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The map label for this gene is whiA

Identifier: 28377636

GI number: 28377636

Start: 716410

End: 717342

Strand: Direct

Name: whiA

Synonym: lp_0781

Alternate gene names: 28377636

Gene position: 716410-717342 (Clockwise)

Preceding gene: 28377635

Following gene: 28377637

Centisome position: 21.66

GC content: 42.87

Gene sequence:

>933_bases
ATGTCATACGCCAGTGACGTTAAGAAAGAATTGACTAACCTCGCTGTCCATCGCGAGAATGCTAAGGCTGAATTAATGGC
TTTGATTCGAATGAATGGGGCGATCAGCATTGCTAATCATCACTTCATTTTGAATATTCAGACGGAAAATCCGGCCATCG
CGCGGCGTATTTACCGGCTACTCAAACAATTTTATGACGTCGATAGTGAATTGATTGTTCGGCGCAAAATGAAATTAAAT
AAGAATAATTTGTACATCGTACGATTGAAGACCGGTACGGACATGGTACTCGCTGATTTGGGTATCTTAAAGGATTATCA
AATCGTTGAAGTGGCACCAACTGAAGTGTTAACGGATGATGCTGCGGTGCGTTCTTATTTGCGTGGCGCCTTTTTAGCGG
GCGGTTCGGTTAATAATCCTGAAACTTCCCGGTATCATTTGGAAATTTACTCACTGTATGAGGAACATAATCATATGATC
TCCGAGATGATGAATCAGTATGGCTTGAATTCACGAACGACTGATCGGCGTGGTGGTTTTATTACGTACATCAAGGAAGC
GGAAAAAATTGCCGACTTCTTGTCATTGGTTGGTGCGACCAATGCCATGCTTAAGTTTGAAGATATTCGAATCATGCGGG
ACATGCGTAACTCGGTCAATCGGTTGGTTAACTGTGAGAACGCCAACATGGATAAGGTTGCCAATGCCTCTAGCAAACAG
ATTGAAAATATTTTATTGATCGATGCTACGGTGGGATTACAACAGTTACCACCAAAATTACAAGAAGTCGCTGTTGCCCG
GTTGGAACATCGTGAAGTTAGCCTCAAGGAACTAGGAACCCTTGTTCCGGGCGGGCCGATTTCTAAGTCTGGAATCAATC
ATCGGCTGCGTAAAATCAATCAATTTGCGGAACAATTACAAAAAGATGCTTAG

Upstream 100 bases:

>100_bases
ACTCCGTGATAATGGGGCCTTTCATGATGGCGACCAAGTTGTCGCTGAATTAATGAATCTAGTCGGTCATTCCGACGTTT
TCAGATAAGGGGGTCGTGGC

Downstream 100 bases:

>100_bases
TTGTCGATAAGGATGGCTTAAGCATGAGTTTTGTTGAAAAGCTTGCTAACCATTTTAGATGGTGTTAGCGGCTTTTTTGG
GTTGAAATGGATTGATTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MSYASDVKKELTNLAVHRENAKAELMALIRMNGAISIANHHFILNIQTENPAIARRIYRLLKQFYDVDSELIVRRKMKLN
KNNLYIVRLKTGTDMVLADLGILKDYQIVEVAPTEVLTDDAAVRSYLRGAFLAGGSVNNPETSRYHLEIYSLYEEHNHMI
SEMMNQYGLNSRTTDRRGGFITYIKEAEKIADFLSLVGATNAMLKFEDIRIMRDMRNSVNRLVNCENANMDKVANASSKQ
IENILLIDATVGLQQLPPKLQEVAVARLEHREVSLKELGTLVPGGPISKSGINHRLRKINQFAEQLQKDA

Sequences:

>Translated_310_residues
MSYASDVKKELTNLAVHRENAKAELMALIRMNGAISIANHHFILNIQTENPAIARRIYRLLKQFYDVDSELIVRRKMKLN
KNNLYIVRLKTGTDMVLADLGILKDYQIVEVAPTEVLTDDAAVRSYLRGAFLAGGSVNNPETSRYHLEIYSLYEEHNHMI
SEMMNQYGLNSRTTDRRGGFITYIKEAEKIADFLSLVGATNAMLKFEDIRIMRDMRNSVNRLVNCENANMDKVANASSKQ
IENILLIDATVGLQQLPPKLQEVAVARLEHREVSLKELGTLVPGGPISKSGINHRLRKINQFAEQLQKDA
>Mature_309_residues
SYASDVKKELTNLAVHRENAKAELMALIRMNGAISIANHHFILNIQTENPAIARRIYRLLKQFYDVDSELIVRRKMKLNK
NNLYIVRLKTGTDMVLADLGILKDYQIVEVAPTEVLTDDAAVRSYLRGAFLAGGSVNNPETSRYHLEIYSLYEEHNHMIS
EMMNQYGLNSRTTDRRGGFITYIKEAEKIADFLSLVGATNAMLKFEDIRIMRDMRNSVNRLVNCENANMDKVANASSKQI
ENILLIDATVGLQQLPPKLQEVAVARLEHREVSLKELGTLVPGGPISKSGINHRLRKINQFAEQLQKDA

Specific function: May be required for sporulation

COG id: COG1481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the whiA transcriptional regulatory family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): WHIA_LACPL (Q88YI2)

Other databases:

- EMBL:   AL935254
- RefSeq:   NP_784528.1
- ProteinModelPortal:   Q88YI2
- GeneID:   1063776
- GenomeReviews:   AL935263_GR
- KEGG:   lpl:lp_0781
- NMPDR:   fig|220668.1.peg.662
- HOGENOM:   HBG485718
- OMA:   VTCPGPE
- ProtClustDB:   CLSK821231
- BioCyc:   LPLA220668:LP_0781-MONOMER
- GO:   GO:0006350
- HAMAP:   MF_01420
- InterPro:   IPR003802
- InterPro:   IPR023054
- InterPro:   IPR018478
- TIGRFAMs:   TIGR00647

Pfam domain/function: PF02650 HTH_WhiA; PF10298 WhiA_N

EC number: NA

Molecular weight: Translated: 35113; Mature: 34982

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYASDVKKELTNLAVHRENAKAELMALIRMNGAISIANHHFILNIQTENPAIARRIYRL
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCEEEEEEECCCHHHHHHHHHH
LKQFYDVDSELIVRRKMKLNKNNLYIVRLKTGTDMVLADLGILKDYQIVEVAPTEVLTDD
HHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCEEEEECCHHHHCCH
AAVRSYLRGAFLAGGSVNNPETSRYHLEIYSLYEEHNHMISEMMNQYGLNSRTTDRRGGF
HHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE
ITYIKEAEKIADFLSLVGATNAMLKFEDIRIMRDMRNSVNRLVNCENANMDKVANASSKQ
EHHHHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHH
IENILLIDATVGLQQLPPKLQEVAVARLEHREVSLKELGTLVPGGPISKSGINHRLRKIN
HCEEEEEEECCCHHHCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHH
QFAEQLQKDA
HHHHHHHHCC
>Mature Secondary Structure 
SYASDVKKELTNLAVHRENAKAELMALIRMNGAISIANHHFILNIQTENPAIARRIYRL
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCEEEEEEECCCHHHHHHHHHH
LKQFYDVDSELIVRRKMKLNKNNLYIVRLKTGTDMVLADLGILKDYQIVEVAPTEVLTDD
HHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCEEEEECCHHHHCCH
AAVRSYLRGAFLAGGSVNNPETSRYHLEIYSLYEEHNHMISEMMNQYGLNSRTTDRRGGF
HHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE
ITYIKEAEKIADFLSLVGATNAMLKFEDIRIMRDMRNSVNRLVNCENANMDKVANASSKQ
EHHHHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHH
IENILLIDATVGLQQLPPKLQEVAVARLEHREVSLKELGTLVPGGPISKSGINHRLRKIN
HCEEEEEEECCCHHHCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHH
QFAEQLQKDA
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12566566