Definition | Lactobacillus plantarum WCFS1, complete genome. |
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Accession | NC_004567 |
Length | 3,308,274 |
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The map label for this gene is 28378473
Identifier: 28378473
GI number: 28378473
Start: 1630889
End: 1631677
Strand: Direct
Name: 28378473
Synonym: lp_1801
Alternate gene names: NA
Gene position: 1630889-1631677 (Clockwise)
Preceding gene: 28378472
Following gene: 28378475
Centisome position: 49.3
GC content: 49.05
Gene sequence:
>789_bases TTGCCAAACCAGCCACTAATCTTTGATACGGCCATTGCGAAGGATAAGCCAGAAAATATCCGGCACCCGCACAATGCCTG TCCTTTTTGCGATCCGGGCCAGTTGACTGATATTATCGCGCAAGATGCAGATCGTATCTGGCTATTGAATAAATTTCCGA CCTTGCAAGCTACCTGGCAAACGATCGTGATCGAGGCGGCCCGCCATGATGGCGATATTGCTACTTACTCATCCGCACAA AACCGCGCTGTCTTCACGTTTGCTCTGAAGCACTGGCAAGCCACAATTGCGAGTGGTCGGTTCAAATCGGTGTTGTGCTA TAAAAATTTTGGCCCACACTCGGGTGGAAGTTTACGGCATCCACACATGCAAATCGTTGGTTTAATGGCCGCCGATGGTT ACGCTAACGTGACAGCAGCCAATTTGACTGGGTATTCAGTGTTGGCGGTCGATCAGGTCCAAGTGACTGTTTCTGATCGG CCTATCATGGGATTTGTCGAAATCAACGTTGCTGCTCCAGCTACCGCGATTGCACCGTTAGCCGATGCTGTGCAACAGGT CGTCCAGTATACGCTAAATACGTATTTTCATGGGCAGTGTGATAGTTATAACCTATTTTTCTATCCGCGGGATGACCAGA TTGTTGCCAAAGTGGTCCCACTATTTAATGTCTCACCATACTATATCGGCTATCGGCTGGCACAAGCAGATACGCCAAAG CGAATGCGCGCCATCGCTGAGGAAATTCGGCAACAGTTTGAACGATCGAATCTGGCTCACTCAAACTAG
Upstream 100 bases:
>100_bases ACCGGAACCAATGAACTAATGCGTATAAAAGGTAAACGGGTCGGCACCTAATTGGTGTTTCGGACCCGTTTTCTTATTTC ATGAAAGAAGTTGAGAAACC
Downstream 100 bases:
>100_bases CTAATAGGCCGAACAGCCCCAAACGACGGAAAAGGCCCCCAGGAATCCTTTCGATTCTCGGGGGCCTTCACTTTACCGTT CACGTGCATGATTAATGGTG
Product: integral membrane protein
Products: NA
Alternate protein names: UTP-Hexose-1-Phosphate Uridylyltransferase; Integral Membrane Protein; Di-Tripeptide Transporter
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MPNQPLIFDTAIAKDKPENIRHPHNACPFCDPGQLTDIIAQDADRIWLLNKFPTLQATWQTIVIEAARHDGDIATYSSAQ NRAVFTFALKHWQATIASGRFKSVLCYKNFGPHSGGSLRHPHMQIVGLMAADGYANVTAANLTGYSVLAVDQVQVTVSDR PIMGFVEINVAAPATAIAPLADAVQQVVQYTLNTYFHGQCDSYNLFFYPRDDQIVAKVVPLFNVSPYYIGYRLAQADTPK RMRAIAEEIRQQFERSNLAHSN
Sequences:
>Translated_262_residues MPNQPLIFDTAIAKDKPENIRHPHNACPFCDPGQLTDIIAQDADRIWLLNKFPTLQATWQTIVIEAARHDGDIATYSSAQ NRAVFTFALKHWQATIASGRFKSVLCYKNFGPHSGGSLRHPHMQIVGLMAADGYANVTAANLTGYSVLAVDQVQVTVSDR PIMGFVEINVAAPATAIAPLADAVQQVVQYTLNTYFHGQCDSYNLFFYPRDDQIVAKVVPLFNVSPYYIGYRLAQADTPK RMRAIAEEIRQQFERSNLAHSN >Mature_261_residues PNQPLIFDTAIAKDKPENIRHPHNACPFCDPGQLTDIIAQDADRIWLLNKFPTLQATWQTIVIEAARHDGDIATYSSAQN RAVFTFALKHWQATIASGRFKSVLCYKNFGPHSGGSLRHPHMQIVGLMAADGYANVTAANLTGYSVLAVDQVQVTVSDRP IMGFVEINVAAPATAIAPLADAVQQVVQYTLNTYFHGQCDSYNLFFYPRDDQIVAKVVPLFNVSPYYIGYRLAQADTPKR MRAIAEEIRQQFERSNLAHSN
Specific function: Unknown
COG id: COG1085
COG function: function code C; Galactose-1-phosphate uridylyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29153; Mature: 29022
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNQPLIFDTAIAKDKPENIRHPHNACPFCDPGQLTDIIAQDADRIWLLNKFPTLQATWQ CCCCCEEEEEHHCCCCCHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCHHHHE TIVIEAARHDGDIATYSSAQNRAVFTFALKHWQATIASGRFKSVLCYKNFGPHSGGSLRH EEEEEECCCCCCEEEECCCCCCEEEEEEHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC PHMQIVGLMAADGYANVTAANLTGYSVLAVDQVQVTVSDRPIMGFVEINVAAPATAIAPL CCEEEEEEEECCCCCCEEEECCCCEEEEEEEEEEEEECCCCEEEEEEEEECCCHHHHHHH ADAVQQVVQYTLNTYFHGQCDSYNLFFYPRDDQIVAKVVPLFNVSPYYIGYRLAQADTPK HHHHHHHHHHHHHHEECCCCCCEEEEEEECCCCEEEEEHHHCCCCCHHEEEEEECCCCHH RMRAIAEEIRQQFERSNLAHSN HHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PNQPLIFDTAIAKDKPENIRHPHNACPFCDPGQLTDIIAQDADRIWLLNKFPTLQATWQ CCCCEEEEEHHCCCCCHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCHHHHE TIVIEAARHDGDIATYSSAQNRAVFTFALKHWQATIASGRFKSVLCYKNFGPHSGGSLRH EEEEEECCCCCCEEEECCCCCCEEEEEEHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC PHMQIVGLMAADGYANVTAANLTGYSVLAVDQVQVTVSDRPIMGFVEINVAAPATAIAPL CCEEEEEEEECCCCCCEEEECCCCEEEEEEEEEEEEECCCCEEEEEEEEECCCHHHHHHH ADAVQQVVQYTLNTYFHGQCDSYNLFFYPRDDQIVAKVVPLFNVSPYYIGYRLAQADTPK HHHHHHHHHHHHHHEECCCCCCEEEEEEECCCCEEEEEHHHCCCCCHHEEEEEECCCCHH RMRAIAEEIRQQFERSNLAHSN HHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA