Click here to switch to the map view.

The map label for this gene is ytlR [H]

Identifier: 28378772

GI number: 28378772

Start: 1951689

End: 1952648

Strand: Direct

Name: ytlR [H]

Synonym: lp_2159

Alternate gene names: 28378772

Gene position: 1951689-1952648 (Clockwise)

Preceding gene: 28378771

Following gene: 28378775

Centisome position: 58.99

GC content: 46.88

Gene sequence:

>960_bases
TTGATTGCTGAATACTACATTATTATTAATGAACTGGCAGGATCTGGTCACGGTAAGGTCGTTTGGGAAACCGTCAAGCC
GATTCTAGAACAACGACAGATTCGATTTGAATATCGAATTTCTGAATATGCCGGCCACACAATTCGGCTCGCAAATGAGT
ACGTTAAAACCATTCAACGACGACCAAACGTGACCCCGGTCATTCTGGTCATTGGTGGTGATGGCACACTGAACGAGGCC
TTGAATGGTATTATGCAGGTCCCACAAGCTGAACCGATCCCGCTCGCCTACATTCCTGGAGGTTCGGGCAACGACTTTGC
TCGCGGTCTGGGTATGGCGACTGATCCAGCAATTGCACTTGCACAAGTACTCAACAATATGCGGCCCCGTTCGTTAAATG
TTGGTTATTTCCATGAAACCTTGAAAAACGAACACCGGTATTTCGTCAACAACGTTGGTTTAGGATTTGACGCTCAAATC
GTTGATGACACAAACCGTAGCAAAAAGAAGGGCCGTCTGGGTCGTTGGGCTTATCTCAGTAACATGCTGGCCGCATATTC
CCAACAGGAAGGCTTCCCGCTAACCGTACACGTTAACCGGAAGCGAGACTATTATAAGCGGGCTTTCCTTTGTACAGTCT
CGAACATTCCATACTTTGGTGGCGGAGTTAAAATTCTGCCTCAGGCTAATCTGCACGATAATCAGCTCGAATTGATCGTT
GTCGAAGAGCCTCACTGGTGGATTATCCTCTGGTTGTTCGTCTTACTGCTACTGGGTGGCCGTCATCTTAAGTCGCGTTT
CGTTCACCATTATCGCAACGCTAACTTGCACTTGTTGGTTAACTCTGTTGAAATTGGTCAGATGGATGGTCAAATTATTG
GGAATCGTAATTACGACCTCTACTTGTCCACCCATCCCTACCCATTCTGGATCGACACTAGTATCCATGACCACCACTAA

Upstream 100 bases:

>100_bases
GGCACCCAATGATTCTGCCAATGTTGATTATGAACTAACTACTTGCCGGAACGATCTCGTTCCGGTTTTTTATGGTGTAA
GACTGATATGAGGTGTAATT

Downstream 100 bases:

>100_bases
CTCTACTGCTAAAACAATACAAATTAGCGATAAAAAGTCGTTGCGAAGATGCTCGCAACGACTTTTTTATAGGACCAAGA
TTGGCAATTCATACTACTTG

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MIAEYYIIINELAGSGHGKVVWETVKPILEQRQIRFEYRISEYAGHTIRLANEYVKTIQRRPNVTPVILVIGGDGTLNEA
LNGIMQVPQAEPIPLAYIPGGSGNDFARGLGMATDPAIALAQVLNNMRPRSLNVGYFHETLKNEHRYFVNNVGLGFDAQI
VDDTNRSKKKGRLGRWAYLSNMLAAYSQQEGFPLTVHVNRKRDYYKRAFLCTVSNIPYFGGGVKILPQANLHDNQLELIV
VEEPHWWIILWLFVLLLLGGRHLKSRFVHHYRNANLHLLVNSVEIGQMDGQIIGNRNYDLYLSTHPYPFWIDTSIHDHH

Sequences:

>Translated_319_residues
MIAEYYIIINELAGSGHGKVVWETVKPILEQRQIRFEYRISEYAGHTIRLANEYVKTIQRRPNVTPVILVIGGDGTLNEA
LNGIMQVPQAEPIPLAYIPGGSGNDFARGLGMATDPAIALAQVLNNMRPRSLNVGYFHETLKNEHRYFVNNVGLGFDAQI
VDDTNRSKKKGRLGRWAYLSNMLAAYSQQEGFPLTVHVNRKRDYYKRAFLCTVSNIPYFGGGVKILPQANLHDNQLELIV
VEEPHWWIILWLFVLLLLGGRHLKSRFVHHYRNANLHLLVNSVEIGQMDGQIIGNRNYDLYLSTHPYPFWIDTSIHDHH
>Mature_319_residues
MIAEYYIIINELAGSGHGKVVWETVKPILEQRQIRFEYRISEYAGHTIRLANEYVKTIQRRPNVTPVILVIGGDGTLNEA
LNGIMQVPQAEPIPLAYIPGGSGNDFARGLGMATDPAIALAQVLNNMRPRSLNVGYFHETLKNEHRYFVNNVGLGFDAQI
VDDTNRSKKKGRLGRWAYLSNMLAAYSQQEGFPLTVHVNRKRDYYKRAFLCTVSNIPYFGGGVKILPQANLHDNQLELIV
VEEPHWWIILWLFVLLLLGGRHLKSRFVHHYRNANLHLLVNSVEIGQMDGQIIGNRNYDLYLSTHPYPFWIDTSIHDHH

Specific function: May catalyze the ATP-dependent phosphorylation of lipids other than diacylglycerol (DAG). In fact, is not able to exhibit diacylglycerol kinase activity in vitro [H]

COG id: COG1597

COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DAGKc domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005218
- InterPro:   IPR001206 [H]

Pfam domain/function: PF00781 DAGK_cat [H]

EC number: NA

Molecular weight: Translated: 36422; Mature: 36422

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAEYYIIINELAGSGHGKVVWETVKPILEQRQIRFEYRISEYAGHTIRLANEYVKTIQR
CCEEEEEEEEECCCCCCCCEEHHHHHHHHHHHHEEEEEEEHHHCCCEEEHHHHHHHHHHH
RPNVTPVILVIGGDGTLNEALNGIMQVPQAEPIPLAYIPGGSGNDFARGLGMATDPAIAL
CCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHCCCCCCHHHHH
AQVLNNMRPRSLNVGYFHETLKNEHRYFVNNVGLGFDAQIVDDTNRSKKKGRLGRWAYLS
HHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCCHHCCCCHHHHHHH
NMLAAYSQQEGFPLTVHVNRKRDYYKRAFLCTVSNIPYFGGGVKILPQANLHDNQLELIV
HHHHHHHCCCCCEEEEEECCCCCHHHEEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEE
VEEPHWWIILWLFVLLLLGGRHLKSRFVHHYRNANLHLLVNSVEIGQMDGQIIGNRNYDL
EECCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEECCCCEEE
YLSTHPYPFWIDTSIHDHH
EEECCCCEEEEECCCCCCC
>Mature Secondary Structure
MIAEYYIIINELAGSGHGKVVWETVKPILEQRQIRFEYRISEYAGHTIRLANEYVKTIQR
CCEEEEEEEEECCCCCCCCEEHHHHHHHHHHHHEEEEEEEHHHCCCEEEHHHHHHHHHHH
RPNVTPVILVIGGDGTLNEALNGIMQVPQAEPIPLAYIPGGSGNDFARGLGMATDPAIAL
CCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHCCCCCCHHHHH
AQVLNNMRPRSLNVGYFHETLKNEHRYFVNNVGLGFDAQIVDDTNRSKKKGRLGRWAYLS
HHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCCHHCCCCHHHHHHH
NMLAAYSQQEGFPLTVHVNRKRDYYKRAFLCTVSNIPYFGGGVKILPQANLHDNQLELIV
HHHHHHHCCCCCEEEEEECCCCCHHHEEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEE
VEEPHWWIILWLFVLLLLGGRHLKSRFVHHYRNANLHLLVNSVEIGQMDGQIIGNRNYDL
EECCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEECCCCEEE
YLSTHPYPFWIDTSIHDHH
EEECCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]