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The map label for this gene is yurR [H]

Identifier: 28378450

GI number: 28378450

Start: 1608462

End: 1609568

Strand: Direct

Name: yurR [H]

Synonym: lp_1776

Alternate gene names: 28378450

Gene position: 1608462-1609568 (Clockwise)

Preceding gene: 28378449

Following gene: 28378452

Centisome position: 48.62

GC content: 48.24

Gene sequence:

>1107_bases
ATGCAAAAACAAGTAACGATTATTGGTAGTGGCATTGTTGGGGCGGTCACGGCGTACTATTTAAGCCAGAACCCTGACCT
GAACGTCACGATTTATGATGAAGGTATTGGTCAAGCGACTAAGAATTCAGCAGGGATTATTTCACCTTGGTTATCCAAAC
GTCGTAATCAGCGTTGGTATCAACTCGCTAAGGCCGGGGCTGCTTTGTATCCGGAAATTGTTGCGGACACGCAAATGGGC
TATTCTGTTTATCAACAAGCAGGAACGATTGTGACTCGTGCCGATCCAGATGATCTGCAGGCGCTATACGATTTAGCTCT
AAAGCGCCGGCAAGCGGCACCCCAGATGGGAACGATTGAGAAATTAACTGCTGAAGAAGTTCAAGAACGGATCCCACTGC
TAACGGCGCCCCAACCCGGTGTGTTTGTGAGTGGTGGTGCGCGGGTCGATGGCGATAAGTTTGCACATAATTTACTGAAA
TACGCTGAAAAGCGGAACCTGGTCCGTCATAAAGGTAAGGTACGTTTAGGTGACCAGGGCCAACTATTGACGGTTAATGG
TCAGCAAAGCTATGACACGTTGATTTTAGCAGTCGGGGCGTGGCTAAAGCCGTTATTGTTGCCAATGAAGATTGTTGCTG
ATGTTCGGCCACAAAAAGGGCAGTTGATTGAAATGCAGCTGCCTGAGACTTGGGCTGACGATGTTCCAGTGCTCATGCCT
GAAGGTGAACGAGACTTTATTCCCTTTACGCGCAGCAAATTGGTCGTCGGGGCGACGCACGAAAATGATCAGGGCTACGA
TTTGCAGGTTTCAAGTCTGGTTGAAGATGATCTCTTTGCTAGCGGGCTCAAACTTGATGCCAACCTGACTAAGGATCAAA
TTACGCAGGTAAAAGTGGGTACGCGTGCCTACACGCGTGACTTTGCGCCGTTCTTCGGTCCAATTCCGGATAACCCACAT
ATTTTGGTAGCTAGCGGGTTAGGTTCATCTGGTTTAACAACAGGACCCATGATTGGTAAGTTGTTAGCCGATTATGTTCA
AACTGGTGCTCATGACTGGGACCAGTATCAACGACCAATTGAAACTTATTTGGCCCCGGCTGATTAG

Upstream 100 bases:

>100_bases
CATCTACCAATGGTCTGACTTTAATCCAACTGAATCAGCCACCCGCAACAAATTCGAGTATGCTAAAATGAAAGCAGATT
GGTTGTGGAGGCGTTGGAAA

Downstream 100 bases:

>100_bases
TCACTAAGATGTAAGCCTTGTTGTGCTAATTGATGGGCGCCATGGTTATCACTTTCGGCAATCCACTGGGTGATTACTAA
TTGGCACTGGTCTTGCAGGT

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MQKQVTIIGSGIVGAVTAYYLSQNPDLNVTIYDEGIGQATKNSAGIISPWLSKRRNQRWYQLAKAGAALYPEIVADTQMG
YSVYQQAGTIVTRADPDDLQALYDLALKRRQAAPQMGTIEKLTAEEVQERIPLLTAPQPGVFVSGGARVDGDKFAHNLLK
YAEKRNLVRHKGKVRLGDQGQLLTVNGQQSYDTLILAVGAWLKPLLLPMKIVADVRPQKGQLIEMQLPETWADDVPVLMP
EGERDFIPFTRSKLVVGATHENDQGYDLQVSSLVEDDLFASGLKLDANLTKDQITQVKVGTRAYTRDFAPFFGPIPDNPH
ILVASGLGSSGLTTGPMIGKLLADYVQTGAHDWDQYQRPIETYLAPAD

Sequences:

>Translated_368_residues
MQKQVTIIGSGIVGAVTAYYLSQNPDLNVTIYDEGIGQATKNSAGIISPWLSKRRNQRWYQLAKAGAALYPEIVADTQMG
YSVYQQAGTIVTRADPDDLQALYDLALKRRQAAPQMGTIEKLTAEEVQERIPLLTAPQPGVFVSGGARVDGDKFAHNLLK
YAEKRNLVRHKGKVRLGDQGQLLTVNGQQSYDTLILAVGAWLKPLLLPMKIVADVRPQKGQLIEMQLPETWADDVPVLMP
EGERDFIPFTRSKLVVGATHENDQGYDLQVSSLVEDDLFASGLKLDANLTKDQITQVKVGTRAYTRDFAPFFGPIPDNPH
ILVASGLGSSGLTTGPMIGKLLADYVQTGAHDWDQYQRPIETYLAPAD
>Mature_368_residues
MQKQVTIIGSGIVGAVTAYYLSQNPDLNVTIYDEGIGQATKNSAGIISPWLSKRRNQRWYQLAKAGAALYPEIVADTQMG
YSVYQQAGTIVTRADPDDLQALYDLALKRRQAAPQMGTIEKLTAEEVQERIPLLTAPQPGVFVSGGARVDGDKFAHNLLK
YAEKRNLVRHKGKVRLGDQGQLLTVNGQQSYDTLILAVGAWLKPLLLPMKIVADVRPQKGQLIEMQLPETWADDVPVLMP
EGERDFIPFTRSKLVVGATHENDQGYDLQVSSLVEDDLFASGLKLDANLTKDQITQVKVGTRAYTRDFAPFFGPIPDNPH
ILVASGLGSSGLTTGPMIGKLLADYVQTGAHDWDQYQRPIETYLAPAD

Specific function: Unknown

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: NA

Molecular weight: Translated: 40390; Mature: 40390

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKQVTIIGSGIVGAVTAYYLSQNPDLNVTIYDEGIGQATKNSAGIISPWLSKRRNQRWY
CCCEEEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHCHHHH
QLAKAGAALYPEIVADTQMGYSVYQQAGTIVTRADPDDLQALYDLALKRRQAAPQMGTIE
HHHHCCCHHCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCHH
KLTAEEVQERIPLLTAPQPGVFVSGGARVDGDKFAHNLLKYAEKRNLVRHKGKVRLGDQG
HHHHHHHHHHCCEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCC
QLLTVNGQQSYDTLILAVGAWLKPLLLPMKIVADVRPQKGQLIEMQLPETWADDVPVLMP
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEC
EGERDFIPFTRSKLVVGATHENDQGYDLQVSSLVEDDLFASGLKLDANLTKDQITQVKVG
CCCCCCCCCCCCEEEEEECCCCCCCCCEEHHHHHHHHHHHCCCEECCCCCHHHHHEEEEC
TRAYTRDFAPFFGPIPDNPHILVASGLGSSGLTTGPMIGKLLADYVQTGAHDWDQYQRPI
CHHHHHCCCHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH
ETYLAPAD
HHHCCCCC
>Mature Secondary Structure
MQKQVTIIGSGIVGAVTAYYLSQNPDLNVTIYDEGIGQATKNSAGIISPWLSKRRNQRWY
CCCEEEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHCHHHH
QLAKAGAALYPEIVADTQMGYSVYQQAGTIVTRADPDDLQALYDLALKRRQAAPQMGTIE
HHHHCCCHHCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCHH
KLTAEEVQERIPLLTAPQPGVFVSGGARVDGDKFAHNLLKYAEKRNLVRHKGKVRLGDQG
HHHHHHHHHHCCEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCC
QLLTVNGQQSYDTLILAVGAWLKPLLLPMKIVADVRPQKGQLIEMQLPETWADDVPVLMP
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEC
EGERDFIPFTRSKLVVGATHENDQGYDLQVSSLVEDDLFASGLKLDANLTKDQITQVKVG
CCCCCCCCCCCCEEEEEECCCCCCCCCEEHHHHHHHHHHHCCCEECCCCCHHHHHEEEEC
TRAYTRDFAPFFGPIPDNPHILVASGLGSSGLTTGPMIGKLLADYVQTGAHDWDQYQRPI
CHHHHHCCCHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH
ETYLAPAD
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]