| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is mviM [H]
Identifier: 28377663
GI number: 28377663
Start: 752170
End: 753072
Strand: Direct
Name: mviM [H]
Synonym: lp_0813
Alternate gene names: 28377663
Gene position: 752170-753072 (Clockwise)
Preceding gene: 28377660
Following gene: 28377664
Centisome position: 22.74
GC content: 48.95
Gene sequence:
>903_bases ATGTTAAAAATTGGGGTCATTGGTTTAGGTAACATTGCTCAAAAGGCGTATTTACCCGTCATGGCGGCGATGCAAGACCA GTATGAATTTCATCTAACGACGCGTAATCCGGAAAAGCGAGCACAACTAGCGACGATGTATGGGTTTCAACACACCCATG CGACCCTTGAGGAATTAATGGCAGTTAAACCGGCGGCCGTATTTGTGCATACTCCCACGGACACGCATGCAGCAATCATC AAGCAGTTGTTATTAGCTGGGATTCACGTTTATGTCGATAAGCCAGTCGCGACTGATCTTCAGGTGGTCCAAAGTTTGTA TGATTTGGCTGCGGCGCGGCACCTGTTATTGACTTGTGGGTTTAATCGGCGTTTTGCTCCTTTTAATCAGCAATTGAAGG CATTGCCTGACAAACGGATGTTAGTGGCTGAAAAAGTTCGCGAAGTGGGTAGTCAAGATCCTGAAACGGCGGTTTTCGAC CTGATGATCCACATGGTCGATACGGGGCTATTCTTGTTAGATGAACCACTTGAACACACTAGTGGTCGGTTGACGACGAC GGCAACTGGCGCGTTGGCGCAAGGCTATTTGACGGTGCAGACGGCTCATGAGCAATTAGAAGTTATCACGAATATGTACG GTGGGGTCAATCTGGAACAAGTGACAGTCCAAACGACGGGGCAACGTGCGTCTGTGACTGATTTAAGTACTAAAACCGTG ATGACGACGGCAACAACTACCACGACGGCTTTTCCGGATTGGACACCGACATTGGAAAAGCGAGGATTTGCACCGCTGAT CCGTGCTTTTCTGACGGCGGTAACAACGCACGGGCCTAATCCAGTCGACCCAACTGGCGCAATTACCAGTCACGCGGTGT GCCGTCATTTATTAAGTGATTAA
Upstream 100 bases:
>100_bases TCACTGGCATGAATTGGACGCTGAATGATTTAAATCAGTGTGCCACGGAGCAATCAGTAGTAGCTAAAAGAAGATTGATG ATAAAATTGGAGGAATATCG
Downstream 100 bases:
>100_bases AAAGTGCTAAAATTAACTGATAGGCTTACAAATTTCAACCTGATTATATCGTTTCAATAGCGTTTCAATGCTGCGGTGCT TGATACGTCGGCCTAAATTA
Product: oxidoreductase (putative)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MLKIGVIGLGNIAQKAYLPVMAAMQDQYEFHLTTRNPEKRAQLATMYGFQHTHATLEELMAVKPAAVFVHTPTDTHAAII KQLLLAGIHVYVDKPVATDLQVVQSLYDLAAARHLLLTCGFNRRFAPFNQQLKALPDKRMLVAEKVREVGSQDPETAVFD LMIHMVDTGLFLLDEPLEHTSGRLTTTATGALAQGYLTVQTAHEQLEVITNMYGGVNLEQVTVQTTGQRASVTDLSTKTV MTTATTTTTAFPDWTPTLEKRGFAPLIRAFLTAVTTHGPNPVDPTGAITSHAVCRHLLSD
Sequences:
>Translated_300_residues MLKIGVIGLGNIAQKAYLPVMAAMQDQYEFHLTTRNPEKRAQLATMYGFQHTHATLEELMAVKPAAVFVHTPTDTHAAII KQLLLAGIHVYVDKPVATDLQVVQSLYDLAAARHLLLTCGFNRRFAPFNQQLKALPDKRMLVAEKVREVGSQDPETAVFD LMIHMVDTGLFLLDEPLEHTSGRLTTTATGALAQGYLTVQTAHEQLEVITNMYGGVNLEQVTVQTTGQRASVTDLSTKTV MTTATTTTTAFPDWTPTLEKRGFAPLIRAFLTAVTTHGPNPVDPTGAITSHAVCRHLLSD >Mature_300_residues MLKIGVIGLGNIAQKAYLPVMAAMQDQYEFHLTTRNPEKRAQLATMYGFQHTHATLEELMAVKPAAVFVHTPTDTHAAII KQLLLAGIHVYVDKPVATDLQVVQSLYDLAAARHLLLTCGFNRRFAPFNQQLKALPDKRMLVAEKVREVGSQDPETAVFD LMIHMVDTGLFLLDEPLEHTSGRLTTTATGALAQGYLTVQTAHEQLEVITNMYGGVNLEQVTVQTTGQRASVTDLSTKTV MTTATTTTTAFPDWTPTLEKRGFAPLIRAFLTAVTTHGPNPVDPTGAITSHAVCRHLLSD
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli mviM [H]
Homologues:
Organism=Escherichia coli, GI1787307, Length=276, Percent_Identity=34.0579710144928, Blast_Score=134, Evalue=9e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000683 - InterPro: IPR004104 [H]
Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]
EC number: NA
Molecular weight: Translated: 32814; Mature: 32814
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKIGVIGLGNIAQKAYLPVMAAMQDQYEFHLTTRNPEKRAQLATMYGFQHTHATLEELM CEEEEEEECCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHH AVKPAAVFVHTPTDTHAAIIKQLLLAGIHVYVDKPVATDLQVVQSLYDLAAARHLLLTCG HCCCCEEEEECCCCHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHEEC FNRRFAPFNQQLKALPDKRMLVAEKVREVGSQDPETAVFDLMIHMVDTGLFLLDEPLEHT CCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHEECCCHHHC SGRLTTTATGALAQGYLTVQTAHEQLEVITNMYGGVNLEQVTVQTTGQRASVTDLSTKTV CCCEEEEECHHHHHCEEEEHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEECCCCCEE MTTATTTTTAFPDWTPTLEKRGFAPLIRAFLTAVTTHGPNPVDPTGAITSHAVCRHLLSD EEEECCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MLKIGVIGLGNIAQKAYLPVMAAMQDQYEFHLTTRNPEKRAQLATMYGFQHTHATLEELM CEEEEEEECCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHH AVKPAAVFVHTPTDTHAAIIKQLLLAGIHVYVDKPVATDLQVVQSLYDLAAARHLLLTCG HCCCCEEEEECCCCHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHEEC FNRRFAPFNQQLKALPDKRMLVAEKVREVGSQDPETAVFDLMIHMVDTGLFLLDEPLEHT CCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHEECCCHHHC SGRLTTTATGALAQGYLTVQTAHEQLEVITNMYGGVNLEQVTVQTTGQRASVTDLSTKTV CCCEEEEECHHHHHCEEEEHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEECCCCCEE MTTATTTTTAFPDWTPTLEKRGFAPLIRAFLTAVTTHGPNPVDPTGAITSHAVCRHLLSD EEEECCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8200538; 11677609 [H]