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The map label for this gene is 28377672

Identifier: 28377672

GI number: 28377672

Start: 763644

End: 764315

Strand: Direct

Name: 28377672

Synonym: lp_0823

Alternate gene names: NA

Gene position: 763644-764315 (Clockwise)

Preceding gene: 28377671

Following gene: 28377673

Centisome position: 23.08

GC content: 41.82

Gene sequence:

>672_bases
ATGGTCATGCTGAAATATAAATATTTTGCACAGCCAATTAATAACCTTGGAACCAACCGAACAATCTTGTATGAGTTATT
ATTACGACAGTGGGATGAGAGGCAACAAACTTGGCGAATACCAGCGACCTTTGAAATAGCGCCAACAGAATTGATTCAAT
TGCTGGATTGCGCTATTCAGGAATTAAATAACCATCATGTTTCCATCAATTTAACGGCGCGTCAGTTTGCTAATCCTGAC
TTTCAAGCTGCAATTAGTCACTATGTGCAGACGCATTTGTTACCACGAGAACTAACTGTTGAGCTAGTTGCGACACCTGA
GCTAAGTGAGTTACAGCAATTAAGTGTTGGGTACCGGGCAGCTGGTATATTACTTGCTTTTGATGATGTTGGTTCTGATA
ACCTATTCCAACAGATCAAAATGATGTTGCCATATGTGAATACGGTTAAATTCGCGTTACAAAATATGCGACCGCTGGGG
ACCCCAACTACGGATGCAATTGTTTCGACGCTCAAATTTTGGTTTGATAAGGCGGAGGAACAGCAAATGCTATTTACCTT
TGAAGGCATTGAATCAGCGGCTGATGTTCAACTGGCTAATCATCTAGGCATTACGCGAGGGCAAGGATATTATTTTGCCA
AACCGCAACTACCCGCGACATTTATGGCATGA

Upstream 100 bases:

>100_bases
ACTAATATTCATAAGACTATTGTGAAAGTTGATGATCTTTTGGTATGATAAAGTAAGCGGTTGCGATAACACAACTAAAT
AATTAGACTATTGGGGATGA

Downstream 100 bases:

>100_bases
CAATAGTGGTATGCTACAATAGTATTCGTAGCAATGTAACTGAGTGTCATGTTGATGTTTAATCGGCTGAATCACATGAC
GAGACGAGGCCGATTTTGTT

Product: diguanylate cyclase/phosphodiesterase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MVMLKYKYFAQPINNLGTNRTILYELLLRQWDERQQTWRIPATFEIAPTELIQLLDCAIQELNNHHVSINLTARQFANPD
FQAAISHYVQTHLLPRELTVELVATPELSELQQLSVGYRAAGILLAFDDVGSDNLFQQIKMMLPYVNTVKFALQNMRPLG
TPTTDAIVSTLKFWFDKAEEQQMLFTFEGIESAADVQLANHLGITRGQGYYFAKPQLPATFMA

Sequences:

>Translated_223_residues
MVMLKYKYFAQPINNLGTNRTILYELLLRQWDERQQTWRIPATFEIAPTELIQLLDCAIQELNNHHVSINLTARQFANPD
FQAAISHYVQTHLLPRELTVELVATPELSELQQLSVGYRAAGILLAFDDVGSDNLFQQIKMMLPYVNTVKFALQNMRPLG
TPTTDAIVSTLKFWFDKAEEQQMLFTFEGIESAADVQLANHLGITRGQGYYFAKPQLPATFMA
>Mature_223_residues
MVMLKYKYFAQPINNLGTNRTILYELLLRQWDERQQTWRIPATFEIAPTELIQLLDCAIQELNNHHVSINLTARQFANPD
FQAAISHYVQTHLLPRELTVELVATPELSELQQLSVGYRAAGILLAFDDVGSDNLFQQIKMMLPYVNTVKFALQNMRPLG
TPTTDAIVSTLKFWFDKAEEQQMLFTFEGIESAADVQLANHLGITRGQGYYFAKPQLPATFMA

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25456; Mature: 25456

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMLKYKYFAQPINNLGTNRTILYELLLRQWDERQQTWRIPATFEIAPTELIQLLDCAIQ
CEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEECCEEEEECHHHHHHHHHHHHH
ELNNHHVSINLTARQFANPDFQAAISHYVQTHLLPRELTVELVATPELSELQQLSVGYRA
HHCCCEEEEEEEHHHHCCCCHHHHHHHHHHHHCCCHHHEEEEEECCCHHHHHHHHCCHHH
AGILLAFDDVGSDNLFQQIKMMLPYVNTVKFALQNMRPLGTPTTDAIVSTLKFWFDKAEE
EEEEEEECCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCC
QQMLFTFEGIESAADVQLANHLGITRGQGYYFAKPQLPATFMA
CEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEECCCCCHHCCC
>Mature Secondary Structure
MVMLKYKYFAQPINNLGTNRTILYELLLRQWDERQQTWRIPATFEIAPTELIQLLDCAIQ
CEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEECCEEEEECHHHHHHHHHHHHH
ELNNHHVSINLTARQFANPDFQAAISHYVQTHLLPRELTVELVATPELSELQQLSVGYRA
HHCCCEEEEEEEHHHHCCCCHHHHHHHHHHHHCCCHHHEEEEEECCCHHHHHHHHCCHHH
AGILLAFDDVGSDNLFQQIKMMLPYVNTVKFALQNMRPLGTPTTDAIVSTLKFWFDKAEE
EEEEEEECCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCC
QQMLFTFEGIESAADVQLANHLGITRGQGYYFAKPQLPATFMA
CEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEECCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA