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The map label for this gene is 28378467

Identifier: 28378467

GI number: 28378467

Start: 1626911

End: 1627333

Strand: Direct

Name: 28378467

Synonym: lp_1795

Alternate gene names: NA

Gene position: 1626911-1627333 (Clockwise)

Preceding gene: 28378465

Following gene: 28378468

Centisome position: 49.18

GC content: 46.81

Gene sequence:

>423_bases
ATGAAGTCAAGTTTAACGGCCTTAGCGGAAACCGCTAAGTTGCAAACTGCCATGTTGAAAAAAATTACTAAGGCCCAAGG
AATCACCGTTGCGGAATGGCAACTACTGATCCAATTGGCGGCGGGGGCCAATACGCAAGAAAAATTGGCGACAGCTATGC
AGCTTGATACATCTACATTAAGTCGGCAACTGGCTAGCCTAGTCAAGAAAGAACGTTTGAGTAAGGAAGCGATTGGTCGT
GACCGCCGCCAACTCGTTTACACGGTCACGCCGGCAGGAACAGCGGCATTGACCAAGATTAATGCGGATTATCAACAGTT
TGAAGCAGAAGTTTTTGACAAATGGCCACAAGATGAACAAAACCTTCTCCGGATTCTGCTCAATCGGTTAAACAAGTCAG
TTAGCCGAATTCTCGAGCCATGA

Upstream 100 bases:

>100_bases
TCTTTTTGCTTCTAAAAATTGGGACGTTTTTAATCATCAGGCGGGGTAAATCAAGTCACAATGGACCGATGTGAATTATT
GTTGAGAGGAATGAACTGTC

Downstream 100 bases:

>100_bases
CTTTCCAAACGGTCGAAGGTAGAGTATAACTTAGTTTTATGCTATGATATTTGTTATTATTTAAATGAGAAGTAGGTGTA
AGTCATGAAGATTGCTGTTG

Product: transcription regulator

Products: NA

Alternate protein names: MarR Family Transcriptional Regulator; Transcription Regulator

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MKSSLTALAETAKLQTAMLKKITKAQGITVAEWQLLIQLAAGANTQEKLATAMQLDTSTLSRQLASLVKKERLSKEAIGR
DRRQLVYTVTPAGTAALTKINADYQQFEAEVFDKWPQDEQNLLRILLNRLNKSVSRILEP

Sequences:

>Translated_140_residues
MKSSLTALAETAKLQTAMLKKITKAQGITVAEWQLLIQLAAGANTQEKLATAMQLDTSTLSRQLASLVKKERLSKEAIGR
DRRQLVYTVTPAGTAALTKINADYQQFEAEVFDKWPQDEQNLLRILLNRLNKSVSRILEP
>Mature_140_residues
MKSSLTALAETAKLQTAMLKKITKAQGITVAEWQLLIQLAAGANTQEKLATAMQLDTSTLSRQLASLVKKERLSKEAIGR
DRRQLVYTVTPAGTAALTKINADYQQFEAEVFDKWPQDEQNLLRILLNRLNKSVSRILEP

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15611; Mature: 15611

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSLTALAETAKLQTAMLKKITKAQGITVAEWQLLIQLAAGANTQEKLATAMQLDTSTL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
SRQLASLVKKERLSKEAIGRDRRQLVYTVTPAGTAALTKINADYQQFEAEVFDKWPQDEQ
HHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCHHHHHHCCHHHHHHHHHHHCCCCCHH
NLLRILLNRLNKSVSRILEP
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSSLTALAETAKLQTAMLKKITKAQGITVAEWQLLIQLAAGANTQEKLATAMQLDTSTL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
SRQLASLVKKERLSKEAIGRDRRQLVYTVTPAGTAALTKINADYQQFEAEVFDKWPQDEQ
HHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCHHHHHHCCHHHHHHHHHHHCCCCCHH
NLLRILLNRLNKSVSRILEP
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA