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The map label for this gene is 28378640

Identifier: 28378640

GI number: 28378640

Start: 1809122

End: 1810249

Strand: Direct

Name: 28378640

Synonym: lp_2003

Alternate gene names: NA

Gene position: 1809122-1810249 (Clockwise)

Preceding gene: 28378639

Following gene: 28378641

Centisome position: 54.68

GC content: 34.93

Gene sequence:

>1128_bases
ATGATGGAGACTACACAGTTTAATCCAATTCAATTAAAACGAGCAAGAGTTGCTCGAGGAAAAACAATGAAAGTTTTAGC
TGAGGAAACAGGTATTTCCCGGCAGATGATTTCTAATTATGAATTAGGGAAAACTGTCCCTAGTGGCTTGAACTTAGTAA
AATTAATTTCAGTTCTTAATTTCCCTAAAAACTATTTTTCAGCTACTCAAGCCAGTAACTTGCATGGCGCTACTTTCTTT
CGTAGTCAAAATGCTGCAACAAAACGTGCACGTGACATGCAGAGTGTGAGATTGTCATTTCAAAATGATATTTATACTAC
CTTAAGCCAATATGTCAACTTTCCAAAAGTTGACCTTCCTGAATCATTGGATATGGACGTAGACGACATTACGAACGATA
ATATTAAGTTTATGGCCATGCGGGTAAGAGATCAATGGGACTTAGGTACAAAAACGCCAATCGAAAATCTTATTCAAACT
GCTGAAATACACGGAATTGTTGTAGTTAAAACAAATATGACAAACGATAAGCTAGATGCCGTTTCTGAAATAATAGAAGG
AAGACCATTTATCATGCTTACTGATAATGGGGAATCTGCCGTTAGAAGAAGGTTCAATGTTGCTCATGAATTGGGACACA
TTGTATTACATGCAGGAATTGAAAGTATCCATGACTTTACGTCACAACAATTAAAAAACACCATTGAGCGTCAAGCTAAT
CTATTCGCTTCAACCTTTTTAATGCCAGATGATGCATTTGTTGAAAGCTTGCTTTCGACCTCTTTAGATTATTACATCAA
ATTAAAACAGTACTGGAAAGCCTCCATACAGTCAATGATTTACAAGACGTATCAATTAGGCTTAATCAATGATGACCAGA
AATTATATCTTAACAAAAAAATTTCCTGGAACAAGTGGAGAAAAATTGAACCACTTGACAACATCTTGGAAATAGAGAAC
CCTACCCTTTTTGGAAAAGTTTTTAATATGATTATTGATCATAAAGTTGTTTCTCAAGCTGACTTACTTTCAGAGTTAAA
GCTTCCTTTTGATGAATTGGAATGCTCCTTGGGAATTCAATTAGCTACGCAAAAAAACATTAGCGAACCAAAATTACGCT
TATTATAA

Upstream 100 bases:

>100_bases
AACGCGCCATTGATACTACCAAAACACAAAACAAAAGAAGTGACGGATAAATTAGACCTCACCCTTACCTCTATATCCAA
GAAAATATTGGAGGAAGAAA

Downstream 100 bases:

>100_bases
TTGGGTTTATGTTAACTAGGAGGTTTTTAATGAATCCGTATTTTTTGATTATTGGTATGGTGCTTTTTGGGATAGCTTTT
ATTATTTATTTACTTGTTAA

Product: transcription regulator (putative)

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Zn Peptidase; Transcriptional Regulator HTH_3 Family; Conserved Domain Protein; Transcription Regulator; HTH Domain-Containing Protein; DNA-Bining Transcriptional Regulator; XRE Family Transcriptional Regulator; Adenine Deaminase; Phage-Like Protein; Regulatory Protein

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MMETTQFNPIQLKRARVARGKTMKVLAEETGISRQMISNYELGKTVPSGLNLVKLISVLNFPKNYFSATQASNLHGATFF
RSQNAATKRARDMQSVRLSFQNDIYTTLSQYVNFPKVDLPESLDMDVDDITNDNIKFMAMRVRDQWDLGTKTPIENLIQT
AEIHGIVVVKTNMTNDKLDAVSEIIEGRPFIMLTDNGESAVRRRFNVAHELGHIVLHAGIESIHDFTSQQLKNTIERQAN
LFASTFLMPDDAFVESLLSTSLDYYIKLKQYWKASIQSMIYKTYQLGLINDDQKLYLNKKISWNKWRKIEPLDNILEIEN
PTLFGKVFNMIIDHKVVSQADLLSELKLPFDELECSLGIQLATQKNISEPKLRLL

Sequences:

>Translated_375_residues
MMETTQFNPIQLKRARVARGKTMKVLAEETGISRQMISNYELGKTVPSGLNLVKLISVLNFPKNYFSATQASNLHGATFF
RSQNAATKRARDMQSVRLSFQNDIYTTLSQYVNFPKVDLPESLDMDVDDITNDNIKFMAMRVRDQWDLGTKTPIENLIQT
AEIHGIVVVKTNMTNDKLDAVSEIIEGRPFIMLTDNGESAVRRRFNVAHELGHIVLHAGIESIHDFTSQQLKNTIERQAN
LFASTFLMPDDAFVESLLSTSLDYYIKLKQYWKASIQSMIYKTYQLGLINDDQKLYLNKKISWNKWRKIEPLDNILEIEN
PTLFGKVFNMIIDHKVVSQADLLSELKLPFDELECSLGIQLATQKNISEPKLRLL
>Mature_375_residues
MMETTQFNPIQLKRARVARGKTMKVLAEETGISRQMISNYELGKTVPSGLNLVKLISVLNFPKNYFSATQASNLHGATFF
RSQNAATKRARDMQSVRLSFQNDIYTTLSQYVNFPKVDLPESLDMDVDDITNDNIKFMAMRVRDQWDLGTKTPIENLIQT
AEIHGIVVVKTNMTNDKLDAVSEIIEGRPFIMLTDNGESAVRRRFNVAHELGHIVLHAGIESIHDFTSQQLKNTIERQAN
LFASTFLMPDDAFVESLLSTSLDYYIKLKQYWKASIQSMIYKTYQLGLINDDQKLYLNKKISWNKWRKIEPLDNILEIEN
PTLFGKVFNMIIDHKVVSQADLLSELKLPFDELECSLGIQLATQKNISEPKLRLL

Specific function: Unknown

COG id: COG2856

COG function: function code E; Predicted Zn peptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42932; Mature: 42932

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: PS50943 HTH_CROC1 ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMETTQFNPIQLKRARVARGKTMKVLAEETGISRQMISNYELGKTVPSGLNLVKLISVLN
CCCCCCCCCHHHHHHHHHCCCHHEEHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHH
FPKNYFSATQASNLHGATFFRSQNAATKRARDMQSVRLSFQNDIYTTLSQYVNFPKVDLP
CCHHHHHHHHCCCCCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
ESLDMDVDDITNDNIKFMAMRVRDQWDLGTKTPIENLIQTAEIHGIVVVKTNMTNDKLDA
CCCCCCHHHCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCEEEEEEECCCCHHHHH
VSEIIEGRPFIMLTDNGESAVRRRFNVAHELGHIVLHAGIESIHDFTSQQLKNTIERQAN
HHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFASTFLMPDDAFVESLLSTSLDYYIKLKQYWKASIQSMIYKTYQLGLINDDQKLYLNKK
HHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEEEECC
ISWNKWRKIEPLDNILEIENPTLFGKVFNMIIDHKVVSQADLLSELKLPFDELECSLGIQ
CCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCEE
LATQKNISEPKLRLL
EECCCCCCCCCCCCC
>Mature Secondary Structure
MMETTQFNPIQLKRARVARGKTMKVLAEETGISRQMISNYELGKTVPSGLNLVKLISVLN
CCCCCCCCCHHHHHHHHHCCCHHEEHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHH
FPKNYFSATQASNLHGATFFRSQNAATKRARDMQSVRLSFQNDIYTTLSQYVNFPKVDLP
CCHHHHHHHHCCCCCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
ESLDMDVDDITNDNIKFMAMRVRDQWDLGTKTPIENLIQTAEIHGIVVVKTNMTNDKLDA
CCCCCCHHHCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCEEEEEEECCCCHHHHH
VSEIIEGRPFIMLTDNGESAVRRRFNVAHELGHIVLHAGIESIHDFTSQQLKNTIERQAN
HHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFASTFLMPDDAFVESLLSTSLDYYIKLKQYWKASIQSMIYKTYQLGLINDDQKLYLNKK
HHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEEEECC
ISWNKWRKIEPLDNILEIENPTLFGKVFNMIIDHKVVSQADLLSELKLPFDELECSLGIQ
CCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCEE
LATQKNISEPKLRLL
EECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA