTAACCTGCTTAAAGAGCTGAAAGAAAAAGAAGAACCGGTGATCCGTAAACTGGTGCCTTCCTCGCA GATGTTCCACCGTCCTACGCCAATGACGGAAGCGGAGTTCCGCTGGGAACATAATCAGGACGCGATGGCCGTAGAGAAGC TGTCGGAAGGTATCCGCCTTTTCGCCGTTGACCAGCGCAAACTGGAAGACCTGCTTGCCGCCAAACTATAA
Upstream 100 bases:
>100_bases TGCCTGTCTGCTATGCTTTTTGGTTATGTAGTGTATCAATCTTTCAGAAGTGTGAATCAACACACTCATCTAACACTTTA CTTTTCAAGGAGTATTTCCT
Downstream 100 bases:
>100_bases ACCTTGCATGGAGTGATTTATGTCCCGTAAAGACCTTGCCAATGCGATTCGTGCGCTGAGCATGGATGCCGTTCAAAAAG CCAATTCCGGGCACCCCGGC
Product: transaldolase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MNQLDGIKQFTTVVADSGDIESIRHYQPQDATTNPSLLLKAAGLEQYGHLIEDAIAWGKKHGGTQEQQVAAASDKLAVNF GAEILKSIPGRVSTEVDVRLSFDKEKSIEKARHLVDLYQQQDVDKSRILIKLAATWEGIRAAEQLEKEGINCNLTLLFSF AQARACAEAGVYLISPFVGRIYDWYQARSPLEPYVVEEDPGVKSVRNIYDYFKQHRYETIVMGASFRRTEQILALTGCDR LTISPNLLKELKEKEEPVIRKLVPSSQMFHRPTPMTEAEFRWEHNQDAMAVEKLSEGIRLFAVDQRKLEDLLAAKL
Sequences:
>Translated_316_residues MNQLDGIKQFTTVVADSGDIESIRHYQPQDATTNPSLLLKAAGLEQYGHLIEDAIAWGKKHGGTQEQQVAAASDKLAVNF GAEILKSIPGRVSTEVDVRLSFDKEKSIEKARHLVDLYQQQDVDKSRILIKLAATWEGIRAAEQLEKEGINCNLTLLFSF AQARACAEAGVYLISPFVGRIYDWYQARSPLEPYVVEEDPGVKSVRNIYDYFKQHRYETIVMGASFRRTEQILALTGCDR LTISPNLLKELKEKEEPVIRKLVPSSQMFHRPTPMTEAEFRWEHNQDAMAVEKLSEGIRLFAVDQRKLEDLLAAKL >Mature_316_residues MNQLDGIKQFTTVVADSGDIESIRHYQPQDATTNPSLLLKAAGLEQYGHLIEDAIAWGKKHGGTQEQQVAAASDKLAVNF GAEILKSIPGRVSTEVDVRLSFDKEKSIEKARHLVDLYQQQDVDKSRILIKLAATWEGIRAAEQLEKEGINCNLTLLFSF AQARACAEAGVYLISPFVGRIYDWYQARSPLEPYVVEEDPGVKSVRNIYDYFKQHRYETIVMGASFRRTEQILALTGCDR LTISPNLLKELKEKEEPVIRKLVPSSQMFHRPTPMTEAEFRWEHNQDAMAVEKLSEGIRLFAVDQRKLEDLLAAKL
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transaldolase family. Type 1 subfamily [H]
Homologues:
Organism=Homo sapiens, GI5803187, Length=317, Percent_Identity=58.9905362776025, Blast_Score=367, Evalue=1e-102, Organism=Escherichia coli, GI1788807, Length=316, Percent_Identity=89.5569620253165, Blast_Score=593, Evalue=1e-171, Organism=Escherichia coli, GI1786189, Length=312, Percent_Identity=62.5, Blast_Score=414, Evalue=1e-117, Organism=Caenorhabditis elegans, GI25153750, Length=319, Percent_Identity=53.2915360501567, Blast_Score=340, Evalue=4e-94, Organism=Caenorhabditis elegans, GI25153752, Length=165, Percent_Identity=52.1212121212121, Blast_Score=170, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17570473, Length=97, Percent_Identity=50.5154639175258, Blast_Score=88, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6323386, Length=321, Percent_Identity=56.6978193146417, Blast_Score=326, Evalue=4e-90, Organism=Saccharomyces cerevisiae, GI6321480, Length=314, Percent_Identity=52.2292993630573, Blast_Score=322, Evalue=6e-89, Organism=Drosophila melanogaster, GI45549185, Length=319, Percent_Identity=57.6802507836991, Blast_Score=364, Evalue=1e-101,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001585 - InterPro: IPR004730 - InterPro: IPR018225 [H]
Pfam domain/function: PF00923 Transaldolase [H]
EC number: =2.2.1.2 [H]
Molecular weight: Translated: 35750; Mature: 35750
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: PS01054 TRANSALDOLASE_1 ; PS00958 TRANSALDOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQLDGIKQFTTVVADSGDIESIRHYQPQDATTNPSLLLKAAGLEQYGHLIEDAIAWGKK CCCCHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHEEEECCHHHHHHHHHHHHHHHHC HGGTQEQQVAAASDKLAVNFGAEILKSIPGRVSTEVDVRLSFDKEKSIEKARHLVDLYQQ CCCCHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHH QDVDKSRILIKLAATWEGIRAAEQLEKEGINCNLTLLFSFAQARACAEAGVYLISPFVGR CCCCCHHEEEEEEHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHH IYDWYQARSPLEPYVVEEDPGVKSVRNIYDYFKQHRYETIVMGASFRRTEQILALTGCDR HHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHEEECCCC LTISPNLLKELKEKEEPVIRKLVPSSQMFHRPTPMTEAEFRWEHNQDAMAVEKLSEGIRL EEECHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHCCCCCCCHHHHHHHHCCCEE FAVDQRKLEDLLAAKL EEECHHHHHHHHHHCC >Mature Secondary Structure MNQLDGIKQFTTVVADSGDIESIRHYQPQDATTNPSLLLKAAGLEQYGHLIEDAIAWGKK CCCCHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHEEEECCHHHHHHHHHHHHHHHHC HGGTQEQQVAAASDKLAVNFGAEILKSIPGRVSTEVDVRLSFDKEKSIEKARHLVDLYQQ CCCCHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHH QDVDKSRILIKLAATWEGIRAAEQLEKEGINCNLTLLFSFAQARACAEAGVYLISPFVGR CCCCCHHEEEEEEHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHH IYDWYQARSPLEPYVVEEDPGVKSVRNIYDYFKQHRYETIVMGASFRRTEQILALTGCDR HHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHEEECCCC LTISPNLLKELKEKEEPVIRKLVPSSQMFHRPTPMTEAEFRWEHNQDAMAVEKLSEGIRL EEECHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHCCCCCCCHHHHHHHHCCCEE FAVDQRKLEDLLAAKL EEECHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA