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The map label for this gene is 28378639

Identifier: 28378639

GI number: 28378639

Start: 1808476

End: 1809144

Strand: Direct

Name: 28378639

Synonym: lp_2002

Alternate gene names: NA

Gene position: 1808476-1809144 (Clockwise)

Preceding gene: 28378637

Following gene: 28378640

Centisome position: 54.67

GC content: 36.32

Gene sequence:

>669_bases
ATGTATCAACTTGAAAATCTATTAAAGAATCAGTGTGACCCCAGGTTATCCGGAGTTATGTCAATGGCTGTTAGGCATGC
ATCCAACTCCTTTGATTCGTTAGTTGCTAGCACACCAATTTTACAAAGAGAAGAATTTAGAAACACATACGGTTACTTAC
GTCATTCTTTTGTTGATTTCAGTTTGAAATGGGCTGTTAATGAACACTTAATTGATGGAGAAATCATTCCTGGAACTTCA
AGCAAGTATCCAAACGGTCACACTTATTATTCACTTAAGGTAAAGGGAGCAGTTATAAATCCGGTAAAAACAAGAGGACC
TAAAGCTATCCCCAAGAATGCACTCTACAGACAAGAACTTGGGCTTATGAATCAACAAATTAGCCTTTTTGATAATATTG
ATGACCTAATGAACAAACAAATTAATGCGTCCGCTCCGGCATTTCTTTTACTCACTTATGGTGGTAAAAACTATAGTTTA
GATTATATTGAACTTGGATTGCCAGATGTGGATACCGGAAAATGGATTGGTCAGGCTAATATATTAAACGCGCCATTGAT
ACTACCAAAACACAAAACAAAAGAAGTGACGGATAAATTAGACCTCACCCTTACCTCTATATCCAAGAAAATATTGGAGG
AAGAAAATGATGGAGACTACACAGTTTAA

Upstream 100 bases:

>100_bases
GAACAAAGGAAAATCGGCACACGTCTTGGTGTTGACATTTTTTTCAAAAAATGGCAAACTGTTAACATAGTAAGCGCCTA
GTAAAGGAGGCAATCGCAGT

Downstream 100 bases:

>100_bases
TCCAATTCAATTAAAACGAGCAAGAGTTGCTCGAGGAAAAACAATGAAAGTTTTAGCTGAGGAAACAGGTATTTCCCGGC
AGATGATTTCTAATTATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MYQLENLLKNQCDPRLSGVMSMAVRHASNSFDSLVASTPILQREEFRNTYGYLRHSFVDFSLKWAVNEHLIDGEIIPGTS
SKYPNGHTYYSLKVKGAVINPVKTRGPKAIPKNALYRQELGLMNQQISLFDNIDDLMNKQINASAPAFLLLTYGGKNYSL
DYIELGLPDVDTGKWIGQANILNAPLILPKHKTKEVTDKLDLTLTSISKKILEEENDGDYTV

Sequences:

>Translated_222_residues
MYQLENLLKNQCDPRLSGVMSMAVRHASNSFDSLVASTPILQREEFRNTYGYLRHSFVDFSLKWAVNEHLIDGEIIPGTS
SKYPNGHTYYSLKVKGAVINPVKTRGPKAIPKNALYRQELGLMNQQISLFDNIDDLMNKQINASAPAFLLLTYGGKNYSL
DYIELGLPDVDTGKWIGQANILNAPLILPKHKTKEVTDKLDLTLTSISKKILEEENDGDYTV
>Mature_222_residues
MYQLENLLKNQCDPRLSGVMSMAVRHASNSFDSLVASTPILQREEFRNTYGYLRHSFVDFSLKWAVNEHLIDGEIIPGTS
SKYPNGHTYYSLKVKGAVINPVKTRGPKAIPKNALYRQELGLMNQQISLFDNIDDLMNKQINASAPAFLLLTYGGKNYSL
DYIELGLPDVDTGKWIGQANILNAPLILPKHKTKEVTDKLDLTLTSISKKILEEENDGDYTV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24951; Mature: 24951

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQLENLLKNQCDPRLSGVMSMAVRHASNSFDSLVASTPILQREEFRNTYGYLRHSFVDF
CCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCE
SLKWAVNEHLIDGEIIPGTSSKYPNGHTYYSLKVKGAVINPVKTRGPKAIPKNALYRQEL
EEEEEECCEEECCEEECCCCCCCCCCCEEEEEEECCEEECCHHCCCCCCCCCHHHHHHHH
GLMNQQISLFDNIDDLMNKQINASAPAFLLLTYGGKNYSLDYIELGLPDVDTGKWIGQAN
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCEECCCC
ILNAPLILPKHKTKEVTDKLDLTLTSISKKILEEENDGDYTV
CCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MYQLENLLKNQCDPRLSGVMSMAVRHASNSFDSLVASTPILQREEFRNTYGYLRHSFVDF
CCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCE
SLKWAVNEHLIDGEIIPGTSSKYPNGHTYYSLKVKGAVINPVKTRGPKAIPKNALYRQEL
EEEEEECCEEECCEEECCCCCCCCCCCEEEEEEECCEEECCHHCCCCCCCCCHHHHHHHH
GLMNQQISLFDNIDDLMNKQINASAPAFLLLTYGGKNYSLDYIELGLPDVDTGKWIGQAN
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCEECCCC
ILNAPLILPKHKTKEVTDKLDLTLTSISKKILEEENDGDYTV
CCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA