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The map label for this gene is ytsP [H]

Identifier: 28378910

GI number: 28378910

Start: 2107392

End: 2107853

Strand: Direct

Name: ytsP [H]

Synonym: lp_2330

Alternate gene names: 28378910

Gene position: 2107392-2107853 (Clockwise)

Preceding gene: 28378893

Following gene: 28378911

Centisome position: 63.7

GC content: 49.57

Gene sequence:

>462_bases
ATGGCTACCACGGAAACATCACTTATGAACCAACAACTCGACGCCCTACTGTTTCAAGAAACTAACCTGGTCGCGAACTT
AGCTAATGCTAGTGCCCTCCTCAACAGTACTTATGACAACCTTAACTGGGCCGGCTTTTACTTATTTAACGAACAAACTG
GCGAGCTCGACTTAGGTCCCTTCCAAGGCAAAGTCGCTTGCATGCACATCAAAGTTGGGGCTGGTGTCGTCGGAACTGCT
TTTGAAACGCAAACGAACCAACGGGTAGCCGATGTCCATCAATTCCCCGGCCACATCGCTTGTGACAGCGCCAGCAACTC
TGAGATCGTGGTCCCAATCACCAAGGACGGCCACCAAATCGGCGTACTCGACGTCGACTCTCCATCATTAGACCGATTCA
ATGCTGATAACGAAGCTGAATTGACCGAATTTGTGGCGATTCTGACGTCACACATTGACTAA

Upstream 100 bases:

>100_bases
GCTTTTTTCTGAAAATCCAATTAAAATCTATCTTAAATTATAACATAGACGTAACTAACGGACAGTAACAATTTGTTAAC
ATTCAAGGAGGATTTTTTAC

Downstream 100 bases:

>100_bases
TCAGCATTAAACGTGTTATGCTACTCTTTGTGTAAAATAATGCAGCAGTGAGTGGGTAAGCTCGTCAACAGATTGGTGCC
AATATTTTGGTCAGTTAGTA

Product: signal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MATTETSLMNQQLDALLFQETNLVANLANASALLNSTYDNLNWAGFYLFNEQTGELDLGPFQGKVACMHIKVGAGVVGTA
FETQTNQRVADVHQFPGHIACDSASNSEIVVPITKDGHQIGVLDVDSPSLDRFNADNEAELTEFVAILTSHID

Sequences:

>Translated_153_residues
MATTETSLMNQQLDALLFQETNLVANLANASALLNSTYDNLNWAGFYLFNEQTGELDLGPFQGKVACMHIKVGAGVVGTA
FETQTNQRVADVHQFPGHIACDSASNSEIVVPITKDGHQIGVLDVDSPSLDRFNADNEAELTEFVAILTSHID
>Mature_152_residues
ATTETSLMNQQLDALLFQETNLVANLANASALLNSTYDNLNWAGFYLFNEQTGELDLGPFQGKVACMHIKVGAGVVGTAF
ETQTNQRVADVHQFPGHIACDSASNSEIVVPITKDGHQIGVLDVDSPSLDRFNADNEAELTEFVAILTSHID

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=140, Percent_Identity=52.1428571428571, Blast_Score=144, Evalue=3e-36,
Organism=Saccharomyces cerevisiae, GI6322781, Length=135, Percent_Identity=45.1851851851852, Blast_Score=115, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 16526; Mature: 16395

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: PS01320 UPF0067

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTETSLMNQQLDALLFQETNLVANLANASALLNSTYDNLNWAGFYLFNEQTGELDLGP
CCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCEEEEEEECCCCCCEECCC
FQGKVACMHIKVGAGVVGTAFETQTNQRVADVHQFPGHIACDSASNSEIVVPITKDGHQI
CCCCEEEEEEEECCCEEECEECCCCCCHHHHHHHCCCEEEECCCCCCEEEEEEECCCCEE
GVLDVDSPSLDRFNADNEAELTEFVAILTSHID
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ATTETSLMNQQLDALLFQETNLVANLANASALLNSTYDNLNWAGFYLFNEQTGELDLGP
CCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCEEEEEEECCCCCCEECCC
FQGKVACMHIKVGAGVVGTAFETQTNQRVADVHQFPGHIACDSASNSEIVVPITKDGHQI
CCCCEEEEEEEECCCEEECEECCCCCCHHHHHHHCCCEEEECCCCCCEEEEEEECCCCEE
GVLDVDSPSLDRFNADNEAELTEFVAILTSHID
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]