| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is murB
Identifier: 28377664
GI number: 28377664
Start: 753244
End: 754152
Strand: Direct
Name: murB
Synonym: lp_0814
Alternate gene names: 28377664
Gene position: 753244-754152 (Clockwise)
Preceding gene: 28377663
Following gene: 28377665
Centisome position: 22.77
GC content: 46.2
Gene sequence:
>909_bases ATGACCAAAGATGTCTTGGCCACTTTTCCAGCCATCGAAATTAAAAAAAATGAATCACTAAGTCATTATACGAATACTAA AACAGGCGGTCCCGCCGATTACGTTCGCTTTCCAAAGTCAATCAGCGAGACGAAAGCTCTGATTACGTTTGCCAATGAGC AAAATTTACCACTAACCGTGATTGGTAATGCCAGTAATTTGATTGTCAAAGATGGTGGTATCCGTGGATTAACGATCATT CTCACCCGCATGAAGCAAATTCATGCGAGTGGCACCAAAGTTGTTGCTGAAGCTGGTGCCGCAATTATTGCGACGACTAA GGTTGCTTGTGGCGCTAGCTTGACTGGTCTCGAATTCGCAGCTGGGATTCCCGGTAGTGTCGGGGGTGCGATTTTCATGA ATGCTGGTGCGTACGGCGGCGAAATGAGTGAAGTTGTTGAAACGGTGACGGTTTTGACGCCAGCGGGTCAGCTTAAAACC CTGGATCATGACGAATTAGATTTTGGCTATCGGCACAGTACGATCCAGGACTATGATGATATTGTCGTATCGGTGACGTT TGGTCTCAAGCCAGGTAATCAGACCAAGATTCAAGCGCGGATGGACGAATTGAATACGTTGCGAGCAGCCAAACAACCGT TGGAATGGCCATCATGCGGGAGTGTTTTTAAGCGACCAACTGGGTATTTTACTGGTAAACTGATTCATGATGCTGGCTTA CAGGGCCATCGAATCGGTGGTGCTGAAGTTTCTAAGAAACACGCGGGTTTTATTATCAATGTCGATCACGCTACAGCGAC CGATTATATGGATATGATTCACTACGTCCAGAAAGTTGTATTTGAACGGTTTGGCGTCCATCTTCAGACGGAAGTCCGAA TCATTGGTGAAGACGTCGTTCAAGGTTAG
Upstream 100 bases:
>100_bases TGCGGTGCTTGATACGTCGGCCTAAATTAAAAACGCTATGCGGTTAAAGTGATTATTAACGTAAGTGAATTAAATCGAAA CACGAAAGGAACTTTTCACC
Downstream 100 bases:
>100_bases TTATGTCAATTTAACAAAGGGGGCAACCACTAGATGCCGATTATCGAATTAGTGATTTTACTGGCATGTTTAGTGCTGCT GTCGAATGTATTGAGCCACT
Product: UDP-N-acetylenolpyruvoylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MTKDVLATFPAIEIKKNESLSHYTNTKTGGPADYVRFPKSISETKALITFANEQNLPLTVIGNASNLIVKDGGIRGLTII LTRMKQIHASGTKVVAEAGAAIIATTKVACGASLTGLEFAAGIPGSVGGAIFMNAGAYGGEMSEVVETVTVLTPAGQLKT LDHDELDFGYRHSTIQDYDDIVVSVTFGLKPGNQTKIQARMDELNTLRAAKQPLEWPSCGSVFKRPTGYFTGKLIHDAGL QGHRIGGAEVSKKHAGFIINVDHATATDYMDMIHYVQKVVFERFGVHLQTEVRIIGEDVVQG
Sequences:
>Translated_302_residues MTKDVLATFPAIEIKKNESLSHYTNTKTGGPADYVRFPKSISETKALITFANEQNLPLTVIGNASNLIVKDGGIRGLTII LTRMKQIHASGTKVVAEAGAAIIATTKVACGASLTGLEFAAGIPGSVGGAIFMNAGAYGGEMSEVVETVTVLTPAGQLKT LDHDELDFGYRHSTIQDYDDIVVSVTFGLKPGNQTKIQARMDELNTLRAAKQPLEWPSCGSVFKRPTGYFTGKLIHDAGL QGHRIGGAEVSKKHAGFIINVDHATATDYMDMIHYVQKVVFERFGVHLQTEVRIIGEDVVQG >Mature_301_residues TKDVLATFPAIEIKKNESLSHYTNTKTGGPADYVRFPKSISETKALITFANEQNLPLTVIGNASNLIVKDGGIRGLTIIL TRMKQIHASGTKVVAEAGAAIIATTKVACGASLTGLEFAAGIPGSVGGAIFMNAGAYGGEMSEVVETVTVLTPAGQLKTL DHDELDFGYRHSTIQDYDDIVVSVTFGLKPGNQTKIQARMDELNTLRAAKQPLEWPSCGSVFKRPTGYFTGKLIHDAGLQ GHRIGGAEVSKKHAGFIINVDHATATDYMDMIHYVQKVVFERFGVHLQTEVRIIGEDVVQG
Specific function: Cell wall formation
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURB_LACPL (Q88YF4)
Other databases:
- EMBL: AL935254 - RefSeq: NP_784556.1 - ProteinModelPortal: Q88YF4 - SMR: Q88YF4 - GeneID: 1063918 - GenomeReviews: AL935263_GR - KEGG: lpl:lp_0814 - NMPDR: fig|220668.1.peg.690 - HOGENOM: HBG686573 - OMA: SKKHAGF - ProtClustDB: PRK13905 - BioCyc: LPLA220668:LP_0814-MONOMER - BRENDA: 1.1.1.158 - GO: GO:0005737 - HAMAP: MF_00037 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 - Gene3D: G3DSA:3.30.465.10 - Gene3D: G3DSA:3.30.43.10 - Gene3D: G3DSA:3.90.78.10 - PANTHER: PTHR21071 - TIGRFAMs: TIGR00179
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C; SSF56176 FAD-binding_2; SSF56194 MurB_C
EC number: =1.1.1.158
Molecular weight: Translated: 32418; Mature: 32287
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: PS51387 FAD_PCMH
Important sites: ACT_SITE 171-171 ACT_SITE 221-221 ACT_SITE 291-291
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKDVLATFPAIEIKKNESLSHYTNTKTGGPADYVRFPKSISETKALITFANEQNLPLTV CCCCHHHHCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCHHHCCEEEEEEECCCCCCEEE IGNASNLIVKDGGIRGLTIILTRMKQIHASGTKVVAEAGAAIIATTKVACGASLTGLEFA EECCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEHHCCCEEEEEEEHHCCCCCCCCHHH AGIPGSVGGAIFMNAGAYGGEMSEVVETVTVLTPAGQLKTLDHDELDFGYRHSTIQDYDD CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCC IVVSVTFGLKPGNQTKIQARMDELNTLRAAKQPLEWPSCGSVFKRPTGYFTGKLIHDAGL EEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCEEEEEEECCCC QGHRIGGAEVSKKHAGFIINVDHATATDYMDMIHYVQKVVFERFGVHLQTEVRIIGEDVV CCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECHHHC QG CC >Mature Secondary Structure TKDVLATFPAIEIKKNESLSHYTNTKTGGPADYVRFPKSISETKALITFANEQNLPLTV CCCHHHHCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCHHHCCEEEEEEECCCCCCEEE IGNASNLIVKDGGIRGLTIILTRMKQIHASGTKVVAEAGAAIIATTKVACGASLTGLEFA EECCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEHHCCCEEEEEEEHHCCCCCCCCHHH AGIPGSVGGAIFMNAGAYGGEMSEVVETVTVLTPAGQLKTLDHDELDFGYRHSTIQDYDD CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCC IVVSVTFGLKPGNQTKIQARMDELNTLRAAKQPLEWPSCGSVFKRPTGYFTGKLIHDAGL EEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCEEEEEEECCCC QGHRIGGAEVSKKHAGFIINVDHATATDYMDMIHYVQKVVFERFGVHLQTEVRIIGEDVV CCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECHHHC QG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12566566