Click here to switch to the map view.

The map label for this gene is esbA

Identifier: 28378452

GI number: 28378452

Start: 1609986

End: 1610372

Strand: Direct

Name: esbA

Synonym: lp_1778

Alternate gene names: NA

Gene position: 1609986-1610372 (Clockwise)

Preceding gene: 28378450

Following gene: 28378453

Centisome position: 48.67

GC content: 43.93

Gene sequence:

>387_bases
GTGAATAACGATAAGCATACCTTTAAATACCAACCAATGCTAGCGTCAAGTGTGATCGTCTGGTCGTGGACGGCACTAGT
ATTGATGGCGGGGATTATTTTGTGGCTAGAAATCTTGAAGTTTAAGTGGTGGTTACTCGTCATTGCGGCGCTCTTTATTG
CCTTGGTCGCGATTCAAATCAGCTTGCGGCGCGTAACAATCAATCATAACCTCATTATTTTTAGCACGGTCTTGAACCAT
TCTTGGCTTGTGATTCCCCGTGATCAACTCGAATTGATCGTCCCGATACGCGGTGGGTTGAAAGTTCAAATCGATGGTAA
TCAATATCGGTTTTTGATGTTGAAAAAGGCGCGCAATCAGTTGATTGACCTAGCAACTAGTCGATAG

Upstream 100 bases:

>100_bases
AATTAAGATTCCCGCGGCACTGCGCTGATTATCGGGTGTGGTCGCGGCATCCGTATATAATTGCATCAAACTCACTCCAA
TGTGAAAGGAATTTTGTACT

Downstream 100 bases:

>100_bases
ATACGAATAAAAACAATCAATATACAAATAATGTTCATAATTTCAGGAAGATTGTTATAATGGAGTAAGTAAAAACAGAA
GGGCGGAGAATTGATGAAGG

Product: pore-forming protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MNNDKHTFKYQPMLASSVIVWSWTALVLMAGIILWLEILKFKWWLLVIAALFIALVAIQISLRRVTINHNLIIFSTVLNH
SWLVIPRDQLELIVPIRGGLKVQIDGNQYRFLMLKKARNQLIDLATSR

Sequences:

>Translated_128_residues
MNNDKHTFKYQPMLASSVIVWSWTALVLMAGIILWLEILKFKWWLLVIAALFIALVAIQISLRRVTINHNLIIFSTVLNH
SWLVIPRDQLELIVPIRGGLKVQIDGNQYRFLMLKKARNQLIDLATSR
>Mature_128_residues
MNNDKHTFKYQPMLASSVIVWSWTALVLMAGIILWLEILKFKWWLLVIAALFIALVAIQISLRRVTINHNLIIFSTVLNH
SWLVIPRDQLELIVPIRGGLKVQIDGNQYRFLMLKKARNQLIDLATSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14863; Mature: 14863

Theoretical pI: Translated: 11.16; Mature: 11.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNDKHTFKYQPMLASSVIVWSWTALVLMAGIILWLEILKFKWWLLVIAALFIALVAIQI
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLRRVTINHNLIIFSTVLNHSWLVIPRDQLELIVPIRGGLKVQIDGNQYRFLMLKKARNQ
HEEEEEECCCEEEEEEECCCCEEEEECCCEEEEEEECCCEEEEECCCEEEEEEEHHHHHH
LIDLATSR
HHHHCCCC
>Mature Secondary Structure
MNNDKHTFKYQPMLASSVIVWSWTALVLMAGIILWLEILKFKWWLLVIAALFIALVAIQI
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLRRVTINHNLIIFSTVLNHSWLVIPRDQLELIVPIRGGLKVQIDGNQYRFLMLKKARNQ
HEEEEEECCCEEEEEEECCCCEEEEECCCEEEEEEECCCEEEEECCCEEEEEEEHHHHHH
LIDLATSR
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA