Definition | Lactobacillus plantarum WCFS1, complete genome. |
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Accession | NC_004567 |
Length | 3,308,274 |
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The map label for this gene is 28378472
Identifier: 28378472
GI number: 28378472
Start: 1630517
End: 1630807
Strand: Direct
Name: 28378472
Synonym: lp_1800
Alternate gene names: NA
Gene position: 1630517-1630807 (Clockwise)
Preceding gene: 28378471
Following gene: 28378473
Centisome position: 49.29
GC content: 52.92
Gene sequence:
>291_bases TTGAATCACAATTATGTGGAAGTTAAGTATCCAGCCATTTTTCGTGATGAAGGCACCTACTGGGATGTCCGTTTTCCAGA CGTTCCTGCCGCCCAGACCTTTGGGGCGAGTGTCCAAGTTGCTGCGGACAATGCGGCGAACGCGTTGGCTATTGCGCTCT TTGAACAATCACTCCCGCCGGCGTCGGATCCGCAGTACTGGCGGTTGGCTTCAACGGAATTTGTTGTTTGGATCACGATG GCGGATGTCCAGTTTGGTCCGGGCGCTGATACACCGGAACCAATGAACTAA
Upstream 100 bases:
>100_bases GCTGATTAATTTTAATTGCAATCATGATGTTTGAGCTGGGCTTTTGCGACCGTTTTCGGTATAATAGCCTTAAAATGATT GTAAGAAGTGAGTGATAAAA
Downstream 100 bases:
>100_bases TGCGTATAAAAGGTAAACGGGTCGGCACCTAATTGGTGTTTCGGACCCGTTTTCTTATTTCATGAAAGAAGTTGAGAAAC CTTGCCAAACCAGCCACTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MNHNYVEVKYPAIFRDEGTYWDVRFPDVPAAQTFGASVQVAADNAANALAIALFEQSLPPASDPQYWRLASTEFVVWITM ADVQFGPGADTPEPMN
Sequences:
>Translated_96_residues MNHNYVEVKYPAIFRDEGTYWDVRFPDVPAAQTFGASVQVAADNAANALAIALFEQSLPPASDPQYWRLASTEFVVWITM ADVQFGPGADTPEPMN >Mature_96_residues MNHNYVEVKYPAIFRDEGTYWDVRFPDVPAAQTFGASVQVAADNAANALAIALFEQSLPPASDPQYWRLASTEFVVWITM ADVQFGPGADTPEPMN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10609; Mature: 10609
Theoretical pI: Translated: 3.89; Mature: 3.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHNYVEVKYPAIFRDEGTYWDVRFPDVPAAQTFGASVQVAADNAANALAIALFEQSLPP CCCCEEEEECCEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCC ASDPQYWRLASTEFVVWITMADVQFGPGADTPEPMN CCCCCEEEEECCCEEEEEEEEEEEECCCCCCCCCCC >Mature Secondary Structure MNHNYVEVKYPAIFRDEGTYWDVRFPDVPAAQTFGASVQVAADNAANALAIALFEQSLPP CCCCEEEEECCEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCC ASDPQYWRLASTEFVVWITMADVQFGPGADTPEPMN CCCCCEEEEECCCEEEEEEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA