Click here to switch to the map view.

The map label for this gene is 28378465

Identifier: 28378465

GI number: 28378465

Start: 1623841

End: 1624602

Strand: Direct

Name: 28378465

Synonym: lp_1792

Alternate gene names: NA

Gene position: 1623841-1624602 (Clockwise)

Preceding gene: 28378464

Following gene: 28378467

Centisome position: 49.08

GC content: 44.49

Gene sequence:

>762_bases
ATGATGACGTTATATCGACAAGAACTCACAAAACTATTTAAGAAGAAGTCTACGATTTGGTGTGGACTAATATTGGCTAC
CGTAGCGCTGATCTTTGCGATTTTGGCGCGGATCAAGCCGACGATTTTTCCCGCCAAAACCATGTTTGCCGCTAATTTTG
AAGCGCAGCAGTTCATCGTCTTCTTTATGGTAGCAGCGGCGGCCACGATGATCACGATGGAATTTCAATTTGGGACGATC
AAGCACGTGTTAACGCAGCGTTATTCACGACCACTTGTTTTGGTTAGTAAGTGGCTCGTGCTGTTAACCTACAGTCTATT
GTTGTATGTCGGTAGCAGTCTGTTTGCCATCTTACTTAAAGTCTGCTTAGTAAATGATAAATTTGCGATCTTTACGCGGG
CCAAGTTTTGGCATGATTGGTTGGCGGGCGTTGGTGGTGAATTTCTCAATACGTGGTTACTGCTAAGTCTAGTGCTGCTA
ATTGCTGCTCTTTTCAAGAGTTCTGGTGCGGCAGTCGCGGTCGGAATCATCGGATACTTTGTTCTGGGAATGGTTAATAT
TCCCATGATCGCACTTATTCGGAAGTATACGTGGCTCAAATGGAACCCACTCAACATGTTCAACTTTTCAGCCCAGTTGG
GATTACCGACGCTGAGTAAAATTACCAATCTCACGGATGTCCAGTTGTTTTGGGGCAATCTTGCATACATTATTTTATTC
TTAGTGTTAGGCCTGCTATTCTTTCGGCGGCGGGAAGTTTGA

Upstream 100 bases:

>100_bases
TCACGGACTGACGGTCAGGGATGTTCGGCATGAGACGGCTGATTTGGAAAGTACGATTTTAAAATTACTGGCGACAACCA
GCGCCTAGGGAGTGGTACTG

Downstream 100 bases:

>100_bases
ACCGTTACTGTTTGAAGCACTGCCAGTAAGTACTAAAAATCGCGCGTCCAGAAATTTTATCTTGGACGCGCGATTTTGTT
GGTTAATGATTGATCACTGC

Product: ABC transporter, permease protein

Products: NA

Alternate protein names: ABC Transporter Permease Protein; Potential Membrane Spanning Protein; ABC-Type Transport System For Multi-Copper Maturation; ABC Transporter Permease

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MMTLYRQELTKLFKKKSTIWCGLILATVALIFAILARIKPTIFPAKTMFAANFEAQQFIVFFMVAAAATMITMEFQFGTI
KHVLTQRYSRPLVLVSKWLVLLTYSLLLYVGSSLFAILLKVCLVNDKFAIFTRAKFWHDWLAGVGGEFLNTWLLLSLVLL
IAALFKSSGAAVAVGIIGYFVLGMVNIPMIALIRKYTWLKWNPLNMFNFSAQLGLPTLSKITNLTDVQLFWGNLAYIILF
LVLGLLFFRRREV

Sequences:

>Translated_253_residues
MMTLYRQELTKLFKKKSTIWCGLILATVALIFAILARIKPTIFPAKTMFAANFEAQQFIVFFMVAAAATMITMEFQFGTI
KHVLTQRYSRPLVLVSKWLVLLTYSLLLYVGSSLFAILLKVCLVNDKFAIFTRAKFWHDWLAGVGGEFLNTWLLLSLVLL
IAALFKSSGAAVAVGIIGYFVLGMVNIPMIALIRKYTWLKWNPLNMFNFSAQLGLPTLSKITNLTDVQLFWGNLAYIILF
LVLGLLFFRRREV
>Mature_253_residues
MMTLYRQELTKLFKKKSTIWCGLILATVALIFAILARIKPTIFPAKTMFAANFEAQQFIVFFMVAAAATMITMEFQFGTI
KHVLTQRYSRPLVLVSKWLVLLTYSLLLYVGSSLFAILLKVCLVNDKFAIFTRAKFWHDWLAGVGGEFLNTWLLLSLVLL
IAALFKSSGAAVAVGIIGYFVLGMVNIPMIALIRKYTWLKWNPLNMFNFSAQLGLPTLSKITNLTDVQLFWGNLAYIILF
LVLGLLFFRRREV

Specific function: Unknown

COG id: COG1277

COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28772; Mature: 28772

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA