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The map label for this gene is yxkH [H]

Identifier: 28378963

GI number: 28378963

Start: 2161732

End: 2162583

Strand: Direct

Name: yxkH [H]

Synonym: lp_2397

Alternate gene names: 28378963

Gene position: 2161732-2162583 (Clockwise)

Preceding gene: 28378958

Following gene: 28379006

Centisome position: 65.34

GC content: 45.19

Gene sequence:

>852_bases
ATGCACATGCGGGGTATCAACTTTGTATTAGGTCTCGGCGTCGCGCTCGGCCTGTTAGCAGGCTGTCAGGCGGCTTCACC
GGCAACTAAACAAGCCAGCAGTCAATCATCTAAGACTAGCGCTAAAAGCGTTCACAGCTCGGCTAAACACCAAGCACAAG
CACGGCCTTATCAACATTGGCATACCGTCAAAGATGTTCACTTGCCTATTTTGATGTATCACAGTATTTCTAGCGGGAAC
CAGTTACGTGTCCCCGCCAAAGAATTTCAAACTGAAATGACTTATCTAAAGGCACACGGCTACCGAACGCTGACTGCCAA
TGAAGCCGTATACGCGCTCAAACATCGGCGAATTCCACAAAAGAAGATTGTCTGGATCACACTCGACGATAGCTATAAAG
ATAACATGACAGCAGCTTGGCCAATTTTGAAACAGACGCACCAACACGCCACCATTAATTTTATTACCGGCTTTACCCAT
AAGAAAAACCACTTAACTTTAGCTGATGCTAAGCGGATGCAAGCATCCGGTAATATTGATTTTCAAAGTCACACCGTTCG
CCATCTGGATTTAAATAATTTAACTTACCAGGTTCAACTTACGGAATTATCAAGTTCCAAAAAATGGCTCGATCATAATT
TACAACAGAACACACAAGTTATTTGTTACCCAGCCGGCCGTGCTAATCAGCAGACCATTAAAGCCGATAAACAGGCTGGC
TATCAGTATGCCCTATCAACGGCACCTGGCATCGCCACCAGCACACAGAACCCATACAATCTCACTCGACAACGGGTCGT
ACCTGGAATGTCGCTAACGGCCTTTCAGACACTATTAACGAGTAATAATTAA

Upstream 100 bases:

>100_bases
CATTAAGGAAATTATTTTAACAATACTTCAATAATTATCGCGCTTTACATGCTATTCTATTAGAATAGGAAGTAGTTTTT
AAATCATGGGGGGATTTATC

Downstream 100 bases:

>100_bases
TTCATAGGACCCTTACTTGTGACACGATCCCAAAACCCTTTTTTATGAGCGCTTAACAGTGCTGTTGTGATCACAACAGC
CAAAACGCAAAATTGGGGGT

Product: prophage Lp2 protein 59; xylanase/chitin deacetylase (putative)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MHMRGINFVLGLGVALGLLAGCQAASPATKQASSQSSKTSAKSVHSSAKHQAQARPYQHWHTVKDVHLPILMYHSISSGN
QLRVPAKEFQTEMTYLKAHGYRTLTANEAVYALKHRRIPQKKIVWITLDDSYKDNMTAAWPILKQTHQHATINFITGFTH
KKNHLTLADAKRMQASGNIDFQSHTVRHLDLNNLTYQVQLTELSSSKKWLDHNLQQNTQVICYPAGRANQQTIKADKQAG
YQYALSTAPGIATSTQNPYNLTRQRVVPGMSLTAFQTLLTSNN

Sequences:

>Translated_283_residues
MHMRGINFVLGLGVALGLLAGCQAASPATKQASSQSSKTSAKSVHSSAKHQAQARPYQHWHTVKDVHLPILMYHSISSGN
QLRVPAKEFQTEMTYLKAHGYRTLTANEAVYALKHRRIPQKKIVWITLDDSYKDNMTAAWPILKQTHQHATINFITGFTH
KKNHLTLADAKRMQASGNIDFQSHTVRHLDLNNLTYQVQLTELSSSKKWLDHNLQQNTQVICYPAGRANQQTIKADKQAG
YQYALSTAPGIATSTQNPYNLTRQRVVPGMSLTAFQTLLTSNN
>Mature_283_residues
MHMRGINFVLGLGVALGLLAGCQAASPATKQASSQSSKTSAKSVHSSAKHQAQARPYQHWHTVKDVHLPILMYHSISSGN
QLRVPAKEFQTEMTYLKAHGYRTLTANEAVYALKHRRIPQKKIVWITLDDSYKDNMTAAWPILKQTHQHATINFITGFTH
KKNHLTLADAKRMQASGNIDFQSHTVRHLDLNNLTYQVQLTELSSSKKWLDHNLQQNTQVICYPAGRANQQTIKADKQAG
YQYALSTAPGIATSTQNPYNLTRQRVVPGMSLTAFQTLLTSNN

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 31628; Mature: 31628

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHMRGINFVLGLGVALGLLAGCQAASPATKQASSQSSKTSAKSVHSSAKHQAQARPYQHW
CCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHH
HTVKDVHLPILMYHSISSGNQLRVPAKEFQTEMTYLKAHGYRTLTANEAVYALKHRRIPQ
CCHHHCCEEEEEEEECCCCCEEECCHHHHHHHHHHHHHCCEEEEECCHHHHHHHHCCCCC
KKIVWITLDDSYKDNMTAAWPILKQTHQHATINFITGFTHKKNHLTLADAKRMQASGNID
CEEEEEEECCCCCCCCEEHHHHHHHCCCCEEEEEEECCCCCCCEEEEHHHHHHHCCCCCC
FQSHTVRHLDLNNLTYQVQLTELSSSKKWLDHNLQQNTQVICYPAGRANQQTIKADKQAG
CCCCEEEEEECCCEEEEEEEEECCCCHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHCC
YQYALSTAPGIATSTQNPYNLTRQRVVPGMSLTAFQTLLTSNN
EEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MHMRGINFVLGLGVALGLLAGCQAASPATKQASSQSSKTSAKSVHSSAKHQAQARPYQHW
CCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHH
HTVKDVHLPILMYHSISSGNQLRVPAKEFQTEMTYLKAHGYRTLTANEAVYALKHRRIPQ
CCHHHCCEEEEEEEECCCCCEEECCHHHHHHHHHHHHHCCEEEEECCHHHHHHHHCCCCC
KKIVWITLDDSYKDNMTAAWPILKQTHQHATINFITGFTHKKNHLTLADAKRMQASGNID
CEEEEEEECCCCCCCCEEHHHHHHHCCCCEEEEEEECCCCCCCEEEEHHHHHHHCCCCCC
FQSHTVRHLDLNNLTYQVQLTELSSSKKWLDHNLQQNTQVICYPAGRANQQTIKADKQAG
CCCCEEEEEECCCEEEEEEEEECCCCHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHCC
YQYALSTAPGIATSTQNPYNLTRQRVVPGMSLTAFQTLLTSNN
EEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]