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The map label for this gene is ywnB [H]

Identifier: 28378811

GI number: 28378811

Start: 1995927

End: 1996574

Strand: Direct

Name: ywnB [H]

Synonym: lp_2212

Alternate gene names: 28378811

Gene position: 1995927-1996574 (Clockwise)

Preceding gene: 28378808

Following gene: 28378812

Centisome position: 60.33

GC content: 51.23

Gene sequence:

>648_bases
ATGAAAATTATGATTATTGGCGCAACCGGAATGGCTGGCTCAGCCATCACCAAACTAGCACTTGAACGGAACCACACCGT
CGTAGCCATCGGACGTTCTGAAGAAAAGCTAGCCGCTCTACCGGCTAACCCAAATTTGCAGACCAAAGCTAAAGACGCTT
TCGATCTCACACTATCTGAGCTACAGGCGGTTGACGTGGTCGTTGACGCAATGGCGACTAGTCCTGATAAGGCTTACCGA
CACGTGGATCTGGCAACTAAGCTGATCGCTCAGCTCCGCGAACAACAGCGGCCACGTCTCCTCTTCATCTTAGGGGCCGG
TAGTTTAACAACTGGTGATGATCAACACCTCTTCGTGCACGACATTGAAAGTAATCCCGCCAATGCTGCCTTCGTCGCTA
TTCCGCAAAACCAACTGGCCGAACTGACCTTCTTACGAACCGTCACCAACGTCGATTGGGTTGGAATTTCCCCGGCCACC
AATTTCACAGCAGGTCCTGCTACCCCGGCCCAGTACGGCCATGACACATTACTGACGAACACTACTGGTGAATCAGTGAC
CAATAGTGGCACGATGGCGGTAGCCGTTTTAAACGAACTGGAAACGCCCAAACATCATCAAGAACGCTTTACAGTCGCTA
ACCAGTAA

Upstream 100 bases:

>100_bases
ACACCAATCTAAACCTGACACGTTGTCATCATGATTCATGCCGGATTAACACGTACAAGGCAGCATTCGGATCATTTTAT
AACTCGAGGAGGAATTATCT

Downstream 100 bases:

>100_bases
ACGTCTTGCCTAGCAGCGCTAAAATATCGAGTGGCAGCCAAACCACAAGCCGAGCGCTACTTGAGCAATTTAGTTAACTG
TGACGCGCTTTAAATAAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MKIMIIGATGMAGSAITKLALERNHTVVAIGRSEEKLAALPANPNLQTKAKDAFDLTLSELQAVDVVVDAMATSPDKAYR
HVDLATKLIAQLREQQRPRLLFILGAGSLTTGDDQHLFVHDIESNPANAAFVAIPQNQLAELTFLRTVTNVDWVGISPAT
NFTAGPATPAQYGHDTLLTNTTGESVTNSGTMAVAVLNELETPKHHQERFTVANQ

Sequences:

>Translated_215_residues
MKIMIIGATGMAGSAITKLALERNHTVVAIGRSEEKLAALPANPNLQTKAKDAFDLTLSELQAVDVVVDAMATSPDKAYR
HVDLATKLIAQLREQQRPRLLFILGAGSLTTGDDQHLFVHDIESNPANAAFVAIPQNQLAELTFLRTVTNVDWVGISPAT
NFTAGPATPAQYGHDTLLTNTTGESVTNSGTMAVAVLNELETPKHHQERFTVANQ
>Mature_215_residues
MKIMIIGATGMAGSAITKLALERNHTVVAIGRSEEKLAALPANPNLQTKAKDAFDLTLSELQAVDVVVDAMATSPDKAYR
HVDLATKLIAQLREQQRPRLLFILGAGSLTTGDDQHLFVHDIESNPANAAFVAIPQNQLAELTFLRTVTNVDWVGISPAT
NFTAGPATPAQYGHDTLLTNTTGESVTNSGTMAVAVLNELETPKHHQERFTVANQ

Specific function: Unknown

COG id: COG2910

COG function: function code R; Putative NADH-flavin reductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR008030 [H]

Pfam domain/function: PF05368 NmrA [H]

EC number: NA

Molecular weight: Translated: 23063; Mature: 23063

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIMIIGATGMAGSAITKLALERNHTVVAIGRSEEKLAALPANPNLQTKAKDAFDLTLSE
CEEEEEECCCCCCHHHHHHHEECCCEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHH
LQAVDVVVDAMATSPDKAYRHVDLATKLIAQLREQQRPRLLFILGAGSLTTGDDQHLFVH
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEE
DIESNPANAAFVAIPQNQLAELTFLRTVTNVDWVGISPATNFTAGPATPAQYGHDTLLTN
ECCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEC
TTGESVTNSGTMAVAVLNELETPKHHQERFTVANQ
CCCCCCCCCCCEEEEEEHHCCCCCCHHHHEEECCC
>Mature Secondary Structure
MKIMIIGATGMAGSAITKLALERNHTVVAIGRSEEKLAALPANPNLQTKAKDAFDLTLSE
CEEEEEECCCCCCHHHHHHHEECCCEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHH
LQAVDVVVDAMATSPDKAYRHVDLATKLIAQLREQQRPRLLFILGAGSLTTGDDQHLFVH
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEE
DIESNPANAAFVAIPQNQLAELTFLRTVTNVDWVGISPATNFTAGPATPAQYGHDTLLTN
ECCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEC
TTGESVTNSGTMAVAVLNELETPKHHQERFTVANQ
CCCCCCCCCCCEEEEEEHHCCCCCCHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]