Definition | Lactobacillus plantarum WCFS1, complete genome. |
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Accession | NC_004567 |
Length | 3,308,274 |
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The map label for this gene is fhs
Identifier: 28378453
GI number: 28378453
Start: 1610466
End: 1612121
Strand: Direct
Name: fhs
Synonym: lp_1779
Alternate gene names: 28378453
Gene position: 1610466-1612121 (Clockwise)
Preceding gene: 28378452
Following gene: 28378454
Centisome position: 48.68
GC content: 49.52
Gene sequence:
>1656_bases ATGAAGGATATTGAAATTGCACAGCAAGTGACACCAGAACCGATTACGGCGATTGCGGCTAAAGCGGGCTTGACGGTTGA CCAGATCGACCAATATGGGAGCACGAAGGCTAAACTCAAATTACCGTTACCGGTTAAGAAAACTCAACGCAACCTTATTT TAGTAACGTCGATTAACCCGACGCCTGCTGGTGAGGGAAAGTCAACCGTGACTATTGGGTTAGGTGACGCGTTGACTAAG ATTGGTAAGTCAACGATGATTGCATTGCGGGAACCTTCATTAGGACCAGTTATGGGGATGAAGGGTGGCGCCACTGGTGG CGGGTACTCACAAGTGATTCCAATGGAAGATATCAATTTGCACTTCACCGGCGACATGCATGCCCTGACGGCTGCGAACA ACACGCTCGCGGCCTTAATTGACAACCATATTCAACAAGGTAACCAGTTGGGTATCGATCAGCGTCGAATTCAATGGAAG CGCGCGTTGGATATTAATGATCGGGCGCTCCGGCATACGGTGATTGGCCTTGGTGGTGCAACGTCGGGTGTACCTCGTGA AGATGGGTTTGACATTACCGTCGCGAGTGAACTGATGGCCATTCTCTGTCTTTCAGAAAATATTGCGGACTTGAAACAAC GTGTTAATCGAATTGTAATTGGCTACACACATGACCGTCAACCAGTGACAGTTGCTGATTTGAACGTCGGTGGCGCGATC ACGTTACTTTTGAAAGACGCGTTACGTCCAAATTTAGTTCAAACCCTGGCGCATACCCCAGCACTCGTTCATGGTGGTCC GTTCGCCAATATCGCGCATGGTTGTAACAGTGTACTTGCCACGCAAGCTGGATTGAATCTAGCCGACTATACGGTAACCG AGGCGGGCTTCGGTGCTGATTTGGGTGGTCAGAAATTCATGGATATTAACGTGCCAGCGGTCGGACAAGCGCCCAATGCC GTGGTAATCGTGGCGACGATTCGGGCTTTAAAGTTACATGGTGGCGTGGCTTTGCAAGATTTGGCAACCGAAAATGTAGC GGCCTTGAAAGCCGGTGCGGCTAATTTAGGACATCATATCCATGCCATGCAACGTTATGGGGTGCCAGTCGTGGTGGCCA TCAACGAATTTACGGCCGATACTGACGCCGAAATCCATGCCGTCAAAGACTATTGTGCCGATCTTGGAGTCGATGCAGTC TTGGCTGATGTCTGGGGTCGTGGGGGTGACGGGGCAACCGACTTAGCTGCCGCAGTGGTTGATTTATGTGCTCAGCCAAG TCATTTTCAACCGTTATCACCAGCGGATGCGGATCTTAAGACGAAAATCAACGATATTGTCACTAAGACGTATGGTGGAG CCAATGTCGAATATTCAGCGAAAGCTCAGCGCCAATTGAGAACGTTTGCTAAGCAAGGGTGGGATCATTTGCCAGTCTGC ATGGCGAAGACGCAATATTCATTGAGCGATGATCCCAAACGTCTCGGAGCACCAACCGGATTTACAATTAATGTTCGTGA ATTTGTGCCGAAGTTAGGTGCGGGTTTCATTGTCGCTTTGACCGGGAATGTGTTGACGATGCCAGGACTGCCAAAACATC CGGCCGCACTCGATATGGACATTAGTGATGATGGAAAAATCTCAGGTTTGTTCTAA
Upstream 100 bases:
>100_bases TCGATAGATACGAATAAAAACAATCAATATACAAATAATGTTCATAATTTCAGGAAGATTGTTATAATGGAGTAAGTAAA AACAGAAGGGCGGAGAATTG
Downstream 100 bases:
>100_bases AGCTTGACCGATAAGTCGATGCCAGTGGGGGTCGGCTTTTTATTTGCGTTGTTTTTGGAAGACTGCGACAGCGAATCAAT CACACACGTTTAATTTGTGA
Product: formate--tetrahydrofolate ligase
Products: NA
Alternate protein names: Formyltetrahydrofolate synthetase; FHS; FTHFS
Number of amino acids: Translated: 551; Mature: 551
Protein sequence:
>551_residues MKDIEIAQQVTPEPITAIAAKAGLTVDQIDQYGSTKAKLKLPLPVKKTQRNLILVTSINPTPAGEGKSTVTIGLGDALTK IGKSTMIALREPSLGPVMGMKGGATGGGYSQVIPMEDINLHFTGDMHALTAANNTLAALIDNHIQQGNQLGIDQRRIQWK RALDINDRALRHTVIGLGGATSGVPREDGFDITVASELMAILCLSENIADLKQRVNRIVIGYTHDRQPVTVADLNVGGAI TLLLKDALRPNLVQTLAHTPALVHGGPFANIAHGCNSVLATQAGLNLADYTVTEAGFGADLGGQKFMDINVPAVGQAPNA VVIVATIRALKLHGGVALQDLATENVAALKAGAANLGHHIHAMQRYGVPVVVAINEFTADTDAEIHAVKDYCADLGVDAV LADVWGRGGDGATDLAAAVVDLCAQPSHFQPLSPADADLKTKINDIVTKTYGGANVEYSAKAQRQLRTFAKQGWDHLPVC MAKTQYSLSDDPKRLGAPTGFTINVREFVPKLGAGFIVALTGNVLTMPGLPKHPAALDMDISDDGKISGLF
Sequences:
>Translated_551_residues MKDIEIAQQVTPEPITAIAAKAGLTVDQIDQYGSTKAKLKLPLPVKKTQRNLILVTSINPTPAGEGKSTVTIGLGDALTK IGKSTMIALREPSLGPVMGMKGGATGGGYSQVIPMEDINLHFTGDMHALTAANNTLAALIDNHIQQGNQLGIDQRRIQWK RALDINDRALRHTVIGLGGATSGVPREDGFDITVASELMAILCLSENIADLKQRVNRIVIGYTHDRQPVTVADLNVGGAI TLLLKDALRPNLVQTLAHTPALVHGGPFANIAHGCNSVLATQAGLNLADYTVTEAGFGADLGGQKFMDINVPAVGQAPNA VVIVATIRALKLHGGVALQDLATENVAALKAGAANLGHHIHAMQRYGVPVVVAINEFTADTDAEIHAVKDYCADLGVDAV LADVWGRGGDGATDLAAAVVDLCAQPSHFQPLSPADADLKTKINDIVTKTYGGANVEYSAKAQRQLRTFAKQGWDHLPVC MAKTQYSLSDDPKRLGAPTGFTINVREFVPKLGAGFIVALTGNVLTMPGLPKHPAALDMDISDDGKISGLF >Mature_551_residues MKDIEIAQQVTPEPITAIAAKAGLTVDQIDQYGSTKAKLKLPLPVKKTQRNLILVTSINPTPAGEGKSTVTIGLGDALTK IGKSTMIALREPSLGPVMGMKGGATGGGYSQVIPMEDINLHFTGDMHALTAANNTLAALIDNHIQQGNQLGIDQRRIQWK RALDINDRALRHTVIGLGGATSGVPREDGFDITVASELMAILCLSENIADLKQRVNRIVIGYTHDRQPVTVADLNVGGAI TLLLKDALRPNLVQTLAHTPALVHGGPFANIAHGCNSVLATQAGLNLADYTVTEAGFGADLGGQKFMDINVPAVGQAPNA VVIVATIRALKLHGGVALQDLATENVAALKAGAANLGHHIHAMQRYGVPVVVAINEFTADTDAEIHAVKDYCADLGVDAV LADVWGRGGDGATDLAAAVVDLCAQPSHFQPLSPADADLKTKINDIVTKTYGGANVEYSAKAQRQLRTFAKQGWDHLPVC MAKTQYSLSDDPKRLGAPTGFTINVREFVPKLGAGFIVALTGNVLTMPGLPKHPAALDMDISDDGKISGLF
Specific function: Unknown
COG id: COG2759
COG function: function code F; Formyltetrahydrofolate synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the formate--tetrahydrofolate ligase family
Homologues:
Organism=Homo sapiens, GI36796743, Length=617, Percent_Identity=43.5980551053485, Blast_Score=434, Evalue=1e-121, Organism=Homo sapiens, GI222136639, Length=617, Percent_Identity=40.3565640194489, Blast_Score=425, Evalue=1e-119, Organism=Homo sapiens, GI310124614, Length=85, Percent_Identity=36.4705882352941, Blast_Score=68, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17568737, Length=621, Percent_Identity=42.3510466988728, Blast_Score=421, Evalue=1e-118, Organism=Caenorhabditis elegans, GI17568739, Length=621, Percent_Identity=42.3510466988728, Blast_Score=421, Evalue=1e-118, Organism=Saccharomyces cerevisiae, GI6319558, Length=629, Percent_Identity=40.6995230524642, Blast_Score=439, Evalue=1e-124, Organism=Saccharomyces cerevisiae, GI6321643, Length=625, Percent_Identity=42.56, Blast_Score=433, Evalue=1e-122, Organism=Drosophila melanogaster, GI62472483, Length=617, Percent_Identity=40.8427876823339, Blast_Score=426, Evalue=1e-119, Organism=Drosophila melanogaster, GI45551871, Length=617, Percent_Identity=40.8427876823339, Blast_Score=426, Evalue=1e-119, Organism=Drosophila melanogaster, GI24645718, Length=617, Percent_Identity=40.8427876823339, Blast_Score=426, Evalue=1e-119, Organism=Drosophila melanogaster, GI17137370, Length=617, Percent_Identity=40.8427876823339, Blast_Score=426, Evalue=1e-119,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FTHS_LACPL (Q88W76)
Other databases:
- EMBL: AL935257 - RefSeq: NP_785345.1 - ProteinModelPortal: Q88W76 - SMR: Q88W76 - GeneID: 1064084 - GenomeReviews: AL935263_GR - KEGG: lpl:lp_1779 - NMPDR: fig|220668.1.peg.1479 - HOGENOM: HBG677721 - OMA: EIMAVLC - ProtClustDB: PRK13505 - BioCyc: LPLA220668:LP_1779-MONOMER - BRENDA: 6.3.4.3 - HAMAP: MF_01543 - InterPro: IPR000559 - InterPro: IPR020628
Pfam domain/function: PF01268 FTHFS
EC number: =6.3.4.3
Molecular weight: Translated: 57937; Mature: 57937
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: PS00721 FTHFS_1; PS00722 FTHFS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDIEIAQQVTPEPITAIAAKAGLTVDQIDQYGSTKAKLKLPLPVKKTQRNLILVTSINP CCCHHHHHHCCCCHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEECCC TPAGEGKSTVTIGLGDALTKIGKSTMIALREPSLGPVMGMKGGATGGGYSQVIPMEDINL CCCCCCCCEEEEECCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEE HFTGDMHALTAANNTLAALIDNHIQQGNQLGIDQRRIQWKRALDINDRALRHTVIGLGGA EECCCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHEEEEECCCC TSGVPREDGFDITVASELMAILCLSENIADLKQRVNRIVIGYTHDRQPVTVADLNVGGAI CCCCCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHCEEEEEEECCCCCEEEEECCCCCEE TLLLKDALRPNLVQTLAHTPALVHGGPFANIAHGCNSVLATQAGLNLADYTVTEAGFGAD EEEEHHHCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCC LGGQKFMDINVPAVGQAPNAVVIVATIRALKLHGGVALQDLATENVAALKAGAANLGHHI CCCCEEEEECCCCCCCCCCCEEEEEEEEEHHHCCCEEEHHHHCCCHHHHHCCCHHHHHHH HAMQRYGVPVVVAINEFTADTDAEIHAVKDYCADLGVDAVLADVWGRGGDGATDLAAAVV HHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHH DLCAQPSHFQPLSPADADLKTKINDIVTKTYGGANVEYSAKAQRQLRTFAKQGWDHLPVC HHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCCCCCCEE MAKTQYSLSDDPKRLGAPTGFTINVREFVPKLGAGFIVALTGNVLTMPGLPKHPAALDMD EECCCCCCCCCHHHHCCCCCCEEEHHHHHHHCCCCEEEEEECCEEECCCCCCCCCEEEEC ISDDGKISGLF CCCCCCEECCC >Mature Secondary Structure MKDIEIAQQVTPEPITAIAAKAGLTVDQIDQYGSTKAKLKLPLPVKKTQRNLILVTSINP CCCHHHHHHCCCCHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEECCC TPAGEGKSTVTIGLGDALTKIGKSTMIALREPSLGPVMGMKGGATGGGYSQVIPMEDINL CCCCCCCCEEEEECCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEE HFTGDMHALTAANNTLAALIDNHIQQGNQLGIDQRRIQWKRALDINDRALRHTVIGLGGA EECCCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHEEEEECCCC TSGVPREDGFDITVASELMAILCLSENIADLKQRVNRIVIGYTHDRQPVTVADLNVGGAI CCCCCCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHCEEEEEEECCCCCEEEEECCCCCEE TLLLKDALRPNLVQTLAHTPALVHGGPFANIAHGCNSVLATQAGLNLADYTVTEAGFGAD EEEEHHHCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCC LGGQKFMDINVPAVGQAPNAVVIVATIRALKLHGGVALQDLATENVAALKAGAANLGHHI CCCCEEEEECCCCCCCCCCCEEEEEEEEEHHHCCCEEEHHHHCCCHHHHHCCCHHHHHHH HAMQRYGVPVVVAINEFTADTDAEIHAVKDYCADLGVDAVLADVWGRGGDGATDLAAAVV HHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHH DLCAQPSHFQPLSPADADLKTKINDIVTKTYGGANVEYSAKAQRQLRTFAKQGWDHLPVC HHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCCCCCCEE MAKTQYSLSDDPKRLGAPTGFTINVREFVPKLGAGFIVALTGNVLTMPGLPKHPAALDMD EECCCCCCCCCHHHHCCCCCCEEEHHHHHHHCCCCEEEEEECCEEECCCCCCCCCEEEEC ISDDGKISGLF CCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12566566