Click here to switch to the map view.

The map label for this gene is ISP1 [H]

Identifier: 28378775

GI number: 28378775

Start: 1955214

End: 1956476

Strand: Direct

Name: ISP1 [H]

Synonym: lp_2164

Alternate gene names: 28378775

Gene position: 1955214-1956476 (Clockwise)

Preceding gene: 28378772

Following gene: 28378808

Centisome position: 59.1

GC content: 40.38

Gene sequence:

>1263_bases
ATGTCCCAAGACCATTCTACTAAAGTACTGCTCCAAATTAAAGACCCAAATATTACTGATTTAGTTGTTCAAGAAGCTAC
TAACGGAAGCTTACAAGTGCTTGCGAAGCTAACGTATCCGGTTACTGTTTGCGCACGTTGTGGCAAACGTTCCATGGTTA
AGAATGGCTTTAAGACCGTTCACATCAGAATTCCTAGAATTAGCGAACGGGTCACCATCCTTAACTTAAAGAAGCAGCGA
TTTATCTGTAAAAATTGTGGTAAAAGTAGTTTAACAACGACTACGCTGGTTAAAAAACATCATCAAATATCTGAAAACAG
TCTTCATGCCATTGATCTATCATTAACTGAAGACCGTACGATGGCGAGTATTGCGGCTCAATACAATGTCTCGACCAATA
CGATTAGTCGCCGAATAAAGTTGCTCGGACAAGGTACCCAACCAGCTTTCAACGGACTACCAACGATGCTTTGTATCGAC
GAGTTTCGTTCAACTGATAAACAAATGAGTTTTATTGCGGTGGATGCCCAAACCCACGACATCATTACAATATTACCAGG
ACGTAAGAATGCCGATATTAAAGACTTCTTTCTCAATCATTATTCTAAACGTCATCGTGACCGCGTAACCCGGGTTGTGA
TGGACTTTAATTCTCAATATCAACCCGCGATTCGAACACTCTTTCCACACGCCAAACTGGTCGCGGATAACTTTCATCTT
GTTCAAATGGCCTTACGATCTTTGAATCAAACTCGGGTCCAACTCATGAAACGCTTTAACCCTAAGAGTCGTGAATACCG
AGTGCTTAAATATTATTGGCGGTTATATTTAAAAGATTATGACAGCCTCGAAAAGCGCAAACCCCAATGGTTTGCGCATC
TTAAAGATCGCATGACACAAGAGCAATTAGTCGTAGCCGGTTTAAATCTAGACCAACAGTTTCGACAAACCTACCAAGCC
GCACATGCCTTAGTTAAGGCTTTTCAAAAGCGTGATTATCGATCCTTCAAAGCAGCACTAGGTCATGTCGAAAATATCAG
TCCTCAGCTAATGACCAATATTAAAAGCTTTATCAAGAACCGGCAACTCATCAAAAATATGACTACCGGCCGATTATCAA
ATGGTCCCGTCGAAGGTGTGAACCGTAAAATCAAGCAAATCAAAAGAACCGCGTATGGTTACAAGAACTGGCAAAACTTT
ATTTATCGAATTCAAATTGAGTTCAAAATCAAAATCGAAAAAAAGAGCCCAATTCGTAAATGA

Upstream 100 bases:

>100_bases
GGATAAAATCCATCAACACTATTTTTATGTACAACAAAAGGACATATCGTCCTGTGCTACAATCAAGTCGACCAAAACCA
ATTGAAAGCGAGTGTCAGAT

Downstream 100 bases:

>100_bases
ATTGGATTCTAAATATAACTTCATCAACACCGGTTGACAGAGACCCGCTTAAAGTTGCGAGCTAGATGCGAGGATCAAAC
AACCGATCAACTGGTTGCTG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MSQDHSTKVLLQIKDPNITDLVVQEATNGSLQVLAKLTYPVTVCARCGKRSMVKNGFKTVHIRIPRISERVTILNLKKQR
FICKNCGKSSLTTTTLVKKHHQISENSLHAIDLSLTEDRTMASIAAQYNVSTNTISRRIKLLGQGTQPAFNGLPTMLCID
EFRSTDKQMSFIAVDAQTHDIITILPGRKNADIKDFFLNHYSKRHRDRVTRVVMDFNSQYQPAIRTLFPHAKLVADNFHL
VQMALRSLNQTRVQLMKRFNPKSREYRVLKYYWRLYLKDYDSLEKRKPQWFAHLKDRMTQEQLVVAGLNLDQQFRQTYQA
AHALVKAFQKRDYRSFKAALGHVENISPQLMTNIKSFIKNRQLIKNMTTGRLSNGPVEGVNRKIKQIKRTAYGYKNWQNF
IYRIQIEFKIKIEKKSPIRK

Sequences:

>Translated_420_residues
MSQDHSTKVLLQIKDPNITDLVVQEATNGSLQVLAKLTYPVTVCARCGKRSMVKNGFKTVHIRIPRISERVTILNLKKQR
FICKNCGKSSLTTTTLVKKHHQISENSLHAIDLSLTEDRTMASIAAQYNVSTNTISRRIKLLGQGTQPAFNGLPTMLCID
EFRSTDKQMSFIAVDAQTHDIITILPGRKNADIKDFFLNHYSKRHRDRVTRVVMDFNSQYQPAIRTLFPHAKLVADNFHL
VQMALRSLNQTRVQLMKRFNPKSREYRVLKYYWRLYLKDYDSLEKRKPQWFAHLKDRMTQEQLVVAGLNLDQQFRQTYQA
AHALVKAFQKRDYRSFKAALGHVENISPQLMTNIKSFIKNRQLIKNMTTGRLSNGPVEGVNRKIKQIKRTAYGYKNWQNF
IYRIQIEFKIKIEKKSPIRK
>Mature_419_residues
SQDHSTKVLLQIKDPNITDLVVQEATNGSLQVLAKLTYPVTVCARCGKRSMVKNGFKTVHIRIPRISERVTILNLKKQRF
ICKNCGKSSLTTTTLVKKHHQISENSLHAIDLSLTEDRTMASIAAQYNVSTNTISRRIKLLGQGTQPAFNGLPTMLCIDE
FRSTDKQMSFIAVDAQTHDIITILPGRKNADIKDFFLNHYSKRHRDRVTRVVMDFNSQYQPAIRTLFPHAKLVADNFHLV
QMALRSLNQTRVQLMKRFNPKSREYRVLKYYWRLYLKDYDSLEKRKPQWFAHLKDRMTQEQLVVAGLNLDQQFRQTYQAA
HALVKAFQKRDYRSFKAALGHVENISPQLMTNIKSFIKNRQLIKNMTTGRLSNGPVEGVNRKIKQIKRTAYGYKNWQNFI
YRIQIEFKIKIEKKSPIRK

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 48887; Mature: 48755

Theoretical pI: Translated: 10.93; Mature: 10.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQDHSTKVLLQIKDPNITDLVVQEATNGSLQVLAKLTYPVTVCARCGKRSMVKNGFKTV
CCCCCCCEEEEEECCCCCHHHHEECCCCCCEEEHHHHHHHHHHHHHCCCHHHHHCCCEEE
HIRIPRISERVTILNLKKQRFICKNCGKSSLTTTTLVKKHHQISENSLHAIDLSLTEDRT
EEECCCCCCCEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCHH
MASIAAQYNVSTNTISRRIKLLGQGTQPAFNGLPTMLCIDEFRSTDKQMSFIAVDAQTHD
HHHHHHHCCCCHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCC
IITILPGRKNADIKDFFLNHYSKRHRDRVTRVVMDFNSQYQPAIRTLFPHAKLVADNFHL
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHCCHHH
VQMALRSLNQTRVQLMKRFNPKSREYRVLKYYWRLYLKDYDSLEKRKPQWFAHLKDRMTQ
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCH
EQLVVAGLNLDQQFRQTYQAAHALVKAFQKRDYRSFKAALGHVENISPQLMTNIKSFIKN
HHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
RQLIKNMTTGRLSNGPVEGVNRKIKQIKRTAYGYKNWQNFIYRIQIEFKIKIEKKSPIRK
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCEEEEEEEEEEEEEECCCCCCC
>Mature Secondary Structure 
SQDHSTKVLLQIKDPNITDLVVQEATNGSLQVLAKLTYPVTVCARCGKRSMVKNGFKTV
CCCCCCEEEEEECCCCCHHHHEECCCCCCEEEHHHHHHHHHHHHHCCCHHHHHCCCEEE
HIRIPRISERVTILNLKKQRFICKNCGKSSLTTTTLVKKHHQISENSLHAIDLSLTEDRT
EEECCCCCCCEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCHH
MASIAAQYNVSTNTISRRIKLLGQGTQPAFNGLPTMLCIDEFRSTDKQMSFIAVDAQTHD
HHHHHHHCCCCHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCC
IITILPGRKNADIKDFFLNHYSKRHRDRVTRVVMDFNSQYQPAIRTLFPHAKLVADNFHL
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHCCHHH
VQMALRSLNQTRVQLMKRFNPKSREYRVLKYYWRLYLKDYDSLEKRKPQWFAHLKDRMTQ
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCH
EQLVVAGLNLDQQFRQTYQAAHALVKAFQKRDYRSFKAALGHVENISPQLMTNIKSFIKN
HHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
RQLIKNMTTGRLSNGPVEGVNRKIKQIKRTAYGYKNWQNFIYRIQIEFKIKIEKKSPIRK
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCEEEEEEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]